BLASTX nr result

ID: Panax21_contig00005229 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005229
         (1253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532714.1| conserved hypothetical protein [Ricinus comm...   255   2e-65
ref|XP_002308785.1| predicted protein [Populus trichocarpa] gi|2...   245   1e-62
ref|XP_002322733.1| predicted protein [Populus trichocarpa] gi|2...   238   2e-60
ref|XP_002272059.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-...   231   2e-58
emb|CBI33105.3| unnamed protein product [Vitis vinifera]              229   9e-58

>ref|XP_002532714.1| conserved hypothetical protein [Ricinus communis]
            gi|223527541|gb|EEF29663.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 876

 Score =  255 bits (651), Expect = 2e-65
 Identities = 127/240 (52%), Positives = 170/240 (70%), Gaps = 1/240 (0%)
 Frame = -3

Query: 1251 LLRRASQDDAMYKLCRRSLGSMVEYIGIGRGTTTKN-GDSNKTVIAFQDIFPIVSELAAK 1075
            LLR  + +D +Y  CR SLGS++E +G+ RG      G  +   +  QDIFP VSELA +
Sbjct: 301  LLRNVAYNDPLYLCCRSSLGSLLESMGVSRGLVKYGCGAEDVKGLIIQDIFPFVSELAGR 360

Query: 1074 LTHDLTVTVESEKEVGPLLVDVHDFTAFLLPLRTVIKEQVAFGSPISMPFREVGYNVPCY 895
            L+ +L  TV+SE  +GPL  DV DF+AFLLPL T I+EQV F  PISMP  + G++ P Y
Sbjct: 361  LSAELESTVKSETSLGPLASDVRDFSAFLLPLHTTIREQVGFRGPISMPLDKSGFSHPLY 420

Query: 894  GEEIKFLYVIFFDLLEKIDLCLGRVEEYLVVKEKGEGEILRLGWCHYLAILKELYNISKL 715
             EEI+ LY IF DL+ K+D CL ++E++L +K  GEGE     W  YLAILKEL NI+K 
Sbjct: 421  AEEIENLYDIFVDLMMKMDWCLTKMEDFLPMKPNGEGESACTRWSQYLAILKELNNIAKH 480

Query: 714  YQGAEKQFWEKLRHRKVSVCYLIIRYAKRSDDHRWILEHKEVTNFECRRHLAMMLLPEVK 535
            Y+ AE++FW  L+  K S+C LI++YAKR+DD++W+L+HK+VT+FE RRHLAMM+ PEVK
Sbjct: 481  YKKAEEEFWSVLKRTKASLCVLIVKYAKRNDDNQWLLQHKDVTDFESRRHLAMMMFPEVK 540



 Score =  219 bits (558), Expect = 1e-54
 Identities = 103/126 (81%), Positives = 114/126 (90%)
 Frame = -1

Query: 380 GLFLEFKNEEATGPGVLREWFFLVCQEIFNPQNALFVACPNDRRRFFPNPASKVDPLHLE 201
           GLF+EFKNEEATGPGVLREWFFLV Q +FN QNALFVACPNDRRRFFPNPASKV+PLHL+
Sbjct: 575 GLFMEFKNEEATGPGVLREWFFLVVQALFNQQNALFVACPNDRRRFFPNPASKVEPLHLD 634

Query: 200 YFTFSGRVIALALMHNVQVGIVFDRIFFLQLAEMNVSLEDIRDADPFLYSSCKKILEMDP 21
           YFTF GRVIALALMH VQVGIVFDR+FFLQLA  ++SLEDIRDADP LY+SCK++LEMD 
Sbjct: 635 YFTFCGRVIALALMHKVQVGIVFDRVFFLQLAGRHISLEDIRDADPCLYTSCKQVLEMDA 694

Query: 20  ETVDQD 3
             +D D
Sbjct: 695 NFIDSD 700


>ref|XP_002308785.1| predicted protein [Populus trichocarpa] gi|222854761|gb|EEE92308.1|
            predicted protein [Populus trichocarpa]
          Length = 633

