BLASTX nr result
ID: Panax21_contig00005199
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00005199
(1146 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation... 460 e-127
ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus c... 453 e-125
ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation... 450 e-124
ref|XP_002323907.1| predicted protein [Populus trichocarpa] gi|2... 449 e-124
ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic t... 443 e-122
>ref|XP_002280247.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M
[Vitis vinifera] gi|296082198|emb|CBI21203.3| unnamed
protein product [Vitis vinifera]
Length = 410
Score = 460 bits (1183), Expect = e-127
Identities = 230/322 (71%), Positives = 268/322 (83%), Gaps = 1/322 (0%)
Frame = -1
Query: 1143 QVSRLCLEAQECMITGRWLDLASLMLTSADLIFSKASEKDLECVFTVICNLVKKSDSLXX 964
QV+RLC+EAQECM+ GRWLDLASLMLTSADL+FSKAS+KDLEC+FTVICNLV KS+S
Sbjct: 36 QVTRLCMEAQECMVRGRWLDLASLMLTSADLMFSKASDKDLECIFTVICNLVTKSESPDE 95
Query: 963 XXXXXXXXXXXXXXXXXXXXXX-LKIMFNLYNLLENPYSRFFVYMKALDLAVHGKVIELI 787
LKI+FNLYNLLENPYSRF+VYMKAL+LAV+GKV E I
Sbjct: 96 ALEMAKFISAKITQQPNDKAALRLKILFNLYNLLENPYSRFYVYMKALNLAVNGKVTEHI 155
Query: 786 IPSFKKLDDFLKEWNLGVQDQRQLFLSASNILKECKSSAKDSFKFLTKYLATFSGEDAHS 607
IPSFK +D FLKEWN+G+ DQR L+L+ SNILKE KS KD FKFLTKYLATFSGEDA++
Sbjct: 156 IPSFKMMDSFLKEWNIGILDQRALYLNISNILKENKSLGKDYFKFLTKYLATFSGEDAYT 215
Query: 606 MGEAEEAAVRSIIEFVKTPDMFQCDLLNMPAVAQLEKDAKYELAYQLLKIFLTQKLDAYL 427
M EA+E AVR+I+EFV+ PDMFQCDLL+MPAV QLEKDAKY L YQLLKIFLTQ+LDAYL
Sbjct: 216 MSEAKEEAVRTIMEFVRAPDMFQCDLLDMPAVGQLEKDAKYALVYQLLKIFLTQRLDAYL 275
Query: 426 EFHSANSSWLKSYGLVHEECIAKMRLMSLVDLGANESGHIPYDLIMDTLQISEDEVELWA 247
+FH+ANS+ LKSYGLVHE+CI KMRLMSLVDLG++ES IPY LI DTL+I +DEVELW
Sbjct: 276 DFHAANSTLLKSYGLVHEDCITKMRLMSLVDLGSDESCQIPYSLIKDTLRIDDDEVELWV 335
Query: 246 VKAVTAKLIDCKLDQMNQIIIV 181
VKA+T KL+DCK+DQMNQ+++V
Sbjct: 336 VKAITVKLMDCKMDQMNQVVLV 357
>ref|XP_002533539.1| cop9 complex subunit 7a, putative [Ricinus communis]
gi|223526589|gb|EEF28842.1| cop9 complex subunit 7a,
putative [Ricinus communis]
Length = 412
Score = 453 bits (1166), Expect = e-125
Identities = 229/324 (70%), Positives = 270/324 (83%), Gaps = 3/324 (0%)
Frame = -1
Query: 1143 QVSRLCLEAQECMITGRWLDLASLMLTSADLIFS--KASEKDLECVFTVICNLVKKSDSL 970
QVSRLC+EAQECM+ GRWLDLASL+LTSAD+IFS K SEKDLEC+FTVICNLV K DS
Sbjct: 36 QVSRLCVEAQECMVIGRWLDLASLILTSADVIFSNSKVSEKDLECIFTVICNLVTKPDSP 95
Query: 969 XXXXXXXXXXXXXXXXXXXXXXXX-LKIMFNLYNLLENPYSRFFVYMKALDLAVHGKVIE 793
LKI+FNLYNLLE+PYSRF+VY+KALDLA++GKV E
Sbjct: 96 DEALEMAKLICGKIIQQPADKPALRLKILFNLYNLLESPYSRFYVYLKALDLALNGKVTE 155
