BLASTX nr result

ID: Panax21_contig00005208 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005208
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269448.1| PREDICTED: uncharacterized WD repeat-contain...   261   9e-68
ref|XP_003532316.1| PREDICTED: WD repeat-containing protein 36-l...   238   6e-61
ref|XP_004163055.1| PREDICTED: uncharacterized WD repeat-contain...   235   4e-60
ref|XP_004152858.1| PREDICTED: uncharacterized WD repeat-contain...   235   4e-60
ref|XP_003516969.1| PREDICTED: uncharacterized WD repeat-contain...   234   7e-60

>ref|XP_002269448.1| PREDICTED: uncharacterized WD repeat-containing protein C1672.07
           isoform 1 [Vitis vinifera] gi|297740341|emb|CBI30523.3|
           unnamed protein product [Vitis vinifera]
          Length = 905

 Score =  261 bits (666), Expect = 9e-68
 Identities = 123/155 (79%), Positives = 137/155 (88%)
 Frame = +2

Query: 146 GPQLPKKIWALASYRDYRFAAYGNDIAVYKQAHQVATWSRHTVKVNQLLLF*EHILSVDV 325
           GPQLPKKI ALASYRDY FAAYGNDIAV+K+AHQVATWSRH  KVN LLLF E ILS+DV
Sbjct: 52  GPQLPKKIRALASYRDYTFAAYGNDIAVFKRAHQVATWSRHNAKVNLLLLFGEQILSIDV 111

Query: 326 EGNIFTWAF*RIDQNLAQIGHILLED*FTPSCIMHPDTYLNKVLLGSQEGALQLWNNSTK 505
            GN+F WAF  I QNLA IGH++LED F+PSCIMHPDTYLNKV+LGS+EG+LQLWN STK
Sbjct: 112 GGNMFMWAFKGIQQNLAPIGHVMLEDKFSPSCIMHPDTYLNKVILGSEEGSLQLWNISTK 171

Query: 506 KMLFEFKGWKSSICCCVSSPALDVLTVGCSDGKIH 610
           + L+EFKGWKSSICCCVSSPALDV+ VGC+DG IH
Sbjct: 172 QKLYEFKGWKSSICCCVSSPALDVVAVGCADGTIH 206



 Score = 78.2 bits (191), Expect = 1e-12
 Identities = 41/78 (52%), Positives = 45/78 (57%), Gaps = 23/78 (29%)
 Frame = +3

Query: 3   ACTISTCGNFAVLGTASGWIKRL-----------------------GEAVGITCDSTNTL 113
           AC IS CGNFAVLGTA GWI+R                        GE VG+ CDSTNTL
Sbjct: 429 ACAISACGNFAVLGTAGGWIERFNLQSGISRGSYVDLSERRSCAHDGEVVGVACDSTNTL 488

Query: 114 MISAGYHGDIKALNCQRR 167
           MISAGYHGDIK  + + R
Sbjct: 489 MISAGYHGDIKVWDFKGR 506


>ref|XP_003532316.1| PREDICTED: WD repeat-containing protein 36-like [Glycine max]
          Length = 907

 Score =  238 bits (607), Expect = 6e-61
 Identities = 109/155 (70%), Positives = 130/155 (83%)
 Frame = +2

Query: 146 GPQLPKKIWALASYRDYRFAAYGNDIAVYKQAHQVATWSRHTVKVNQLLLF*EHILSVDV 325
           GPQLPKKI ALASYR+Y FAAYGN+IAV+K+AHQVATWS H  KV  LLLF +HI+SVD 
Sbjct: 52  GPQLPKKISALASYREYTFAAYGNNIAVFKRAHQVATWSSHNAKVKLLLLFGDHIVSVDA 111

Query: 326 EGNIFTWAF*RIDQNLAQIGHILLED*FTPSCIMHPDTYLNKVLLGSQEGALQLWNNSTK 505
            GN+F W F  ID+NL   GHI+L++ F+PSCIMHPDTYLNKVL+GS++G +QLWN STK
Sbjct: 112 RGNMFLWPFKGIDENLFPFGHIMLDEKFSPSCIMHPDTYLNKVLVGSEQGPMQLWNISTK 171

