BLASTX nr result
ID: Panax21_contig00005163
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00005163 (399 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|2... 51 6e-12 emb|CBI16624.3| unnamed protein product [Vitis vinifera] 49 4e-11 ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265... 49 4e-11 emb|CAN81311.1| hypothetical protein VITISV_016403 [Vitis vinifera] 49 4e-11 ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sa... 48 2e-10 >ref|XP_002327002.1| predicted protein [Populus trichocarpa] gi|222835317|gb|EEE73752.1| predicted protein [Populus trichocarpa] Length = 241 Score = 51.2 bits (121), Expect(2) = 6e-12 Identities = 26/31 (83%), Positives = 27/31 (87%) Frame = +1 Query: 73 YEQAEFIEREME*MT*QIKSIIQVVNANQVG 165 YEQAEFIEREME MT QIKS+IQ VNANQ G Sbjct: 153 YEQAEFIEREMEQMTEQIKSVIQTVNANQGG 183 Score = 43.9 bits (102), Expect(2) = 6e-12 Identities = 20/30 (66%), Positives = 25/30 (83%) Frame = +2 Query: 170 GELEASDGMTPLDVVVRILNNQSTKFIDVD 259 GEL+A DGMTPLD+VVRILNNQ + + +D Sbjct: 183 GELDAIDGMTPLDMVVRILNNQLSSLMWID 212 >emb|CBI16624.3| unnamed protein product [Vitis vinifera] Length = 808 Score = 48.9 bits (115), Expect(2) = 4e-11 Identities = 25/31 (80%), Positives = 26/31 (83%) Frame = +1 Query: 73 YEQAEFIEREME*MT*QIKSIIQVVNANQVG 165 YEQAEFIEREME MT QIKSIIQ +N NQ G Sbjct: 717 YEQAEFIEREMEQMTEQIKSIIQTLNTNQGG 747 Score = 43.5 bits (101), Expect(2) = 4e-11 Identities = 19/30 (63%), Positives = 24/30 (80%) Frame = +2 Query: 170 GELEASDGMTPLDVVVRILNNQSTKFIDVD 259 GEL+ DGMTPLDV+VRILNNQ + + +D Sbjct: 747 GELDVMDGMTPLDVIVRILNNQLSSLMWID 776 >ref|XP_002274231.1| PREDICTED: uncharacterized protein LOC100265039 [Vitis vinifera] Length = 775 Score = 48.9 bits (115), Expect(2) = 4e-11 Identities = 25/31 (80%), Positives = 26/31 (83%) Frame = +1 Query: 73 YEQAEFIEREME*MT*QIKSIIQVVNANQVG 165 YEQAEFIEREME MT QIKSIIQ +N NQ G Sbjct: 684 YEQAEFIEREMEQMTEQIKSIIQTLNTNQGG 714 Score = 43.5 bits (101), Expect(2) = 4e-11 Identities = 19/30 (63%), Positives = 24/30 (80%) Frame = +2 Query: 170 GELEASDGMTPLDVVVRILNNQSTKFIDVD 259 GEL+ DGMTPLDV+VRILNNQ + + +D Sbjct: 714 GELDVMDGMTPLDVIVRILNNQLSSLMWID 743 >emb|CAN81311.1| hypothetical protein VITISV_016403 [Vitis vinifera] Length = 279 Score = 48.9 bits (115), Expect(2) = 4e-11 Identities = 25/31 (80%), Positives = 26/31 (83%) Frame = +1 Query: 73 YEQAEFIEREME*MT*QIKSIIQVVNANQVG 165 YEQAEFIEREME MT QIKSIIQ +N NQ G Sbjct: 188 YEQAEFIEREMEQMTEQIKSIIQTLNTNQGG 218 Score = 43.5 bits (101), Expect(2) = 4e-11 Identities = 19/30 (63%), Positives = 24/30 (80%) Frame = +2 Query: 170 GELEASDGMTPLDVVVRILNNQSTKFIDVD 259 GEL+ DGMTPLDV+VRILNNQ + + +D Sbjct: 218 GELDVMDGMTPLDVIVRILNNQLSSLMWID 247 >ref|XP_004164977.1| PREDICTED: nucleoporin nsp1-like [Cucumis sativus] Length = 757 Score = 48.1 bits (113), Expect(2) = 2e-10 Identities = 24/31 (77%), Positives = 27/31 (87%) Frame = +1 Query: 73 YEQAEFIEREME*MT*QIKSIIQVVNANQVG 165 YEQAE+IERE+E MT QIKSIIQ +NANQ G Sbjct: 665 YEQAEYIERELEQMTEQIKSIIQTLNANQGG 695 Score = 42.0 bits (97), Expect(2) = 2e-10 Identities = 19/30 (63%), Positives = 23/30 (76%) Frame = +2 Query: 170 GELEASDGMTPLDVVVRILNNQSTKFIDVD 259 GEL+ DGMTPLD VVRILNNQ + + +D Sbjct: 695 GELDVIDGMTPLDAVVRILNNQLSSLMWID 724