BLASTX nr result

ID: Panax21_contig00005221 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005221
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135046.1| PREDICTED: charged multivesicular body prote...   125   3e-27
ref|XP_002518614.1| Charged multivesicular body protein, putativ...   117   7e-25
ref|XP_002316482.1| predicted protein [Populus trichocarpa] gi|2...   117   7e-25
ref|XP_002310998.1| predicted protein [Populus trichocarpa] gi|2...   116   2e-24
ref|XP_003591677.1| Charged multivesicular body protein [Medicag...   113   2e-23

>ref|XP_004135046.1| PREDICTED: charged multivesicular body protein 5-like [Cucumis
           sativus] gi|449522013|ref|XP_004168023.1| PREDICTED:
           charged multivesicular body protein 5-like [Cucumis
           sativus]
          Length = 237

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/71 (81%), Positives = 64/71 (90%)
 Frame = -3

Query: 493 ELDALEADMGLETESDGVPSYLQPDKESDFDAELNLPSAPVGQSAIPAGRGNGQAEDEFG 314
           ELDALEADMG ETE+DGVPSYLQPDKESDF+ ELNLP+AP+G +A+PAGR N QAEDE G
Sbjct: 167 ELDALEADMGFETEADGVPSYLQPDKESDFEGELNLPAAPIGHAAVPAGRNNAQAEDELG 226

Query: 313 LPPVPHASLRG 281
           LP VPHASLRG
Sbjct: 227 LPAVPHASLRG 237


>ref|XP_002518614.1| Charged multivesicular body protein, putative [Ricinus communis]
           gi|223542213|gb|EEF43756.1| Charged multivesicular body
           protein, putative [Ricinus communis]
          Length = 237

 Score =  117 bits (294), Expect = 7e-25
 Identities = 57/71 (80%), Positives = 60/71 (84%)
 Frame = -3

Query: 493 ELDALEADMGLETESDGVPSYLQPDKESDFDAELNLPSAPVGQSAIPAGRGNGQAEDEFG 314
           ELDALEADMGLE E DGVPSYLQPDKE D D+ELNLPSAP GQ+A PAGR N QAEDE G
Sbjct: 167 ELDALEADMGLEIEGDGVPSYLQPDKEPDLDSELNLPSAPTGQAAGPAGRNNAQAEDELG 226

Query: 313 LPPVPHASLRG 281
           LP VP AS+RG
Sbjct: 227 LPAVPRASIRG 237


>ref|XP_002316482.1| predicted protein [Populus trichocarpa] gi|222865522|gb|EEF02653.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  117 bits (294), Expect = 7e-25
 Identities = 60/71 (84%), Positives = 61/71 (85%)
 Frame = -3

Query: 493 ELDALEADMGLETESDGVPSYLQPDKESDFDAELNLPSAPVGQSAIPAGRGNGQAEDEFG 314
           ELDALEADMG+ETESDGVPSYLQPDKESD DAELNLPSAP GQ A PA R N QAEDE G
Sbjct: 167 ELDALEADMGMETESDGVPSYLQPDKESDLDAELNLPSAPTGQGA-PASRYNAQAEDELG 225

Query: 313 LPPVPHASLRG 281
           LP VP ASLRG
Sbjct: 226 LPAVPRASLRG 236


>ref|XP_002310998.1| predicted protein [Populus trichocarpa] gi|222850818|gb|EEE88365.1|
           predicted protein [Populus trichocarpa]
          Length = 236

 Score =  116 bits (291), Expect = 2e-24
 Identities = 58/71 (81%), Positives = 61/71 (85%)
 Frame = -3

Query: 493 ELDALEADMGLETESDGVPSYLQPDKESDFDAELNLPSAPVGQSAIPAGRGNGQAEDEFG 314
           ELDALEADM +ETESDGVPSYLQPDKE DFD+ELNLPSAP G +A PAGR N QAEDE G
Sbjct: 167 ELDALEADMAMETESDGVPSYLQPDKEPDFDSELNLPSAPTGHAA-PAGRANNQAEDELG 225

Query: 313 LPPVPHASLRG 281
           LP VP ASLRG
Sbjct: 226 LPAVPRASLRG 236


>ref|XP_003591677.1| Charged multivesicular body protein [Medicago truncatula]
           gi|358346039|ref|XP_003637080.1| Charged multivesicular
           body protein [Medicago truncatula]
           gi|217073037|gb|ACJ84878.1| unknown [Medicago
           truncatula] gi|355480725|gb|AES61928.1| Charged
           multivesicular body protein [Medicago truncatula]
           gi|355503015|gb|AES84218.1| Charged multivesicular body
           protein [Medicago truncatula]
           gi|388511871|gb|AFK43997.1| unknown [Medicago
           truncatula]
          Length = 235

 Score =  113 bits (282), Expect = 2e-23
 Identities = 56/71 (78%), Positives = 60/71 (84%)
 Frame = -3

Query: 493 ELDALEADMGLETESDGVPSYLQPDKESDFDAELNLPSAPVGQSAIPAGRGNGQAEDEFG 314
           ELDALEADM  E ES+GVPSYLQPDKESDFD+ELNLPSAP GQ+A+P GR N Q EDE G
Sbjct: 167 ELDALEADM--ENESEGVPSYLQPDKESDFDSELNLPSAPTGQTAVPHGRANAQTEDELG 224

Query: 313 LPPVPHASLRG 281
           LP VP ASLRG
Sbjct: 225 LPAVPRASLRG 235


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