BLASTX nr result

ID: Panax21_contig00005163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005163
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|2...    51   6e-12
emb|CBI16624.3| unnamed protein product [Vitis vinifera]               49   4e-11
ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265...    49   4e-11
emb|CAN81311.1| hypothetical protein VITISV_016403 [Vitis vinifera]    49   4e-11
ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sa...    48   2e-10

>ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|222835317|gb|EEE73752.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score = 51.2 bits (121), Expect(2) = 6e-12
 Identities = 26/31 (83%), Positives = 27/31 (87%)
 Frame = +1

Query: 73  YEQAEFIEREME*MT*QIKSIIQVVNANQVG 165
           YEQAEFIEREME MT QIKS+IQ VNANQ G
Sbjct: 153 YEQAEFIEREMEQMTEQIKSVIQTVNANQGG 183



 Score = 43.9 bits (102), Expect(2) = 6e-12
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = +2

Query: 170 GELEASDGMTPLDVVVRILNNQSTKFIDVD 259
           GEL+A DGMTPLD+VVRILNNQ +  + +D
Sbjct: 183 GELDAIDGMTPLDMVVRILNNQLSSLMWID 212


>emb|CBI16624.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score = 48.9 bits (115), Expect(2) = 4e-11
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = +1

Query: 73  YEQAEFIEREME*MT*QIKSIIQVVNANQVG 165
           YEQAEFIEREME MT QIKSIIQ +N NQ G
Sbjct: 717 YEQAEFIEREMEQMTEQIKSIIQTLNTNQGG 747



 Score = 43.5 bits (101), Expect(2) = 4e-11
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +2

Query: 170 GELEASDGMTPLDVVVRILNNQSTKFIDVD 259
           GEL+  DGMTPLDV+VRILNNQ +  + +D
Sbjct: 747 GELDVMDGMTPLDVIVRILNNQLSSLMWID 776


>ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265039 [Vitis vinifera]
          Length = 775

 Score = 48.9 bits (115), Expect(2) = 4e-11
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = +1

Query: 73  YEQAEFIEREME*MT*QIKSIIQVVNANQVG 165
           YEQAEFIEREME MT QIKSIIQ +N NQ G
Sbjct: 684 YEQAEFIEREMEQMTEQIKSIIQTLNTNQGG 714



 Score = 43.5 bits (101), Expect(2) = 4e-11
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +2

Query: 170 GELEASDGMTPLDVVVRILNNQSTKFIDVD 259
           GEL+  DGMTPLDV+VRILNNQ +  + +D
Sbjct: 714 GELDVMDGMTPLDVIVRILNNQLSSLMWID 743


>emb|CAN81311.1| hypothetical protein VITISV_016403 [Vitis vinifera]
          Length = 279

 Score = 48.9 bits (115), Expect(2) = 4e-11
 Identities = 25/31 (80%), Positives = 26/31 (83%)
 Frame = +1

Query: 73  YEQAEFIEREME*MT*QIKSIIQVVNANQVG 165
           YEQAEFIEREME MT QIKSIIQ +N NQ G
Sbjct: 188 YEQAEFIEREMEQMTEQIKSIIQTLNTNQGG 218



 Score = 43.5 bits (101), Expect(2) = 4e-11
 Identities = 19/30 (63%), Positives = 24/30 (80%)
 Frame = +2

Query: 170 GELEASDGMTPLDVVVRILNNQSTKFIDVD 259
           GEL+  DGMTPLDV+VRILNNQ +  + +D
Sbjct: 218 GELDVMDGMTPLDVIVRILNNQLSSLMWID 247


>ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sativus]
          Length = 757

 Score = 48.1 bits (113), Expect(2) = 2e-10
 Identities = 24/31 (77%), Positives = 27/31 (87%)
 Frame = +1

Query: 73  YEQAEFIEREME*MT*QIKSIIQVVNANQVG 165
           YEQAE+IERE+E MT QIKSIIQ +NANQ G
Sbjct: 665 YEQAEYIERELEQMTEQIKSIIQTLNANQGG 695



 Score = 42.0 bits (97), Expect(2) = 2e-10
 Identities = 19/30 (63%), Positives = 23/30 (76%)
 Frame = +2

Query: 170 GELEASDGMTPLDVVVRILNNQSTKFIDVD 259
           GEL+  DGMTPLD VVRILNNQ +  + +D
Sbjct: 695 GELDVIDGMTPLDAVVRILNNQLSSLMWID 724


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