BLASTX nr result
ID: Panax21_contig00005191
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00005191
(1651 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding prote... 350 e-144
emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum] 365 e-144
ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding prote... 338 e-141
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici... 343 e-139
ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|2... 333 e-139
>ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
2 [Vitis vinifera]
Length = 418
Score = 350 bits (897), Expect(3) = e-144
Identities = 168/196 (85%), Positives = 181/196 (92%)
Frame = +2
Query: 494 ENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFLEGYGFVEFFSHAAAEKV 673
+NRTIWVGDLHNWMDE+YL SCFA+TGE+AS+KVIRNKQTG EGYGFVEFFSHAAAEKV
Sbjct: 82 DNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKV 141
Query: 674 LQSYTCIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFATKY 853
LQ Y + MPNT+QPFRLNWATFSMGDKRS+NG DLSIFVGDLA+DV+D+LLHETFA KY
Sbjct: 142 LQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKY 201
Query: 854 PSVKAAKVVLDVNTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRAMRIGAATPRKSAG 1033
PSVKAAKVV D NTGRSKGYGFVRFGD+NERSQAMTEMNGVYCSSR MRIGAATPRKS+G
Sbjct: 202 PSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSG 261
Query: 1034 YQQQYSSPGRYVSNGA 1081
YQQQYSS G Y SNGA
Sbjct: 262 YQQQYSSHGGYASNGA 277
Score = 118 bits (295), Expect(3) = e-144
Identities = 50/62 (80%), Positives = 56/62 (90%)
Frame = +2
Query: 1391 HRNNAEEALQKLNGTAIGKNTVRLSWGRNPANKQFRGDYGNQWTGAYYGAHIYDGYGYAM 1570
+RNNAE+ALQKLNGT IGK TVRLSWGRNPANKQ R D+GNQW+GAYYG +YDGYGYA+
Sbjct: 332 NRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYAL 391
Query: 1571 PP 1576
PP
Sbjct: 392 PP 393
Score = 94.4 bits (233), Expect(3) = e-144
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +3
Query: 1164 TTIFVGGLDPNVNDEDLRQPFSQYGEIVSVKIPVAKGCGFVQFANR 1301
TTIFVGGLDPNV+DEDLRQPFSQYGEIVSVKIPV KGCGFVQFANR
Sbjct: 288 TTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANR 333
Score = 60.1 bits (144), Expect = 2e-06
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 24/211 (11%)
Frame = +2
Query: 491 GENRTIWVGDLHNWMDEDYLRSCFAST-GEVASIKVIRNKQTGFLEGYGFVEFFSHAAAE 667
G + +I+VGDL + + + L FA V + KV+ + TG +GYGFV F
Sbjct: 174 GPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERS 233
Query: 668 KVLQSYTCIAMPNTEQPFRLNWAT-----------FSMGDKRSNNGS--------DLSIF 790
+ + + + +P R+ AT S G SN S + +IF
Sbjct: 234 QAMTEMNGVYC--SSRPMRIGAATPRKSSGYQQQYSSHGGYASNGASVQSDGDSMNTTIF 291
Query: 791 VGDLAADVTDTLLHETFATKYPSVKAAKVVLDVNTGRSKGYGFVRFGDDNERSQAMTEMN 970
VG L +V+D L + F+ +Y + + K+ + KG GFV+F + N A+ ++N
Sbjct: 292 VGGLDPNVSDEDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLN 344
Query: 971 GVYCSSRAMRI----GAATPRKSAGYQQQYS 1051
G + +R+ A + A + Q+S
