BLASTX nr result

ID: Panax21_contig00005194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005194
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278685.1| PREDICTED: MORC family CW-type zinc finger p...   135   2e-46
ref|XP_002511370.1| zinc finger protein, putative [Ricinus commu...   132   5e-45
ref|XP_002321614.1| predicted protein [Populus trichocarpa] gi|2...   131   3e-44
ref|XP_002318684.1| predicted protein [Populus trichocarpa] gi|2...   125   2e-42
emb|CBI34886.3| unnamed protein product [Vitis vinifera]              119   9e-41

>ref|XP_002278685.1| PREDICTED: MORC family CW-type zinc finger protein 3 [Vitis
           vinifera] gi|297733753|emb|CBI15000.3| unnamed protein
           product [Vitis vinifera]
          Length = 709

 Score =  135 bits (340), Expect(2) = 2e-46
 Identities = 63/84 (75%), Positives = 72/84 (85%)
 Frame = +3

Query: 174 DQHIANRLRYSLRAYLSVLYLRIPESFCILLRGEVVEYHNIATDLKFPEFIKYSPHNGGC 353
           +QHIANR   SLR YLS+LYLRIP++F I+LRG+VVE+HNIA DLKFPEFI Y P  GG 
Sbjct: 367 EQHIANRFHISLRVYLSILYLRIPQNFNIILRGKVVEHHNIANDLKFPEFILYRPQTGGL 426

Query: 354 VEGTIITTIGFLKEAPLVNIHGFN 425
           VEGT++TTIGFLKEAP VNIHGFN
Sbjct: 427 VEGTVVTTIGFLKEAPQVNIHGFN 450



 Score = 75.9 bits (185), Expect(2) = 2e-46
 Identities = 30/40 (75%), Positives = 38/40 (95%)
 Frame = +1

Query: 1   ELMKQFDDIGYHGTKIIIYNLWFNDENTMELDFESDPKDI 120
           EL+KQFDDIGYHGTK++IYNLWF+D+  +ELDF+SDP+DI
Sbjct: 308 ELLKQFDDIGYHGTKVVIYNLWFSDDGNVELDFDSDPEDI 347


>ref|XP_002511370.1| zinc finger protein, putative [Ricinus communis]
           gi|223550485|gb|EEF51972.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 717

 Score =  132 bits (333), Expect(2) = 5e-45
 Identities = 61/84 (72%), Positives = 72/84 (85%)
 Frame = +3

Query: 174 DQHIANRLRYSLRAYLSVLYLRIPESFCILLRGEVVEYHNIATDLKFPEFIKYSPHNGGC 353
           ++HIANRL YSLR YLS+LYLR+PE+F I+LRG VVE+HN+A DLKF EFI Y P +GG 
Sbjct: 348 EEHIANRLHYSLRVYLSILYLRMPETFRIILRGRVVEHHNLANDLKFQEFILYKPQSGGV 407

Query: 354 VEGTIITTIGFLKEAPLVNIHGFN 425
           VEG +ITTIGFLKEAP VN+HGFN
Sbjct: 408 VEGQVITTIGFLKEAPHVNVHGFN 431



 Score = 73.6 bits (179), Expect(2) = 5e-45
 Identities = 30/40 (75%), Positives = 37/40 (92%)
 Frame = +1

Query: 1   ELMKQFDDIGYHGTKIIIYNLWFNDENTMELDFESDPKDI 120
           EL+KQFDDIG HGTK+IIYNLWFND+  +ELDF++DP+DI
Sbjct: 289 ELLKQFDDIGSHGTKVIIYNLWFNDDGVVELDFDTDPQDI 328


>ref|XP_002321614.1| predicted protein [Populus trichocarpa] gi|222868610|gb|EEF05741.1|
           predicted protein [Populus trichocarpa]
          Length = 653

 Score =  131 bits (329), Expect(2) = 3e-44
 Identities = 60/102 (58%), Positives = 78/102 (76%)
 Frame = +3

Query: 120 IAGEANIIEKRGLRMAATDQHIANRLRYSLRAYLSVLYLRIPESFCILLRGEVVEYHNIA 299
           I G+   ++ R       ++HI+NRLRYSLRAYLS+LYLRIPE+F I+LRG  V++HN+A
Sbjct: 328 INGDIKEVQTRPAWRTVNEEHISNRLRYSLRAYLSILYLRIPENFTIVLRGGFVKHHNLA 387