Query: 792 LIIPSFKKLDDFLKEWNLGVQDQRQLFLSASNILKECKSSAKDSFKFLTKYLATFSGEDA 613
++PSFK ++ FLKEWNL V+DQR+LFLS SN+L+E KSS KDSFKFLTKYLATF+GEDA
Sbjct: 156 HMVPSFKTIESFLKEWNLEVKDQRELFLSISNVLRESKSSGKDSFKFLTKYLATFAGEDA 215
Query: 612 HSMGEAEEAAVRSIIEFVKTPDMFQCDLLNMPAVAQLEKDAKYELAYQLLKIFLTQKLDA 433
++MGEA+E AVR+IIEFVK+PDMFQCDLL+MPAV QLEKD KY L YQLLKIFLTQ+LDA
Sbjct: 216 YAMGEAKEEAVRTIIEFVKSPDMFQCDLLDMPAVGQLEKDGKYALVYQLLKIFLTQRLDA 275
Query: 432 YLEFHSANSSWLKSYGLVHEECIAKMRLMSLVDLGANESGHIPYDLIMDTLQISEDEVEL 253
YLEF +ANS+ LKSY LVHE+CIAKMRLMSL+DL +ESG IPY LI DTL+I++DEVEL
Sbjct: 276 YLEFQTANSALLKSYDLVHEDCIAKMRLMSLLDLSLDESGRIPYTLIKDTLRINDDEVEL 335
Query: 252 WAVKAVTAKLIDCKLDQMNQIIIV 181
W VKA+TAKLI+CK+DQMN+++IV
Sbjct: 336 WVVKAITAKLINCKMDQMNEVVIV 359
>ref|XP_004156166.1| PREDICTED: eukaryotic translation initiation factor 3 subunit M-like
[Cucumis sativus]
Length = 410
Score = 450 bits (1157), Expect = e-124
Identities = 225/322 (69%), Positives = 263/322 (81%), Gaps = 1/322 (0%)
Frame = -1
Query: 1143 QVSRLCLEAQECMITGRWLDLASLMLTSADLIFSKASEKDLECVFTVICNLVKKSDSLXX 964
QV+RLC+EAQECM+ GRWLDLASLMLTSADLIFSK SEKDLECVFT+ICNLV K+ S
Sbjct: 36 QVNRLCVEAQECMVIGRWLDLASLMLTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDE 95
Query: 963 XXXXXXXXXXXXXXXXXXXXXX-LKIMFNLYNLLENPYSRFFVYMKALDLAVHGKVIELI 787
LKI+FNLYNLLENPYSRF VYMKALDLA GK E I
Sbjct: 96 SLEMAKLISAKICQQPNDKPALRLKILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHI 155
Query: 786 IPSFKKLDDFLKEWNLGVQDQRQLFLSASNILKECKSSAKDSFKFLTKYLATFSGEDAHS 607
IP+ KK++ FL+EWN+G+ +QR+LFL+ SN+LKE KSSA D FKFLTKYLATFSGEDA +
Sbjct: 156 IPTLKKIESFLREWNIGIVEQRELFLAISNVLKESKSSANDYFKFLTKYLATFSGEDAST 215
Query: 606 MGEAEEAAVRSIIEFVKTPDMFQCDLLNMPAVAQLEKDAKYELAYQLLKIFLTQKLDAYL 427
+ EA+E AV +I+EFVK P+MF+CDLL+MPAV QLEKDAKY L YQLLKIFLTQ+LDAY+
Sbjct: 216 LSEAKEEAVHAIVEFVKAPNMFKCDLLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYM 275
Query: 426 EFHSANSSWLKSYGLVHEECIAKMRLMSLVDLGANESGHIPYDLIMDTLQISEDEVELWA 247
EF + NSS LKSYGLVHE+CIAKMRL+SLVDLG+NES IPY LI DTLQI++DEVELW
Sbjct: 276 EFQATNSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKDTLQINDDEVELWV 335
Query: 246 VKAVTAKLIDCKLDQMNQIIIV 181
VKA+T+KLIDCK+DQMN+++IV
Sbjct: 336 VKAITSKLIDCKMDQMNEVVIV 357
>ref|XP_002323907.1| predicted protein [Populus trichocarpa] gi|222866909|gb|EEF04040.1|
predicted protein [Populus trichocarpa]
Length = 439
Score = 449 bits (1156), Expect = e-124
Identities = 231/328 (70%), Positives = 262/328 (79%), Gaps = 3/328 (0%)
Frame = -1
Query: 1143 QVSRLCLEAQECMITGRWLDLASLMLTSADLIFS--KASEKDLECVFTVICNLVKKSDSL 970