Sbjct: 345 GTVIGKQTVRLSWGRNPANKQMRADFGNQWS 375
>emb|CAC69852.1| nucleic acid binding protein [Nicotiana tabacum]
Length = 456
Score = 365 bits (937), Expect(3) = e-144
Identities = 178/198 (89%), Positives = 186/198 (93%)
Frame = +2
Query: 494 ENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFLEGYGFVEFFSHAAAEKV 673
ENRTIWVGDL NWMDEDYLR+CFAST EVASIKVIRNKQTGF EGYGFVEFF+HAAAEKV
Sbjct: 115 ENRTIWVGDLLNWMDEDYLRNCFASTNEVASIKVIRNKQTGFSEGYGFVEFFTHAAAEKV 174
Query: 674 LQSYTCIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFATKY 853
LQ+Y+C+ MPN +QPFRLNWATFSMGDKR+NNGSDLSIFVGDLAADVTDTLLHETFATKY
Sbjct: 175 LQTYSCMTMPNVDQPFRLNWATFSMGDKRANNGSDLSIFVGDLAADVTDTLLHETFATKY 234
Query: 854 PSVKAAKVVLDVNTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRAMRIGAATPRKSAG 1033
PSVKAAKVV D NTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSR MRIGAATPRKS+G
Sbjct: 235 PSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKSSG 294
Query: 1034 YQQQYSSPGRYVSNGAPA 1087
YQQQYSS G Y SNG PA
Sbjct: 295 YQQQYSSQGGY-SNGGPA 311
Score = 121 bits (304), Expect(3) = e-144
Identities = 58/88 (65%), Positives = 61/88 (69%), Gaps = 1/88 (1%)
Frame = +2
Query: 1391 HRNNAEEALQKLNGTAIGKNTVRLSWGRNPANKQFRGDYGNQWTGAYYGAHIYDGYGYAM 1570
+RN+AEEALQKLNGT IGK TVRL WGRNPANKQ RGD+GNQWTG YYG H YDGYGYA
Sbjct: 367 NRNDAEEALQKLNGTFIGKQTVRLFWGRNPANKQSRGDFGNQWTGPYYGGHFYDGYGYAF 426
Query: 1571 PP-HXXXXXXXXXXXXXXXXXYDTHQQQ 1651
PP H Y THQQQ
Sbjct: 427 PPQHDPGMYAAAAAAYGAYPIYGTHQQQ 454
Score = 74.7 bits (182), Expect(3) = e-144
Identities = 37/46 (80%), Positives = 39/46 (84%)
Frame = +3
Query: 1164 TTIFVGGLDPNVNDEDLRQPFSQYGEIVSVKIPVAKGCGFVQFANR 1301
TTIFVGGLDPNV+DEDLRQPF QYGEIVSVKIPV + QFANR
Sbjct: 323 TTIFVGGLDPNVSDEDLRQPFVQYGEIVSVKIPVEERVWVWQFANR 368
>ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like isoform
1 [Vitis vinifera]
Length = 409
Score = 338 bits (868), Expect(3) = e-141
Identities = 162/187 (86%), Positives = 175/187 (93%)
Frame = +2
Query: 494 ENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFLEGYGFVEFFSHAAAEKV 673
+NRTIWVGDLHNWMDE+YL SCFA+TGE+AS+KVIRNKQTG EGYGFVEFFSHAAAEKV
Sbjct: 82 DNRTIWVGDLHNWMDENYLHSCFAATGELASMKVIRNKQTGSSEGYGFVEFFSHAAAEKV 141
Query: 674 LQSYTCIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFATKY 853
LQ Y + MPNT+QPFRLNWATFSMGDKRS+NG DLSIFVGDLA+DV+D+LLHETFA KY
Sbjct: 142 LQGYAGVLMPNTDQPFRLNWATFSMGDKRSDNGPDLSIFVGDLASDVSDSLLHETFAGKY 201
Query: 854 PSVKAAKVVLDVNTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRAMRIGAATPRKSAG 1033
PSVKAAKVV D NTGRSKGYGFVRFGD+NERSQAMTEMNGVYCSSR MRIGAATPRKS+G
Sbjct: 202 PSVKAAKVVFDANTGRSKGYGFVRFGDENERSQAMTEMNGVYCSSRPMRIGAATPRKSSG 261
Query: 1034 YQQQYSS 1054
YQQQYSS
Sbjct: 262 YQQQYSS 268
Score = 118 bits (295), Expect(3) = e-141
Identities = 50/62 (80%), Positives = 56/62 (90%)
Frame = +2