 Score =  245 bits (626), Expect = 1e-62
 Identities = 124/239 (51%), Positives = 170/239 (71%)
 Frame = -3

Query: 1251 LLRRASQDDAMYKLCRRSLGSMVEYIGIGRGTTTKNGDSNKTVIAFQDIFPIVSELAAKL 1072
            LLR+   DD +Y +CR  LGS++E  G   G     G+  K V+  Q+IFP VSEL +KL
Sbjct: 307  LLRKVGSDDPLYVVCRSCLGSLLENGGGTCGWRYHGGEEGKGVV-MQEIFPFVSELGSKL 365

Query: 1071 THDLTVTVESEKEVGPLLVDVHDFTAFLLPLRTVIKEQVAFGSPISMPFREVGYNVPCYG 892
            + DLT +V   + +GP    V DF+AFL+PL +VI EQ  FGSPISMP ++  +N P Y 
Sbjct: 366  SKDLTGSVA--ESMGPSEAVVKDFSAFLIPLHSVISEQRGFGSPISMPLKKRAFNCPLYA 423

Query: 891  EEIKFLYVIFFDLLEKIDLCLGRVEEYLVVKEKGEGEILRLGWCHYLAILKELYNISKLY 712
            +EI+ L+VIF DLL+ ++ CL ++++   +K  GEGE+   GW  YL ILKEL NI+KLY
Sbjct: 424  KEIEQLHVIFIDLLDIMEKCLEKMQDSSNLKTNGEGELNHTGWSQYLFILKELNNIAKLY 483

Query: 711  QGAEKQFWEKLRHRKVSVCYLIIRYAKRSDDHRWILEHKEVTNFECRRHLAMMLLPEVK 535
            +GAE++FW  LR RK S+C LI+RYAKR+DDH+W+L+HK+VT+F+ RRHLAMM+ PE+K
Sbjct: 484  KGAEEKFWTVLRLRKASLCVLIVRYAKRTDDHQWLLQHKDVTDFDSRRHLAMMMFPELK 542



 Score =  100 bits (248), Expect = 1e-18
 Identities = 44/50 (88%), Positives = 48/50 (96%)
 Frame = -1

Query: 380 GLFLEFKNEEATGPGVLREWFFLVCQEIFNPQNALFVACPNDRRRFFPNP 231
           GLF+EFKNEEATGPGVLREWFFLV Q IF+PQNALFVACP+DRRRF+PNP
Sbjct: 577 GLFMEFKNEEATGPGVLREWFFLVTQAIFDPQNALFVACPSDRRRFYPNP 626


>ref|XP_002322733.1| predicted protein [Populus trichocarpa] gi|222867363|gb|EEF04494.1|
            predicted protein [Populus trichocarpa]
          Length = 592

 Score =  238 bits (608), Expect = 2e-60
 Identities = 123/241 (51%), Positives = 167/241 (69%), Gaps = 2/241 (0%)
 Frame = -3

Query: 1251 LLRRASQDDAMYKLCRRSLGSMVEYIGIGRGTT--TKNGDSNKTVIAFQDIFPIVSELAA 1078
            LLR+   DD +Y +CR  LGS++E    GRGT     +G+        Q+IFP VSEL +
Sbjct: 259  LLRKVGSDDPLYVVCRSCLGSLLEN---GRGTCGWRYHGEEEGKGAVVQEIFPFVSELGS 315

Query: 1077 KLTHDLTVTVESEKEVGPLLVDVHDFTAFLLPLRTVIKEQVAFGSPISMPFREVGYNVPC 898
            KL  DL  +V   + +GP   DV DF+AFL+PL +VI EQ  F SPISMP  ++ ++ P 
Sbjct: 316  KLFKDLMGSVV--ESMGPSEADVKDFSAFLIPLHSVISEQRGFRSPISMPLNKLAFHCPL 373

Query: 897  YGEEIKFLYVIFFDLLEKIDLCLGRVEEYLVVKEKGEGEILRLGWCHYLAILKELYNISK 718
            Y +EI+ L+VIF DLL  ++ CLG++++   +K  GE E+   GW  YL ILKEL NI+K
Sbjct: 374  YAKEIEQLHVIFIDLLNIMEKCLGKMQDSSNLKTNGESELNHTGWSQYLFILKELNNIAK 433