QVSRLC+EAQECM+ RWLDL SLMLTSAD++FS K SEKDLEC+FTVICNLV KS S
Sbjct: 36 QVSRLCVEAQECMVMNRWLDLTSLMLTSADIVFSNSKVSEKDLECIFTVICNLVTKSRSP 95
Query: 969 XXXXXXXXXXXXXXXXXXXXXXXX-LKIMFNLYNLLENPYSRFFVYMKALDLAVHGKVIE 793
LKI+FNLYNLL+N Y RF+V+MKAL LAV GKV E
Sbjct: 96 DEELEMAKLICAKIIQQPSDKPALRLKILFNLYNLLDNAYCRFYVFMKALTLAVSGKVTE 155
Query: 792 LIIPSFKKLDDFLKEWNLGVQDQRQLFLSASNILKECKSSAKDSFKFLTKYLATFSGEDA 613
+IPSFKK+D FLKEWNL VQDQR+LFLS +N LK+ KSSAKDSFKFLTKYLATFS ED
Sbjct: 156 HVIPSFKKIDSFLKEWNLEVQDQRELFLSVANALKDSKSSAKDSFKFLTKYLATFSDEDT 215
Query: 612 HSMGEAEEAAVRSIIEFVKTPDMFQCDLLNMPAVAQLEKDAKYELAYQLLKIFLTQKLDA 433
+ MGEA+E A R+IIEFVK PDMFQCDLL+MPAV QLEKDAKY L YQLLKIFLTQ+LDA
Sbjct: 216 YKMGEAKEEAARTIIEFVKAPDMFQCDLLDMPAVGQLEKDAKYALVYQLLKIFLTQRLDA 275
Query: 432 YLEFHSANSSWLKSYGLVHEECIAKMRLMSLVDLGANESGHIPYDLIMDTLQISEDEVEL 253
YLEF +ANS+ LKSYGLVHE+CIAKMRLMSLVDL ++ESG IPY LI DTL+I DEVEL
Sbjct: 276 YLEFQAANSALLKSYGLVHEDCIAKMRLMSLVDLASHESGRIPYALIKDTLRIDNDEVEL 335
Query: 252 WAVKAVTAKLIDCKLDQMNQIIIVREVF 169
W VKA+T KLIDCK+DQ+NQ+++VR F
Sbjct: 336 WVVKALTTKLIDCKMDQLNQVVLVRYSF 363
>ref|XP_004141468.1| PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation
factor 3 subunit M-like [Cucumis sativus]
Length = 417
Score = 443 bits (1139), Expect = e-122
Identities = 225/329 (68%), Positives = 263/329 (79%), Gaps = 8/329 (2%)
Frame = -1
Query: 1143 QVSRLCLEAQECMITGRWLDLASLMLTSADLIFSKASEKDLECVFTVICNLVKKSDSLXX 964
QV+RLC+EAQECM+ GRWLDLASLMLTSADLIFSK SEKDLECVFT+ICNLV K+ S
Sbjct: 36 QVNRLCVEAQECMVIGRWLDLASLMLTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDE 95
Query: 963 XXXXXXXXXXXXXXXXXXXXXX-LKIMFNLYNLLENPYSRFFVYMKALDLAVHGKVIELI 787
LKI+FNLYNLLENPYSRF VYMKALDLA GK E I
Sbjct: 96 SLEMAKLISAKICQQPNDKPALRLKILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHI 155
Query: 786 IPSFKKLDDFLKEWNLGVQDQRQLFLSASNILKECKSSAKDSFKFLTKYLATFSGEDAHS 607
IP+ KK++ FL+EWN+G+ +QR+LFL+ SN+LKE KSSA D FKFLTKYLATFSGEDA +
Sbjct: 156 IPTLKKIESFLREWNIGIVEQRELFLAISNVLKESKSSANDYFKFLTKYLATFSGEDAST 215
Query: 606 MGEAEEAAVRSIIEFVKTPDMFQCDLLNMPAVAQLEKDAKYELAYQLLKIFLTQKLDAYL 427
+ EA+E AV +I+EFVK P+MF+CDLL+MPAV QLEKDAKY L YQLLKIFLTQ+LDAY+
Sbjct: 216 LSEAKEEAVHAIVEFVKAPNMFKCDLLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYM 275
Query: 426 EFHSANSSWLKSYGLVHEECIAKMRLMSLVDLGANESGHIPYDLIMDTL-------QISE 268
EF + NSS LKSYGLVHE+CIAKMRL+SLVDLG+NES IPY LI DTL QI++
Sbjct: 276 EFQATNSSLLKSYGLVHEDCIAKMRLLSLVDLGSNESARIPYALIKDTLRXKKKLSQIND 335
Query: 267 DEVELWAVKAVTAKLIDCKLDQMNQIIIV 181
DEVELW VKA+T+KLIDCK+DQMN+++IV
Sbjct: 336 DEVELWVVKAITSKLIDCKMDQMNEVVIV 364