Query: 1391 HRNNAEEALQKLNGTAIGKNTVRLSWGRNPANKQFRGDYGNQWTGAYYGAHIYDGYGYAM 1570
+RNNAE+ALQKLNGT IGK TVRLSWGRNPANKQ R D+GNQW+GAYYG +YDGYGYA+
Sbjct: 323 NRNNAEDALQKLNGTVIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYAL 382
Query: 1571 PP 1576
PP
Sbjct: 383 PP 384
Score = 94.4 bits (233), Expect(3) = e-141
Identities = 44/46 (95%), Positives = 45/46 (97%)
Frame = +3
Query: 1164 TTIFVGGLDPNVNDEDLRQPFSQYGEIVSVKIPVAKGCGFVQFANR 1301
TTIFVGGLDPNV+DEDLRQPFSQYGEIVSVKIPV KGCGFVQFANR
Sbjct: 279 TTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANR 324
Score = 62.0 bits (149), Expect = 4e-07
Identities = 51/202 (25%), Positives = 92/202 (45%), Gaps = 15/202 (7%)
Frame = +2
Query: 491 GENRTIWVGDLHNWMDEDYLRSCFAST-GEVASIKVIRNKQTGFLEGYGFVEFFSHAAAE 667
G + +I+VGDL + + + L FA V + KV+ + TG +GYGFV F
Sbjct: 174 GPDLSIFVGDLASDVSDSLLHETFAGKYPSVKAAKVVFDANTGRSKGYGFVRFGDENERS 233
Query: 668 KVLQSYTCIAMPNTEQPFRLNWAT----------FSMGDKRSNNGSDLSIFVGDLAADVT 817
+ + + + +P R+ AT +S + + + +IFVG L +V+
Sbjct: 234 QAMTEMNGVYC--SSRPMRIGAATPRKSSGYQQQYSSHVQSDGDSMNTTIFVGGLDPNVS 291
Query: 818 DTLLHETFATKYPSVKAAKVVLDVNTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRAM 997
D L + F+ +Y + + K+ + KG GFV+F + N A+ ++NG + +
Sbjct: 292 DEDLRQPFS-QYGEIVSVKIPV------GKGCGFVQFANRNNAEDALQKLNGTVIGKQTV 344
Query: 998 RI----GAATPRKSAGYQQQYS 1051
R+ A + A + Q+S
Sbjct: 345 RLSWGRNPANKQMRADFGNQWS 366
>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein,
putative [Ricinus communis]
Length = 443
Score = 343 bits (879), Expect(3) = e-139
Identities = 165/202 (81%), Positives = 179/202 (88%)
Frame = +2
Query: 476 GSCGGGENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFLEGYGFVEFFSH 655
G GGGENRT+W+GDLH+WMDE+YL +CFASTGE+ SIKVIRNKQTG EGYGFVEF++H
Sbjct: 101 GGGGGGENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTH 160
Query: 656 AAAEKVLQSYTCIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHE 835
A AEKVLQ+Y I MPNTEQPFRLNWATFS GDKRS+N DLSIFVGDLAADVTD+LLHE
Sbjct: 161 ATAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHE 220
Query: 836 TFATKYPSVKAAKVVLDVNTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRAMRIGAAT 1015
TF ++YPSVKAAKVV D NTGRSKGYGFVRFGDDNER+QAMTEMNGVYCSSRAMRIGAAT
Sbjct: 221 TFVSRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAAT 280
Query: 1016 PRKSAGYQQQYSSPGRYVSNGA 1081
PRKS GYQ Q G YVSNGA
Sbjct: 281 PRKSTGYQHQ----GGYVSNGA 298
Score = 112 bits (279), Expect(3) = e-139
Identities = 56/87 (64%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Frame = +2
Query: 1394 RNNAEEALQKLNGTAIGKNTVRLSWGRNPANK-QFRGDYGNQWTGAYYGAHIYDGYGYAM 1570
R+NAEEALQKLNGT IGK TVRLSWGRNPANK Q R D+GNQW GAYYG IYDGYGYA+
Sbjct: 357 RSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQLRSDFGNQWGGAYYGGQIYDGYGYAL 416
Query: 1571 PPHXXXXXXXXXXXXXXXXXYDTHQQQ 1651
PP Y +HQQQ
Sbjct: 417 PP--PHDPSMYAAPYGAYPVYGSHQQQ 441
Score = 90.9 bits (224), Expect(3) = e-139