Query: 717  LYQGAEKQFWEKLRHRKVSVCYLIIRYAKRSDDHRWILEHKEVTNFECRRHLAMMLLPEV 538
            LY+GAE++FW  LR RK S+C LI+RYAK++DDH+W+L+HK+VT+FE RRHLAMM+ PEV
Sbjct: 434  LYKGAEEKFWTVLRLRKASLCALIVRYAKQTDDHQWLLQHKDVTDFESRRHLAMMMFPEV 493

Query: 537  K 535
            K
Sbjct: 494  K 494



 Score = 97.4 bits (241), Expect = 7e-18
 Identities = 43/49 (87%), Positives = 47/49 (95%)
 Frame = -1

Query: 380 GLFLEFKNEEATGPGVLREWFFLVCQEIFNPQNALFVACPNDRRRFFPN 234
           GLF+EFKNEEATGPGVLREWFFLV Q IF+PQNALFVACP+DRRRF+PN
Sbjct: 529 GLFMEFKNEEATGPGVLREWFFLVTQAIFDPQNALFVACPSDRRRFYPN 577


>ref|XP_002272059.1| PREDICTED: E3 ubiquitin-protein ligase UPL5-like [Vitis vinifera]
          Length = 893

 Score =  231 bits (590), Expect = 2e-58
 Identities = 127/253 (50%), Positives = 168/253 (66%), Gaps = 14/253 (5%)
 Frame = -3

Query: 1251 LLRRASQDDAMYKLCRRSLGSMVEYIGIGRGTTTKNGDSNKTVIAFQDIFPIVSELAAKL 1072
            LL R   +D +Y  CR +LGS+VE +G+ R +  +   ++KT+I  ++I P VSELA+ L
Sbjct: 279  LLSRTDHEDPLYLTCRSTLGSLVENVGVVRAS--RYCHNSKTLIVVKEILPFVSELASSL 336

Query: 1071 THDLTVTVESEKEVG-------------PLLVDVHDFTAFLLPLRTVIKEQVAFGSPISM 931
            +  L  ++ES    G              L  DV DFTAFL P+R+VI EQV+F  PIS+
Sbjct: 337  SKSLISSMESAGSTGNSLNDGRNLIAGHTLANDVRDFTAFLHPVRSVIMEQVSFHGPISI 396

Query: 930  PFREVGYNVPCYGEEIKFLYVIFFDLLEKIDLCLGRVEEYLVVKEKGEGEI-LRLGWCHY 754
            P  E G   P YGEEI+FL+ IF DL+ K+D CL ++E+ L     GEG +     W  Y
Sbjct: 397  PLGERGSTNPWYGEEIEFLHGIFIDLMTKMDGCLHKMEQCLA----GEGGVDHHTVWPQY 452

Query: 753  LAILKELYNISKLYQGAEKQFWEKLRHRKVSVCYLIIRYAKRSDDHRWILEHKEVTNFEC 574
            LA+LKEL +ISKLY GAE++FW  +R RK++VC L+IRYAKRSDDH W+LEHK+VT+FE 
Sbjct: 453  LAVLKELNSISKLYHGAEEEFWTFMRRRKIAVCSLMIRYAKRSDDHSWLLEHKDVTDFES 512

Query: 573  RRHLAMMLLPEVK 535
            RRHLAMM+ PEVK
Sbjct: 513  RRHLAMMMFPEVK 525



 Score =  229 bits (585), Expect = 9e-58
 Identities = 106/126 (84%), Positives = 119/126 (94%)
 Frame = -1

Query: 380 GLFLEFKNEEATGPGVLREWFFLVCQEIFNPQNALFVACPNDRRRFFPNPASKVDPLHLE 201
           GLF+EFKNEEATGPGVLREWFFLVCQEIFNPQNALFVACPNDRRRFFPNPAS+VDP+HL+
Sbjct: 560 GLFMEFKNEEATGPGVLREWFFLVCQEIFNPQNALFVACPNDRRRFFPNPASEVDPMHLQ 619