Query: 506 KMLFEFKGWKSSICCCVSSPALDVLTVGCSDGKIH 610
           K +FEFKGW S I CCVSSPALDV+ +GC+DG+IH
Sbjct: 172 KKIFEFKGWNSPISCCVSSPALDVVAIGCTDGRIH 206



 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 39/78 (50%), Positives = 42/78 (53%), Gaps = 23/78 (29%)
 Frame = +3

Query: 3   ACTISTCGNFAVLGTASGWIKRL-----------------------GEAVGITCDSTNTL 113
           AC IS CGNF  LGTA GWI+R                        GE VG+ CDSTNTL
Sbjct: 429 ACAISACGNFVFLGTAGGWIERFNLQSGIRRGAYIDISESRNCAHDGEVVGVACDSTNTL 488

Query: 114 MISAGYHGDIKALNCQRR 167
           MISAGY GDIK  N + R
Sbjct: 489 MISAGYKGDIKVWNFKER 506


>ref|XP_004163055.1| PREDICTED: uncharacterized WD repeat-containing protein
           C1672.07-like [Cucumis sativus]
          Length = 891

 Score =  235 bits (600), Expect = 4e-60
 Identities = 107/155 (69%), Positives = 130/155 (83%)
 Frame = +2

Query: 146 GPQLPKKIWALASYRDYRFAAYGNDIAVYKQAHQVATWSRHTVKVNQLLLF*EHILSVDV 325
           GPQLPKKI ALASYR+Y FAAYG+DIAV+K+AHQVA WS H  KVN LLLF +HILSVD+
Sbjct: 52  GPQLPKKIRALASYREYTFAAYGSDIAVFKRAHQVANWSSHKAKVNLLLLFGDHILSVDI 111

Query: 326 EGNIFTWAF*RIDQNLAQIGHILLED*FTPSCIMHPDTYLNKVLLGSQEGALQLWNNSTK 505
            GN+F W F  I+ + + +G ++L   F+PSCIMHPDTYLNKV+LGS EG+L+LWN S+K
Sbjct: 112 NGNMFMWPFKGIEDSQSPVGQVILGRKFSPSCIMHPDTYLNKVILGSLEGSLELWNISSK 171

Query: 506 KMLFEFKGWKSSICCCVSSPALDVLTVGCSDGKIH 610
           K LFEFKGW SS+CCCVSSPALDV+ +GC+DGK+H
Sbjct: 172 KKLFEFKGWNSSVCCCVSSPALDVVAIGCADGKVH 206



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 37/78 (47%), Positives = 42/78 (53%), Gaps = 23/78 (29%)
 Frame = +3

Query: 3   ACTISTCGNFAVLGTASGWIKR-----------------------LGEAVGITCDSTNTL 113
           AC IS CGNFA LGT  GWI+R                       +GE VG+ CDSTNT 
Sbjct: 429 ACAISACGNFAFLGTEGGWIERFNLQSGASRGSYLDKMEGGSCAHVGEVVGLACDSTNTH 488

Query: 114 MISAGYHGDIKALNCQRR 167
           +ISAG HGDIK  N + R
Sbjct: 489 VISAGVHGDIKVWNFKER 506


>ref|XP_004152858.1| PREDICTED: uncharacterized WD repeat-containing protein
           C1672.07-like [Cucumis sativus]
          Length = 891

 Score =  235 bits (600), Expect = 4e-60
 Identities = 107/155 (69%), Positives = 130/155 (83%)
 Frame = +2

Query: 146 GPQLPKKIWALASYRDYRFAAYGNDIAVYKQAHQVATWSRHTVKVNQLLLF*EHILSVDV 325
           GPQLPKKI ALASYR+Y FAAYG+DIAV+K+AHQVA WS H  KVN LLLF +HILSVD+
Sbjct: 52  GPQLPKKIRALASYREYTFAAYGSDIAVFKRAHQVANWSSHKAKVNLLLLFGDHILSVDI 111

