BLASTX nr result

ID: Panax21_contig00005122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005122
         (963 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002334078.1| predicted protein [Populus trichocarpa] gi|2...   189   6e-46
ref|XP_002316773.1| predicted protein [Populus trichocarpa] gi|2...   189   6e-46
emb|CBA11994.1| putative auxin response factor 6 [Amborella tric...   188   2e-45
ref|XP_002532983.1| Auxin response factor, putative [Ricinus com...   188   2e-45
ref|XP_003542951.1| PREDICTED: auxin response factor 6-like [Gly...   187   2e-45

>ref|XP_002334078.1| predicted protein [Populus trichocarpa] gi|222869514|gb|EEF06645.1|
           predicted protein [Populus trichocarpa]
          Length = 185

 Score =  189 bits (481), Expect = 6e-46
 Identities = 88/103 (85%), Positives = 96/103 (93%)
 Frame = -3

Query: 871 HQVHTYIMLKKDEVYAQMTLQPLNPEEQKEAFLPADLGNPSKQPTNYFCKTLTASDTSTH 692
           H V  +  ++ DEVYAQ+TLQPL+P+EQK+A+LPADLG PSKQPTNYFCKTLTASDTSTH
Sbjct: 80  HNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQPTNYFCKTLTASDTSTH 139

Query: 691 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHI 563
           GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHI
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHI 182


>ref|XP_002316773.1| predicted protein [Populus trichocarpa] gi|222859838|gb|EEE97385.1|
           predicted protein [Populus trichocarpa]
          Length = 914

 Score =  189 bits (481), Expect = 6e-46
 Identities = 88/103 (85%), Positives = 96/103 (93%)
 Frame = -3

Query: 871 HQVHTYIMLKKDEVYAQMTLQPLNPEEQKEAFLPADLGNPSKQPTNYFCKTLTASDTSTH 692
           H V  +  ++ DEVYAQ+TLQPL+P+EQK+A+LPADLG PSKQPTNYFCKTLTASDTSTH
Sbjct: 80  HNVTMHADVETDEVYAQLTLQPLSPQEQKDAYLPADLGTPSKQPTNYFCKTLTASDTSTH 139

Query: 691 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHI 563
           GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHI
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHI 182


>emb|CBA11994.1| putative auxin response factor 6 [Amborella trichopoda]
          Length = 914

 Score =  188 bits (477), Expect = 2e-45
 Identities = 88/103 (85%), Positives = 94/103 (91%)
 Frame = -3

Query: 871 HQVHTYIMLKKDEVYAQMTLQPLNPEEQKEAFLPADLGNPSKQPTNYFCKTLTASDTSTH 692
           H V  +  ++ DEVYAQMTLQPLNP+EQK+AFLPADLG   KQPTNYFCKTLTASDTSTH
Sbjct: 80  HNVTMHADVETDEVYAQMTLQPLNPQEQKDAFLPADLGTSGKQPTNYFCKTLTASDTSTH 139

Query: 691 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHI 563
           GGFSVPRRAAEKVFPPLDF+QQPPAQELIARDLHDNEWKFRHI
Sbjct: 140 GGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHI 182


>ref|XP_002532983.1| Auxin response factor, putative [Ricinus communis]
           gi|223527247|gb|EEF29407.1| Auxin response factor,
           putative [Ricinus communis]
          Length = 478

 Score =  188 bits (477), Expect = 2e-45
 Identities = 87/103 (84%), Positives = 96/103 (93%)
 Frame = -3

Query: 871 HQVHTYIMLKKDEVYAQMTLQPLNPEEQKEAFLPADLGNPSKQPTNYFCKTLTASDTSTH 692
           H V  +  ++ DEVYAQMTLQPL+P+EQK+A+LPA+LG P+KQPTNYFCKTLTASDTSTH
Sbjct: 80  HNVTMHADVETDEVYAQMTLQPLSPQEQKDAYLPAELGTPNKQPTNYFCKTLTASDTSTH 139

Query: 691 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHI 563
           GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHI
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHI 182


>ref|XP_003542951.1| PREDICTED: auxin response factor 6-like [Glycine max]
          Length = 895

 Score =  187 bits (476), Expect = 2e-45
 Identities = 88/103 (85%), Positives = 94/103 (91%)
 Frame = -3

Query: 871 HQVHTYIMLKKDEVYAQMTLQPLNPEEQKEAFLPADLGNPSKQPTNYFCKTLTASDTSTH 692
           H +  +   + DEVYAQMTLQPLNP+EQKEA+LPA+LG PSKQPTNYFCKTLTASDTSTH
Sbjct: 80  HNMTMHADAETDEVYAQMTLQPLNPQEQKEAYLPAELGTPSKQPTNYFCKTLTASDTSTH 139

Query: 691 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHI 563
           GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLH NEWKFRHI
Sbjct: 140 GGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHI 182


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