BLASTX nr result

ID: Panax21_contig00005103 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005103
         (1752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20846.3| unnamed protein product [Vitis vinifera]              642   0.0  
ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2...   639   0.0  
ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|2...   625   e-176
ref|XP_002516507.1| Protein pim1, putative [Ricinus communis] gi...   613   e-173
ref|XP_003522715.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...   603   e-170

>emb|CBI20846.3| unnamed protein product [Vitis vinifera]
          Length = 441

 Score =  642 bits (1657), Expect = 0.0
 Identities = 323/468 (69%), Positives = 370/468 (79%)
 Frame = -1

Query: 1608 MYGQLGDNGENSLVPHLVEGFLELNSSGSTTDGSETNTETSLKVSSLKAGGMMSLAIDNL 1429
            M GQLG + +N LVPHL+E FL L S GS TD S+T  +T LKV+++KAGGMMSLAIDNL
Sbjct: 1    MDGQLGFSDDNCLVPHLLELFLGLGSLGSLTDESDTKNKTPLKVNAVKAGGMMSLAIDNL 60

Query: 1428 GTLWMWGNCPQNISSSEGEFSLVSNYTPIPVRDFHGHTVVKVACGHEHIVALVSAGETHN 1249
            G LWMWGN P++ S  +GEFSLVS++TPIPV DFHGHTVVKVACG+EH+VALVS GET+ 
Sbjct: 61   GGLWMWGNVPES-SPDKGEFSLVSSFTPIPVWDFHGHTVVKVACGNEHVVALVSHGETYK 119

Query: 1248 GGDLICYSWGNNHKGQLGLGDKEIRLSPTLVETFNFKSPWAVYEVSCGAFHTALLAYRKS 1069
            GGDLICYSWGNN  GQLGLGD E RL P +V+TFN +S W VYEV+CGAFHTALL ++K 
Sbjct: 120  GGDLICYSWGNNGHGQLGLGDTENRLRPEVVKTFNLESLWEVYEVACGAFHTALLTHKKR 179

Query: 1068 SSDALESVCWTFGLGDNGQLGHGTTQSALAPEPVEELPKNVFLISVDCGLFHTSVVSSAG 889
             SD LES+CWTFGLGDNGQLGHGTT+    PEPV++LP++ FL+SVDCGLFHTSVVSSAG
Sbjct: 180  PSDTLESMCWTFGLGDNGQLGHGTTKGISLPEPVKDLPEHRFLVSVDCGLFHTSVVSSAG 239

Query: 888  DVFSWGMEKGLGLCPEVSFTIGDAGDAISPRLISCTELYGTKFSGAVQIGCGAAHTVLVA 709
            +V+SWGMEKGLGLCP+ SFT  D GDA SP       LYG+KF   VQ+ CGAAHTVLVA
Sbjct: 240  EVWSWGMEKGLGLCPDASFTGTDPGDAPSPL------LYGSKFRDPVQVACGAAHTVLVA 293

Query: 708  DGGYKLWSWGRGRSGVLGNGKTVDCIDPSVVLWPQLSNDLKEEILENVXXXXXXXXXXXX 529
            D GYKLWSWGRGRSGVLGNGKTVDC  PS VLWP L+ D KE  LE              
Sbjct: 294  DDGYKLWSWGRGRSGVLGNGKTVDCFAPSTVLWPPLTEDFKE--LE-------------- 337

Query: 528  XXXKLSTAMEEMKLLQIKLSIMERYASILHGSIFGKPFDEHDIPVSLQNSGTFDIAKEWK 349
                 S   +EMKLL  KLS MERYASILHGSIFGKPF+E DIP+SLQNSG FDIAKEW+
Sbjct: 338  -----SGTTKEMKLLHSKLSTMERYASILHGSIFGKPFEEQDIPISLQNSGFFDIAKEWE 392