Query: 326 EGNIFTWAF*RIDQNLAQIGHILLED*FTPSCIMHPDTYLNKVLLGSQEGALQLWNNSTK 505
            GN+F W F  I+ + + +G ++L   F+PSCIMHPDTYLNKV+LGS EG+L+LWN S+K
Sbjct: 112 NGNMFMWPFKGIEDSQSPVGQVILGRKFSPSCIMHPDTYLNKVILGSLEGSLELWNISSK 171

Query: 506 KMLFEFKGWKSSICCCVSSPALDVLTVGCSDGKIH 610
           K LFEFKGW SS+CCCVSSPALDV+ +GC+DGK+H
Sbjct: 172 KKLFEFKGWNSSVCCCVSSPALDVVAIGCADGKVH 206



 Score = 69.7 bits (169), Expect = 4e-10
 Identities = 37/78 (47%), Positives = 42/78 (53%), Gaps = 23/78 (29%)
 Frame = +3

Query: 3   ACTISTCGNFAVLGTASGWIKR-----------------------LGEAVGITCDSTNTL 113
           AC IS CGNFA LGT  GWI+R                       +GE VG+ CDSTNT 
Sbjct: 429 ACAISACGNFAFLGTEGGWIERFNLQSGASRGSYLDKMEGGSCAHVGEVVGLACDSTNTH 488

Query: 114 MISAGYHGDIKALNCQRR 167
           +ISAG HGDIK  N + R
Sbjct: 489 VISAGVHGDIKVWNFKER 506


>ref|XP_003516969.1| PREDICTED: uncharacterized WD repeat-containing protein
           C1672.07-like [Glycine max]
          Length = 906

 Score =  234 bits (598), Expect = 7e-60
 Identities = 107/155 (69%), Positives = 128/155 (82%)
 Frame = +2

Query: 146 GPQLPKKIWALASYRDYRFAAYGNDIAVYKQAHQVATWSRHTVKVNQLLLF*EHILSVDV 325
           GPQLPKKI ALASYR+Y FAAYGN+IAV+K+AHQ ATWS H  KV  LLLF +HI+SVD 
Sbjct: 52  GPQLPKKISALASYREYTFAAYGNNIAVFKRAHQFATWSSHNAKVKLLLLFGDHIVSVDA 111

Query: 326 EGNIFTWAF*RIDQNLAQIGHILLED*FTPSCIMHPDTYLNKVLLGSQEGALQLWNNSTK 505
            GN+F W F  ID+N    GHI+L++ F+PSCIMHPDTYLNKVL+GS++G +QLWN STK
Sbjct: 112 RGNMFLWPFKGIDENHVPFGHIMLDEKFSPSCIMHPDTYLNKVLIGSEQGPMQLWNISTK 171

Query: 506 KMLFEFKGWKSSICCCVSSPALDVLTVGCSDGKIH 610
           K +FEFKGW S I CCVSSPALDV+ +GC+DG+IH
Sbjct: 172 KKIFEFKGWNSPISCCVSSPALDVVAIGCTDGRIH 206



 Score = 72.4 bits (176), Expect = 6e-11
 Identities = 38/78 (48%), Positives = 42/78 (53%), Gaps = 23/78 (29%)
 Frame = +3

Query: 3   ACTISTCGNFAVLGTASGWIKRL-----------------------GEAVGITCDSTNTL 113
           AC IS CGNF  LGTA GWI+R                        GE VG+ CDSTNTL
Sbjct: 429 ACAISACGNFVFLGTAGGWIERFNLQSGICRGAYIDISESRSCAHDGEVVGVACDSTNTL 488

Query: 114 MISAGYHGDIKALNCQRR 167
           MISAGY GDIK  + + R
Sbjct: 489 MISAGYEGDIKVWDFKER 506


Top