BLASTX nr result

ID: Panax21_contig00005118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005118
         (589 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF74982.1|AF082892_1 cystathionine gamma-synthase isoform 2 ...   169   4e-40
ref|NP_001234489.1| cystathionine gamma synthase [Solanum lycope...   164   1e-38
gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase isoform 1 ...   161   9e-38
gb|AAD31520.2|AF144102_1 cystathionine-gamma-synthase [Solanum t...   159   3e-37
ref|XP_002283866.1| PREDICTED: cystathionine gamma-synthase, chl...   153   2e-35

>gb|AAF74982.1|AF082892_1 cystathionine gamma-synthase isoform 2 [Solanum tuberosum]
          Length = 540

 Score =  169 bits (427), Expect = 4e-40
 Identities = 98/173 (56%), Positives = 118/173 (68%), Gaps = 10/173 (5%)
 Frame = +1

Query: 100 MAVSSYSRAFPSFECRSEPELSGS-PRPEIPSSGARFTGKLNSAMSHGS--FGLSSMILR 270
           MAV S +RAFPSF+CRS+P+ SG  PR ++P++G RF+ K+ S +S GS   G+SS+ILR
Sbjct: 1   MAVPSSARAFPSFQCRSDPDFSGGVPRHDLPNAGVRFSVKVKS-LSRGSSVHGMSSLILR 59

Query: 271 FPPNFVRQLSNKARRNCSNIGVAQVVAASWSNNRPXXXXXXXXXXXXXXXXXXXXXXXGN 450
           FPPNFVRQLS KARRNCSNIG+AQVVAASWSNN                         G+
Sbjct: 60  FPPNFVRQLSVKARRNCSNIGLAQVVAASWSNNHASPDFTPAAKAVDAASIAPFDITTGD 119

Query: 451 -------DCCNSNSDAQLEVLTDVQKLSFLSSDGSIAIHAGERLGRGIVTDAI 588
                  D   ++ + Q+E LTDV+  SFLSSDGSIAIHAGERLGRGIVTDAI
Sbjct: 120 EEGAVVEDSPRADRNVQIEDLTDVKYSSFLSSDGSIAIHAGERLGRGIVTDAI 172


>ref|NP_001234489.1| cystathionine gamma synthase [Solanum lycopersicum]
           gi|40806079|gb|AAR92031.1| cystathionine gamma synthase
           [Solanum lycopersicum]
          Length = 540

 Score =  164 bits (415), Expect = 1e-38
 Identities = 98/177 (55%), Positives = 114/177 (64%), Gaps = 14/177 (7%)
 Frame = +1

Query: 100 MAVSSYSRAFPSFECRSEPELSGS-PRPEIPSSGARFTGKLNSAMSHGS-FGLSSMILRF 273
           MAVSSY+RAFPSFECRSEP+ SGS P P+   +G RF+GK NS  +    +GLSS+I RF
Sbjct: 1   MAVSSYARAFPSFECRSEPDFSGSLPHPK---AGVRFSGKYNSGSNRSQVYGLSSLIYRF 57

Query: 274 PPNFVRQLSNKARRNCSNIGVAQVVAASWSNNR------------PXXXXXXXXXXXXXX 417
           PPNFVRQLS KARRNCSNIGVAQVVAASWSNN+                           
Sbjct: 58  PPNFVRQLSIKARRNCSNIGVAQVVAASWSNNQAGPEFTPAANAVDSSASAAVTSIGITT 117

Query: 418 XXXXXXXXXGNDCCNSNSDAQLEVLTDVQKLSFLSSDGSIAIHAGERLGRGIVTDAI 588
                      DC  S+ + Q++  T V+  SFL+SDGS+AIHAGERLGRGIVTDAI
Sbjct: 118 GDEEVAVVENADC--SDQNVQIKGSTGVKYASFLNSDGSVAIHAGERLGRGIVTDAI 172


>gb|AAF74981.1|AF082891_1 cystathionine gamma-synthase isoform 1 [Solanum tuberosum]
          Length = 539

 Score =  161 bits (407), Expect = 9e-38
 Identities = 98/174 (56%), Positives = 113/174 (64%), Gaps = 11/174 (6%)
 Frame = +1