Query: 200 YFTFSGRVIALALMHNVQVGIVFDRIFFLQLAEMNVSLEDIRDADPFLYSSCKKILEMDP 21
           YF FSGRVIALALMH VQVG+VFDR+FFLQLA M++SLEDI+DADP LY+SCK+IL+MD 
Sbjct: 620 YFRFSGRVIALALMHKVQVGVVFDRVFFLQLAGMDISLEDIQDADPLLYTSCKQILDMDA 679

Query: 20  ETVDQD 3
           E +D D
Sbjct: 680 EFMDSD 685


>emb|CBI33105.3| unnamed protein product [Vitis vinifera]
          Length = 831

 Score =  229 bits (585), Expect = 9e-58
 Identities = 106/126 (84%), Positives = 119/126 (94%)
 Frame = -1

Query: 380 GLFLEFKNEEATGPGVLREWFFLVCQEIFNPQNALFVACPNDRRRFFPNPASKVDPLHLE 201
           GLF+EFKNEEATGPGVLREWFFLVCQEIFNPQNALFVACPNDRRRFFPNPAS+VDP+HL+
Sbjct: 498 GLFMEFKNEEATGPGVLREWFFLVCQEIFNPQNALFVACPNDRRRFFPNPASEVDPMHLQ 557

Query: 200 YFTFSGRVIALALMHNVQVGIVFDRIFFLQLAEMNVSLEDIRDADPFLYSSCKKILEMDP 21
           YF FSGRVIALALMH VQVG+VFDR+FFLQLA M++SLEDI+DADP LY+SCK+IL+MD 
Sbjct: 558 YFRFSGRVIALALMHKVQVGVVFDRVFFLQLAGMDISLEDIQDADPLLYTSCKQILDMDA 617

Query: 20  ETVDQD 3
           E +D D
Sbjct: 618 EFMDSD 623



 Score =  202 bits (515), Expect = 1e-49
 Identities = 117/253 (46%), Positives = 157/253 (62%), Gaps = 14/253 (5%)
 Frame = -3

Query: 1251 LLRRASQDDAMYKLCRRSLGSMVEYIGIGRGTTTKNGDSNKTVIAFQDIFPIVSELAAKL 1072
            LL R   +D +Y  CR +LGS+VE +G+ R +  +   ++KT+I  ++I P VSELA+ L
Sbjct: 236  LLSRTDHEDPLYLTCRSTLGSLVENVGVVRAS--RYCHNSKTLIVVKEILPFVSELASSL 293

Query: 1071 THDLTVTVESEKEVG-------------PLLVDVHDFTAFLLPLRTVIKEQVAFGSPISM 931
            +  L  ++ES    G              L  DV DFTAFL P+R+VI EQV+F      
Sbjct: 294  SKSLISSMESAGSTGNSLNDGRNLIAGHTLANDVRDFTAFLHPVRSVIMEQVSF------ 347

Query: 930  PFREVGYNVPCYGEEIKFLYVIFFDLLEKIDLCLGRVEEYLVVKEKGEGEI-LRLGWCHY 754
                          EI+FL+ IF DL+ K+D CL ++E+ L     GEG +     W  Y
Sbjct: 348  -------------HEIEFLHGIFIDLMTKMDGCLHKMEQCLA----GEGGVDHHTVWPQY 390

Query: 753  LAILKELYNISKLYQGAEKQFWEKLRHRKVSVCYLIIRYAKRSDDHRWILEHKEVTNFEC 574
            LA+LKEL +ISKLY GAE++FW  +R RK++VC L+IRYAKRSDDH W+LEHK+VT+FE 
Sbjct: 391  LAVLKELNSISKLYHGAEEEFWTFMRRRKIAVCSLMIRYAKRSDDHSWLLEHKDVTDFES 450

Query: 573  RRHLAMMLLPEVK 535
            RRHLAMM+ PEVK
Sbjct: 451  RRHLAMMMFPEVK 463


Top