Query: 348  NMLESSDHGKLIRLEMFYRHMLADVKEKMLKKRIKEIIKECLDSSATG 205
            NMLES+D GKL+ LE FYR+MLA VK+K++K+RI+EIIKECL   ATG
Sbjct: 393  NMLESADRGKLVMLEKFYRNMLAGVKDKLMKRRIQEIIKECLPPPATG 440


>ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 564

 Score =  639 bits (1647), Expect = 0.0
 Identities = 321/468 (68%), Positives = 369/468 (78%), Gaps = 9/468 (1%)
 Frame = -1

Query: 1581 ENSLVPHLVEGFLELNSSGSTTDGSETNTETSLKVSSLKAGGMMSLAIDNLGTLWMWGNC 1402
            +N LVPHL+E FL L S GS TD S+T  +T LKV+++KAGGMMSLAIDNLG LWMWGN 
Sbjct: 108  DNCLVPHLLELFLGLGSLGSLTDESDTKNKTPLKVNAVKAGGMMSLAIDNLGGLWMWGNV 167

Query: 1401 PQNISSSEGEFSLVSNYTPIPVRDFHGHTVVKVACGHEHIVALVSAGETHNGGDLICYSW 1222
            P++ S  +GEFSLVS++TPIPV DFHGHTVVKVACG+EH+VALVS GET+ GGDLICYSW
Sbjct: 168  PES-SPDKGEFSLVSSFTPIPVWDFHGHTVVKVACGNEHVVALVSHGETYKGGDLICYSW 226

Query: 1221 GNNHKGQLGLGDKEIRLSPTLVETFNFKSPWAVYEVSCGAFHTALLAYRKSSSDALESVC 1042
            GNN  GQLGLGD E RL P +V+TFN +S W VYEV+CGAFHTALL ++K  SD LES+C
Sbjct: 227  GNNGHGQLGLGDTENRLRPEVVKTFNLESLWEVYEVACGAFHTALLTHKKRPSDTLESMC 286

Query: 1041 WTFGLGDNGQLGHGTTQSALAPEPVEELPKNVFLISVDCGLFHTSVVSSAGDVFSWGMEK 862
            WTFGLGDNGQLGHGTT+    PEPV++LP++ FL+SVDCGLFHTSVVSSAG+V+SWGMEK
Sbjct: 287  WTFGLGDNGQLGHGTTKGISLPEPVKDLPEHRFLVSVDCGLFHTSVVSSAGEVWSWGMEK 346

Query: 861  GLGLCPEVSFTIGDAGDAISPRLISCTELYGTKFSGAVQIGCGAAHTVLVADGGYKLWSW 682
            GLGLCP+ SFT  D GDA SP       LYG+KF   VQ+ CGAAHTVLVAD GYKLWSW
Sbjct: 347  GLGLCPDASFTGTDPGDAPSPL------LYGSKFRDPVQVACGAAHTVLVADDGYKLWSW 400

Query: 681  GRGRSGVLGNGKTVDCIDPSVVLWPQLSNDLK---------EEILENVXXXXXXXXXXXX 529
            GRGRSGVLGNGKTVDC  PS VLWP L+ D K         E+ +EN             
Sbjct: 401  GRGRSGVLGNGKTVDCFAPSTVLWPPLTEDFKELESGTTSGEKKIEN-----KDPEEVTE 455

Query: 528  XXXKLSTAMEEMKLLQIKLSIMERYASILHGSIFGKPFDEHDIPVSLQNSGTFDIAKEWK 349
               +LS A EEMKLL  KLS MERYASILHGSIFGKPF+E DIP+SLQNSG FDIAKEW+
Sbjct: 456  MEKRLSLATEEMKLLHSKLSTMERYASILHGSIFGKPFEEQDIPISLQNSGFFDIAKEWE 515

Query: 348  NMLESSDHGKLIRLEMFYRHMLADVKEKMLKKRIKEIIKECLDSSATG 205
            NMLES+D GKL+ LE FYR+MLA VK+K++K+RI+EIIKECL   ATG
Sbjct: 516  NMLESADRGKLVMLEKFYRNMLAGVKDKLMKRRIQEIIKECLPPPATG 563


