BLASTX nr result

ID: Panax21_contig00005120 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005120
         (878 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271443.2| PREDICTED: anaphase-promoting complex subuni...   457   e-126
ref|XP_002311316.1| predicted protein [Populus trichocarpa] gi|2...   443   e-122
ref|XP_003537460.1| PREDICTED: anaphase-promoting complex subuni...   436   e-120
ref|XP_002522469.1| E3 ubiquitin ligase apc2, putative [Ricinus ...   431   e-119
ref|XP_003552871.1| PREDICTED: anaphase-promoting complex subuni...   430   e-118

>ref|XP_002271443.2| PREDICTED: anaphase-promoting complex subunit 2-like [Vitis vinifera]
            gi|296086344|emb|CBI31933.3| unnamed protein product
            [Vitis vinifera]
          Length = 883

 Score =  457 bits (1177), Expect = e-126
 Identities = 229/293 (78%), Positives = 257/293 (87%), Gaps = 1/293 (0%)
 Frame = -1

Query: 878  KTDYDIDSEIRTLELLKIHFGDSSMQRCEIMLNDLIDSKRTNTNVKATIKPQSQSGSNIR 699
            K+DYDIDSEIRTLELLKIHFG+SSMQRCEIMLNDLIDSKRTN+N+KATI   SQ GS + 
Sbjct: 577  KSDYDIDSEIRTLELLKIHFGESSMQRCEIMLNDLIDSKRTNSNIKATITQPSQIGSELG 636

Query: 698  ENGVSLDVLDATIISSNFWPPIQEEALNIPGTVDKLLSDYATRFNEIKTPRTLLWKKNLG 519
            E GVSLD+LDATIISSNFWPPIQ+EALNIPG VD+LL+DYA RF++IKTPR LLWKKNLG
Sbjct: 637  ETGVSLDILDATIISSNFWPPIQDEALNIPGPVDQLLADYAKRFHKIKTPRKLLWKKNLG 696

Query: 518  TVKLELQFEDREVQFTVTPVHASIIMQFQDQTSWTSKNLAAAIGIPVDVVNRRISFWISK 339
            TVKLELQFE R VQFTV P+HA+IIMQFQDQTSWTSKNLAA+IG+PVDV+NRRI+FWISK
Sbjct: 697  TVKLELQFEGRVVQFTVAPLHAAIIMQFQDQTSWTSKNLAASIGVPVDVLNRRINFWISK 756

Query: 338  GILAESVGADSNDHIFTLVDSMVDSSKTGVSSGSCEE-LTGDEDGDKSVASVEDQLRKEM 162
            GIL+ES+  D NDHIFTLVD MV+  K  V++GSCEE L  DE+G++SVASVEDQL KEM
Sbjct: 757  GILSESLVTDPNDHIFTLVDDMVEPGKNSVNAGSCEELLVCDEEGERSVASVEDQLHKEM 816

Query: 161  TVYEKFIMGMLTNFGSMALDRIHNTLKMFCVADPAYDKXXXXXXXXXSGLIAE 3
             VYEKFIMGMLTNFGSMALDRIHNTLKMFC+ADP YDK         SGL++E
Sbjct: 817  IVYEKFIMGMLTNFGSMALDRIHNTLKMFCLADPPYDKSLQQLQSFLSGLVSE 869


>ref|XP_002311316.1| predicted protein [Populus trichocarpa] gi|222851136|gb|EEE88683.1|
            predicted protein [Populus trichocarpa]
          Length = 870

 Score =  443 bits (1139), Expect = e-122
 Identities = 218/293 (74%), Positives = 254/293 (86%), Gaps = 1/293 (0%)
 Frame = -1

Query: 878  KTDYDIDSEIRTLELLKIHFGDSSMQRCEIMLNDLIDSKRTNTNVKATIKPQSQSGSNIR 699
            K+DYDIDSEIRTLELLKIHFG+SSMQRCEIMLNDLIDSKRTN N+KATIK  +Q+GS   
Sbjct: 565  KSDYDIDSEIRTLELLKIHFGESSMQRCEIMLNDLIDSKRTNHNIKATIK-SAQTGSEPA 623

Query: 698  ENGVSLDVLDATIISSNFWPPIQEEALNIPGTVDKLLSDYATRFNEIKTPRTLLWKKNLG 519
            E G S+D+L+ATI+SSNFWPPIQ+EALN+P  V++LL+DYA RF+EIKTPR LLWKKNLG
Sbjct: 624  ETGASMDILNATILSSNFWPPIQDEALNVPEPVNQLLTDYAKRFHEIKTPRKLLWKKNLG 683