Identities = 42/46 (91%), Positives = 44/46 (95%)
Frame = +3
Query: 1164 TTIFVGGLDPNVNDEDLRQPFSQYGEIVSVKIPVAKGCGFVQFANR 1301
TTIFVGGLDPNV DEDL+QPFSQYGEIVSVKIPV KGCGFVQFA+R
Sbjct: 312 TTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCGFVQFASR 357
>ref|XP_002327112.1| predicted protein [Populus trichocarpa] gi|222835427|gb|EEE73862.1|
predicted protein [Populus trichocarpa]
Length = 429
Score = 333 bits (853), Expect(3) = e-139
Identities = 163/201 (81%), Positives = 176/201 (87%)
Frame = +2
Query: 485 GGGENRTIWVGDLHNWMDEDYLRSCFASTGEVASIKVIRNKQTGFLEGYGFVEFFSHAAA 664
G GEN+TIW+GDLH+WMDE+YL SCF STGE+ASIKVIRNKQTG EGYGFVEF +HA A
Sbjct: 88 GSGENKTIWIGDLHHWMDENYLHSCFVSTGEIASIKVIRNKQTGLSEGYGFVEFLTHATA 147
Query: 665 EKVLQSYTCIAMPNTEQPFRLNWATFSMGDKRSNNGSDLSIFVGDLAADVTDTLLHETFA 844
EKVLQ+Y I MPNTEQPFRLNWATFS GDKRS+N DLSIFVGDLAADVTD+LL ETF
Sbjct: 148 EKVLQNYGGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLQETFV 207
Query: 845 TKYPSVKAAKVVLDVNTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRAMRIGAATPRK 1024
+KYPSVKAAKVV D NTGRSKGYGFVRFGDD+ER+QAMTEMNGVYCSSR MRIGAATPRK
Sbjct: 208 SKYPSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMTEMNGVYCSSRPMRIGAATPRK 267
Query: 1025 SAGYQQQYSSPGRYVSNGAPA 1087
S+GYQQQ G Y SNGA A
Sbjct: 268 SSGYQQQ----GGYGSNGASA 284
Score = 118 bits (296), Expect(3) = e-139
Identities = 55/88 (62%), Positives = 62/88 (70%), Gaps = 1/88 (1%)
Frame = +2
Query: 1391 HRNNAEEALQKLNGTAIGKNTVRLSWGRNPANKQFRGDYGNQWTGAYYGAHIYDGYGYAM 1570
+R+NAEEALQKLNGT IGK TVRLSWGRNPANKQFR D+G+ W GAYYG +YDGYGYA+
Sbjct: 340 NRDNAEEALQKLNGTVIGKQTVRLSWGRNPANKQFRADFGSPWNGAYYGGQVYDGYGYAL 399
Query: 1571 -PPHXXXXXXXXXXXXXXXXXYDTHQQQ 1651
PPH Y +HQQQ
Sbjct: 400 PPPHDPSMYAAAAAAYGAYPIYGSHQQQ 427
Score = 92.8 bits (229), Expect(3) = e-139
Identities = 43/46 (93%), Positives = 44/46 (95%)
Frame = +3
Query: 1164 TTIFVGGLDPNVNDEDLRQPFSQYGEIVSVKIPVAKGCGFVQFANR 1301
TTIFVGGLDPNV DEDL+QPFSQYGEIVSVKIPV KGCGFVQFANR
Sbjct: 296 TTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANR 341
Score = 59.7 bits (143), Expect = 2e-06
Identities = 48/204 (23%), Positives = 92/204 (45%), Gaps = 19/204 (9%)
Frame = +2
Query: 503 TIWVGDLHNWMDEDYLRSCFAST-GEVASIKVIRNKQTGFLEGYGFVEFFSHAAAEKVLQ 679
+I+VGDL + + L+ F S V + KV+ + TG +GYGFV F + + +
Sbjct: 187 SIFVGDLAADVTDSLLQETFVSKYPSVKAAKVVFDANTGRSKGYGFVRFGDDSERTQAMT 246
Query: 680 SYTCIAMPNTEQPFRLNWAT------------------FSMGDKRSNNGSDLSIFVGDLA 805
+ + +P R+ AT + G + + ++ +IFVG L
Sbjct: 247 EMNGVYC--SSRPMRIGAATPRKSSGYQQQGGYGSNGASAQGFQSDGDSNNTTIFVGGLD 304
Query: 806 ADVTDTLLHETFATKYPSVKAAKVVLDVNTGRSKGYGFVRFGDDNERSQAMTEMNGVYCS 985
+VTD L + F+ +Y + + K+ + KG GFV+F + + +A+ ++NG
Sbjct: 305 PNVTDEDLKQPFS-QYGEIVSVKIPV------GKGCGFVQFANRDNAEEALQKLNGTVIG 357
Query: 986 SRAMRIGAATPRKSAGYQQQYSSP 1057
+ +R+ + ++ + SP
Sbjct: 358 KQTVRLSWGRNPANKQFRADFGSP 381