Query: 300 TDLKFPEFIKYSPHNGGCVEGTIITTIGFLKEAPLVNIHGFN 425
            DLKF EFI Y P + GC++G ++TTIGFLKEAP V +HGFN
Sbjct: 388 LDLKFQEFIVYRPQSSGCIKGELLTTIGFLKEAPQVTVHGFN 429



 Score = 72.4 bits (176), Expect(2) = 3e-44
 Identities = 29/46 (63%), Positives = 39/46 (84%)
 Frame = +1

Query: 1   ELMKQFDDIGYHGTKIIIYNLWFNDENTMELDFESDPKDILLERPI 138
           EL+KQF+DIG HGTK+I+YNLWFND+  +ELDF++DP+DI +   I
Sbjct: 287 ELLKQFEDIGLHGTKVIVYNLWFNDDGNVELDFDTDPEDIRINGDI 332


>ref|XP_002318684.1| predicted protein [Populus trichocarpa] gi|222859357|gb|EEE96904.1|
           predicted protein [Populus trichocarpa]
          Length = 518

 Score =  125 bits (315), Expect(2) = 2e-42
 Identities = 59/102 (57%), Positives = 72/102 (70%)
 Frame = +3

Query: 120 IAGEANIIEKRGLRMAATDQHIANRLRYSLRAYLSVLYLRIPESFCILLRGEVVEYHNIA 299
           I G+   ++         +QHIANRL YSLRAYLS+LYL+IPE+F I+LRG+ VE+ N+ 
Sbjct: 338 IGGDVKKVQANPAWRTVNEQHIANRLHYSLRAYLSILYLKIPETFTIVLRGQFVEHRNLV 397

Query: 300 TDLKFPEFIKYSPHNGGCVEGTIITTIGFLKEAPLVNIHGFN 425
            DLKF EFI Y P  GGC E  ++TTIGFLKEAP V  HGFN
Sbjct: 398 LDLKFQEFIVYRPQTGGCKEAEVLTTIGFLKEAPHVTAHGFN 439



 Score = 71.6 bits (174), Expect(2) = 2e-42
 Identities = 29/40 (72%), Positives = 37/40 (92%)
 Frame = +1

Query: 1   ELMKQFDDIGYHGTKIIIYNLWFNDENTMELDFESDPKDI 120
           EL+KQFDDIG HGTK+IIYNLWF+D+  +ELDF++DP+DI
Sbjct: 297 ELLKQFDDIGSHGTKVIIYNLWFSDDGNVELDFDTDPEDI 336


>emb|CBI34886.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  119 bits (297), Expect(2) = 9e-41
 Identities = 58/84 (69%), Positives = 66/84 (78%)
 Frame = +3

Query: 174 DQHIANRLRYSLRAYLSVLYLRIPESFCILLRGEVVEYHNIATDLKFPEFIKYSPHNGGC 353
           DQH+AN   YSLR Y S+LYLRIP+ F I+LRG VVE+HNIA DLKF E I Y PH GG 
Sbjct: 290 DQHMANLYHYSLRIYSSILYLRIPQCFRIILRGRVVEHHNIANDLKFWEIILYRPHIGGN 349

Query: 354 VEGTIITTIGFLKEAPLVNIHGFN 425
           VE  ++TTIGFLK+AP VNIHGFN
Sbjct: 350 VEVPVLTTIGFLKDAPHVNIHGFN 373



 Score = 73.2 bits (178), Expect(2) = 9e-41
 Identities = 34/51 (66%), Positives = 41/51 (80%), Gaps = 1/51 (1%)
 Frame = +1

Query: 4   LMKQFDDIGYHGTKIIIYNLWFNDENTMELDFESDPKDILLER-PILLKKG 153
           L++QFDDIG HGTKI+IYNLW NDE  MELDF+SD +DI + R P L +KG
Sbjct: 232 LLQQFDDIGQHGTKIVIYNLWLNDEGHMELDFDSDVEDICINRGPKLFQKG 282


Top