Query: 100 MAVSSYSRAFPSFECRSEPELSGS-PRPEIPSSGARFTGKLNSAMSHGS-FGLSSMILRF 273
           MAVSSY+RAFPSFECRSEP+ SGS P P+   +G RF+GK NS  +    +GLSS+I RF
Sbjct: 1   MAVSSYARAFPSFECRSEPDFSGSLPHPK---AGVRFSGKYNSGSNRSQVYGLSSLIFRF 57

Query: 274 PPNFVRQLSNKARRNCSNIGVAQVVAASWSNNR--PXXXXXXXXXXXXXXXXXXXXXXXG 447
           PPNFVRQLS KARRNCSNIGVAQVVAASWSNN+  P                        
Sbjct: 58  PPNFVRQLSIKARRNCSNIGVAQVVAASWSNNQAGPEFTPAANAVDSSASAAVTSIGITA 117

Query: 448 ND---CCNSNSDAQLEVL----TDVQKLSFLSSDGSIAIHAGERLGRGIVTDAI 588
            D       N+D   + +    T V+  SFL+SDGS+AIHAGERLGRGIVTDAI
Sbjct: 118 GDEEVAVVENADCNDQNVQITGTGVKYASFLNSDGSVAIHAGERLGRGIVTDAI 171


>gb|AAD31520.2|AF144102_1 cystathionine-gamma-synthase [Solanum tuberosum]
          Length = 583

 Score =  159 bits (403), Expect = 3e-37
 Identities = 98/174 (56%), Positives = 114/174 (65%), Gaps = 11/174 (6%)
 Frame = +1

Query: 100 MAVSSYSRAFPSFECRSEPELSGS-PRPEIPSSGARFTGKLNSAMSHGS-FGLSSMILRF 273
           MAVSSY+RAFPSFECRSEP+ SGS P P+   +G R +GK NS  +    +GLSS+I RF
Sbjct: 1   MAVSSYARAFPSFECRSEPDFSGSLPHPK---AGVRLSGKYNSRSNRSQVYGLSSLIFRF 57

Query: 274 PPNFVRQLSNKARRNCSNIGVAQVVAASWSNNR--PXXXXXXXXXXXXXXXXXXXXXXXG 447
           PPNFVRQLS KARRNCSNIGVAQVVAASWSNN+  P                        
Sbjct: 58  PPNFVRQLSIKARRNCSNIGVAQVVAASWSNNQAGPEFTPAANAVDSSASAAVTSIGITA 117

Query: 448 ND-----CCNSNSDAQLEVL--TDVQKLSFLSSDGSIAIHAGERLGRGIVTDAI 588
            D       N++ + Q E +  T V+  SFL+SDGS+AIHAGERLGRGIVTDAI
Sbjct: 118 GDEEVAVVENADCNDQNEQITGTGVKYASFLNSDGSVAIHAGERLGRGIVTDAI 171


>ref|XP_002283866.1| PREDICTED: cystathionine gamma-synthase, chloroplastic-like [Vitis
           vinifera]
          Length = 531

 Score =  153 bits (386), Expect = 2e-35
 Identities = 93/167 (55%), Positives = 104/167 (62%), Gaps = 4/167 (2%)
 Frame = +1

Query: 100 MAVSSYSRAFPSFECRSEPELSGSP-RPEIPSSGARFTGKLNSAMSHGSFG---LSSMIL 267
           MAVSS  R   +FECRSEP+  G P RPE  +SG RF+GK +S  SH  FG   LSS+I 
Sbjct: 1   MAVSSCPRVSAAFECRSEPDFCGGPHRPEAFASGGRFSGKASSVPSHQIFGASALSSLIF 60

Query: 268 RFPPNFVRQLSNKARRNCSNIGVAQVVAASWSNNRPXXXXXXXXXXXXXXXXXXXXXXXG 447
           RFPPNFVRQLS KARRNCSNIGVAQVVAASWS +                          
Sbjct: 61  RFPPNFVRQLSTKARRNCSNIGVAQVVAASWSADSAAAAAASASAAAAASVEASVEVSVV 120

Query: 448 NDCCNSNSDAQLEVLTDVQKLSFLSSDGSIAIHAGERLGRGIVTDAI 588
               +S SD Q E L D +K SFL  DG++ IHAGERLGRGIVTDAI
Sbjct: 121 E---SSGSDVQYEDLAD-EKASFLGFDGTLTIHAGERLGRGIVTDAI 163


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