Query: 518  TVKLELQFEDREVQFTVTPVHASIIMQFQDQTSWTSKNLAAAIGIPVDVVNRRISFWISK 339
            TVKLELQFEDR +Q +V P+HA+IIMQFQDQTSWTS  LA  IG+PVDV+NRRI+FWISK
Sbjct: 684  TVKLELQFEDRTLQLSVAPIHAAIIMQFQDQTSWTSNRLATVIGVPVDVLNRRINFWISK 743

Query: 338  GILAESVGADSNDHIFTLVDSMVDSSKTGVSSGSCEELT-GDEDGDKSVASVEDQLRKEM 162
            GIL ES+G D NDH+FTLV+ +VD+ K   ++GSCEEL  GDE+G++SVASVEDQ+RKEM
Sbjct: 744  GILTESLGKDLNDHVFTLVEGIVDAGKNSGNTGSCEELLGGDEEGERSVASVEDQIRKEM 803

Query: 161  TVYEKFIMGMLTNFGSMALDRIHNTLKMFCVADPAYDKXXXXXXXXXSGLIAE 3
            T+YEKFIMGMLTNFGSMALDRIHNTLKMFCVADP YDK         SGL++E
Sbjct: 804  TIYEKFIMGMLTNFGSMALDRIHNTLKMFCVADPPYDKSLQQLQSFLSGLVSE 856


>ref|XP_003537460.1| PREDICTED: anaphase-promoting complex subunit 2-like [Glycine max]
          Length = 883

 Score =  436 bits (1121), Expect = e-120
 Identities = 211/293 (72%), Positives = 254/293 (86%), Gaps = 1/293 (0%)
 Frame = -1

Query: 878  KTDYDIDSEIRTLELLKIHFGDSSMQRCEIMLNDLIDSKRTNTNVKATIKPQSQSGSNIR 699
            K+DYDIDSEIRTLELLKIHFG+SS+Q+CEIMLNDLI SKRTN+N+KATI   SQ+   + 
Sbjct: 577  KSDYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLIGSKRTNSNIKATINQPSQTSVEVG 636

Query: 698  ENGVSLDVLDATIISSNFWPPIQEEALNIPGTVDKLLSDYATRFNEIKTPRTLLWKKNLG 519
            +N +S+D + ATIISSNFWPPIQ+E LN+P  VD+LLSDYA RFNEIKTPR L WKK+LG
Sbjct: 637  DNAISMDAISATIISSNFWPPIQDEPLNLPEPVDQLLSDYAKRFNEIKTPRKLQWKKSLG 696

Query: 518  TVKLELQFEDREVQFTVTPVHASIIMQFQDQTSWTSKNLAAAIGIPVDVVNRRISFWISK 339
            T+KLELQF+DRE+QFTV PVHASIIM+FQDQ +WTSKNLAAAIGIP DV+NRRI+FWISK
Sbjct: 697  TIKLELQFQDREIQFTVAPVHASIIMKFQDQPNWTSKNLAAAIGIPADVLNRRINFWISK 756

Query: 338  GILAESVGADSNDHIFTLVDSMVDSSKTGVSSGSCEELT-GDEDGDKSVASVEDQLRKEM 162
            GI+AES GADS+DH++T+V++M ++SK G S+G  +EL  G+E+ ++SVASVE+QLRKEM
Sbjct: 757  GIIAESQGADSSDHVYTIVENMAETSKNGASTGCAQELLGGEEEEERSVASVENQLRKEM 816

Query: 161  TVYEKFIMGMLTNFGSMALDRIHNTLKMFCVADPAYDKXXXXXXXXXSGLIAE 3
            TVYEKFI+GMLTNFGSMALDRIHNTLKMFC+ADP YDK         SGL++E
Sbjct: 817  TVYEKFILGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSE 869


>ref|XP_002522469.1| E3 ubiquitin ligase apc2, putative [Ricinus communis]
            gi|223538354|gb|EEF39961.1| E3 ubiquitin ligase apc2,
            putative [Ricinus communis]
          Length = 883

 Score =  431 bits (1109), Expect = e-119
 Identities = 218/293 (74%), Positives = 254/293 (86%), Gaps = 1/293 (0%)
 Frame = -1

Query: 878  KTDYDIDSEIRTLELLKIHFGDSSMQRCEIMLNDLIDSKRTNTNVKATIKPQSQSGSNIR 699
            K+DYDIDSEIRTLELLKI+FG+SSMQ+CEIMLNDLIDSKRT+ N+KA ++  SQ+GS  +
Sbjct: 581  KSDYDIDSEIRTLELLKINFGESSMQKCEIMLNDLIDSKRTSHNIKARMQ-SSQTGSEEK 639

