BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005135
         (887 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   122   2e-43
ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g1...   122   2e-43
emb|CAN65431.1| hypothetical protein VITISV_017099 [Vitis vinifera]   122   2e-43
emb|CBI38762.3| unnamed protein product [Vitis vinifera]              122   2e-43
ref|XP_002511805.1| cleavage and polyadenylation specificity fac...   109   1e-37

>ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
           [Vitis vinifera]
          Length = 382

 Score =  122 bits (306), Expect(2) = 2e-43
 Identities = 53/67 (79%), Positives = 57/67 (85%)
 Frame = -3

Query: 369 PTETVLPLEDVECCICLCAYEDGTELRELPCRNHFHCTCIDKWLYINDTCPLYKFNILKN 190
           P E V+P ED ECCICL AYED TELRELPCR+ FHCTCIDKWLYIN TCPL K NILKN
Sbjct: 314 PMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLNILKN 373

Query: 189 SNQSGCE 169
           ++QSGCE
Sbjct: 374 ASQSGCE 380



 Score = 80.5 bits (197), Expect(2) = 2e-43
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = -2

Query: 523 YSSDSKEGATKDNIDGLPKYKFRRIGDFEKQNGEIQESFSGIMTECNTDTP 371
           Y+   +EGATK+ I+ LPKYKFRRIG+ EK NGEIQESF GIMTEC+TDTP
Sbjct: 264 YTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTP 314


>ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
           [Vitis vinifera]
          Length = 365

 Score =  122 bits (306), Expect(2) = 2e-43
 Identities = 53/67 (79%), Positives = 57/67 (85%)
 Frame = -3

Query: 369 PTETVLPLEDVECCICLCAYEDGTELRELPCRNHFHCTCIDKWLYINDTCPLYKFNILKN 190
           P E V+P ED ECCICL AYED TELRELPCR+ FHCTCIDKWLYIN TCPL K NILKN
Sbjct: 297 PMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLNILKN 356

Query: 189 SNQSGCE 169
           ++QSGCE
Sbjct: 357 ASQSGCE 363



 Score = 80.5 bits (197), Expect(2) = 2e-43
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = -2

Query: 523 YSSDSKEGATKDNIDGLPKYKFRRIGDFEKQNGEIQESFSGIMTECNTDTP 371
           Y+   +EGATK+ I+ LPKYKFRRIG+ EK NGEIQESF GIMTEC+TDTP
Sbjct: 247 YTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTP 297


>emb|CAN65431.1| hypothetical protein VITISV_017099 [Vitis vinifera]
          Length = 342

 Score =  122 bits (306), Expect(2) = 2e-43
 Identities = 53/67 (79%), Positives = 57/67 (85%)
 Frame = -3

Query: 369 PTETVLPLEDVECCICLCAYEDGTELRELPCRNHFHCTCIDKWLYINDTCPLYKFNILKN 190
           P E V+P ED ECCICL AYED TELRELPCR+ FHCTCIDKWLYIN TCPL K NILKN
Sbjct: 274 PMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLNILKN 333

Query: 189 SNQSGCE 169
           ++QSGCE
Sbjct: 334 ASQSGCE 340



 Score = 80.5 bits (197), Expect(2) = 2e-43
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = -2

Query: 523 YSSDSKEGATKDNIDGLPKYKFRRIGDFEKQNGEIQESFSGIMTECNTDTP 371
           Y+   +EGATK+ I+ LPKYKFRRIG+ EK NGEIQESF GIMTEC+TDTP
Sbjct: 224 YTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTP 274


>emb|CBI38762.3| unnamed protein product [Vitis vinifera]
          Length = 329

 Score =  122 bits (306), Expect(2) = 2e-43
 Identities = 53/67 (79%), Positives = 57/67 (85%)
 Frame = -3

Query: 369 PTETVLPLEDVECCICLCAYEDGTELRELPCRNHFHCTCIDKWLYINDTCPLYKFNILKN 190
           P E V+P ED ECCICL AYED TELRELPCR+ FHCTCIDKWLYIN TCPL K NILKN
Sbjct: 261 PMEHVIPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCKLNILKN 320

Query: 189 SNQSGCE 169
           ++QSGCE
Sbjct: 321 ASQSGCE 327



 Score = 80.5 bits (197), Expect(2) = 2e-43
 Identities = 37/51 (72%), Positives = 43/51 (84%)
 Frame = -2

Query: 523 YSSDSKEGATKDNIDGLPKYKFRRIGDFEKQNGEIQESFSGIMTECNTDTP 371
           Y+   +EGATK+ I+ LPKYKFRRIG+ EK NGEIQESF GIMTEC+TDTP
Sbjct: 211 YTVADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTP 261


>ref|XP_002511805.1| cleavage and polyadenylation specificity factor, putative [Ricinus
           communis] gi|223548985|gb|EEF50474.1| cleavage and
           polyadenylation specificity factor, putative [Ricinus
           communis]
          Length = 375

 Score =  109 bits (272), Expect(2) = 1e-37
 Identities = 51/72 (70%), Positives = 54/72 (75%)
 Frame = -3

Query: 378 IRPPTETVLPLEDVECCICLCAYEDGTELRELPCRNHFHCTCIDKWLYINDTCPLYKFNI 199
           I  PTE  L  ED ECCICL AYEDGTELR+LPC++HFH TCIDKWLYIN TCPL K NI
Sbjct: 304 IDTPTERRLSHEDAECCICLSAYEDGTELRQLPCQHHFHSTCIDKWLYINATCPLCKLNI 363

Query: 198 LKNSNQSGCEEV 163
           LK SN     EV
Sbjct: 364 LKASNHIAGGEV 375



 Score = 73.9 bits (180), Expect(2) = 1e-37
 Identities = 32/54 (59%), Positives = 40/54 (74%)
 Frame = -2

Query: 523 YSSDSKEGATKDNIDGLPKYKFRRIGDFEKQNGEIQESFSGIMTECNTDTPTHR 362
           Y+   +EGAT++ I+ LP YKFRRIGDFEK N + Q +F G+MTEC  DTPT R
Sbjct: 257 YAMTDREGATQEEIEQLPMYKFRRIGDFEKVNADFQATFGGMMTECEIDTPTER 310