Query: 698  ENGVSLDVLDATIISSNFWPPIQEEALNIPGTVDKLLSDYATRFNEIKTPRTLLWKKNLG 519
            E  +SLD+L+ATIIS+NFWPPIQEE LN+P  V+KLL +YA RF++IKTPR LLWKKNLG
Sbjct: 640  ELELSLDILNATIISTNFWPPIQEEGLNVPDPVEKLLDEYAKRFHQIKTPRKLLWKKNLG 699

Query: 518  TVKLELQFEDREVQFTVTPVHASIIMQFQDQTSWTSKNLAAAIGIPVDVVNRRISFWISK 339
            TVKLELQFEDRE+QFTVTPVHA+IIMQFQDQTSWTS  LAAAIG+P+D +NRRISFW SK
Sbjct: 700  TVKLELQFEDREMQFTVTPVHAAIIMQFQDQTSWTSCKLAAAIGVPLDALNRRISFWTSK 759

Query: 338  GILAESVGADSNDHIFTLVDSMVDSSKTGVSSGSCEE-LTGDEDGDKSVASVEDQLRKEM 162
            GILAES GA++NDH+FTLV+ M D +K G    SCE+ L GDE+G++SVASVEDQ+RKEM
Sbjct: 760  GILAESPGANANDHVFTLVEGMADVTKNG---DSCEKLLVGDEEGERSVASVEDQIRKEM 816

Query: 161  TVYEKFIMGMLTNFGSMALDRIHNTLKMFCVADPAYDKXXXXXXXXXSGLIAE 3
            TVYEKFIMGMLTNFGSMALDRIHNTLKMFCVADP YDK         SGL++E
Sbjct: 817  TVYEKFIMGMLTNFGSMALDRIHNTLKMFCVADPPYDKSLQQLQSFLSGLVSE 869


>ref|XP_003552871.1| PREDICTED: anaphase-promoting complex subunit 2-like [Glycine max]
          Length = 882

 Score =  430 bits (1106), Expect = e-118
 Identities = 209/293 (71%), Positives = 253/293 (86%), Gaps = 1/293 (0%)
 Frame = -1

Query: 878  KTDYDIDSEIRTLELLKIHFGDSSMQRCEIMLNDLIDSKRTNTNVKATIKPQSQSGSNIR 699
            K++YDIDSEIRTLELLKIHFG+SS+Q+CEIMLNDLI SKR N+N+KATI   SQ+   + 
Sbjct: 576  KSNYDIDSEIRTLELLKIHFGESSLQKCEIMLNDLIGSKRINSNIKATINQPSQTSVELG 635

Query: 698  ENGVSLDVLDATIISSNFWPPIQEEALNIPGTVDKLLSDYATRFNEIKTPRTLLWKKNLG 519
            ++ +S+DV+ ATIISSNFWPPIQ+E LN+P  VD+LLSDYA RFNEIKTPR LLWKK+LG
Sbjct: 636  DSAISMDVISATIISSNFWPPIQDEPLNLPEPVDQLLSDYAKRFNEIKTPRKLLWKKSLG 695

Query: 518  TVKLELQFEDREVQFTVTPVHASIIMQFQDQTSWTSKNLAAAIGIPVDVVNRRISFWISK 339
            T+KLELQF+DRE+QFTV PVHASIIM+FQDQ SWTSK LAAAIG+P DV+NRRI+FWISK
Sbjct: 696  TIKLELQFQDREMQFTVAPVHASIIMKFQDQPSWTSKKLAAAIGVPADVLNRRINFWISK 755

Query: 338  GILAESVGADSNDHIFTLVDSMVDSSKTGVSSGSCEELT-GDEDGDKSVASVEDQLRKEM 162
            GI+AES GADS+DH++T+V++M + SK G S+G  +EL  G+E+ ++SVASVE+QLRKEM
Sbjct: 756  GIIAESQGADSSDHVYTIVENMAEPSKNGASTGCAQELLGGEEEEERSVASVENQLRKEM 815

Query: 161  TVYEKFIMGMLTNFGSMALDRIHNTLKMFCVADPAYDKXXXXXXXXXSGLIAE 3
            TVYEKFI+GMLTNFGSMALDRIHNTLKMFC+ADP YDK         SGL++E
Sbjct: 816  TVYEKFILGMLTNFGSMALDRIHNTLKMFCIADPPYDKSLQQLQSFLSGLVSE 868


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