>ref|XP_002324218.1| predicted protein [Populus trichocarpa] gi|222865652|gb|EEF02783.1|
            predicted protein [Populus trichocarpa]
          Length = 561

 Score =  625 bits (1611), Expect = e-176
 Identities = 303/470 (64%), Positives = 361/470 (76%)
 Frame = -1

Query: 1611 NMYGQLGDNGENSLVPHLVEGFLELNSSGSTTDGSETNTETSLKVSSLKAGGMMSLAIDN 1432
            N+YGQLG +GEN  +PHL++ FLEL S GS  D SET +E  LK+ S+KAGGMMSLAID+
Sbjct: 92   NIYGQLGVSGENYSMPHLMDQFLELGSLGSLIDHSETKSEGPLKICSIKAGGMMSLAIDD 151

Query: 1431 LGTLWMWGNCPQNISSSEGEFSLVSNYTPIPVRDFHGHTVVKVACGHEHIVALVSAGETH 1252
             G LWMWGNCPQ  + +    S  S++ PIPVRDFHGH+VVKVACG EH+VALVSAGET+
Sbjct: 152  HGALWMWGNCPQQRNKTGSSISFESSFIPIPVRDFHGHSVVKVACGSEHVVALVSAGETY 211

Query: 1251 NGGDLICYSWGNNHKGQLGLGDKEIRLSPTLVETFNFKSPWAVYEVSCGAFHTALLAYRK 1072
               DL+CYSWGNN+ GQLGLGD+E R+ P +VE FN  S W VYEV+CGA+HTALL  ++
Sbjct: 212  KVEDLVCYSWGNNNHGQLGLGDRESRVHPEIVEMFNKDSSWDVYEVACGAYHTALLTRKR 271

Query: 1071 SSSDALESVCWTFGLGDNGQLGHGTTQSALAPEPVEELPKNVFLISVDCGLFHTSVVSSA 892
             + D LESVCWTFGLGDNGQLGHGTTQS L PEPV+ELP    LISVDCGLFHTSVVSS 
Sbjct: 272  RTVDPLESVCWTFGLGDNGQLGHGTTQSVLKPEPVKELPGQAHLISVDCGLFHTSVVSSV 331

Query: 891  GDVFSWGMEKGLGLCPEVSFTIGDAGDAISPRLISCTELYGTKFSGAVQIGCGAAHTVLV 712
            GDV+SWGMEKGLGLCP+ SFT  DAGDA SP L+S   + G  F   +Q+ CGAAHTVLV
Sbjct: 332  GDVWSWGMEKGLGLCPDASFTGTDAGDAASPLLMSGYGVDGPIFHNPIQVACGAAHTVLV 391

Query: 711  ADGGYKLWSWGRGRSGVLGNGKTVDCIDPSVVLWPQLSNDLKEEILENVXXXXXXXXXXX 532
            A+ GYKLWSWGRG SGVLGNGKT++C  PS VLWP L+ D K+   + V           
Sbjct: 392  ANDGYKLWSWGRGTSGVLGNGKTINCFAPSFVLWPPLTEDFKQPEPKTVGEESNGSKAVA 451

Query: 531  XXXXKLSTAMEEMKLLQIKLSIMERYASILHGSIFGKPFDEHDIPVSLQNSGTFDIAKEW 352
                +LS AMEE++LLQ KLSIME+Y  +LHG +FG+PF   DIP+SLQNSG FDIAKEW
Sbjct: 452  ETDKRLSLAMEEIELLQSKLSIMEQYGGMLHGLVFGRPFTYQDIPISLQNSGNFDIAKEW 511

Query: 351  KNMLESSDHGKLIRLEMFYRHMLADVKEKMLKKRIKEIIKECLDSSATGR 202
            ++MLES+DH KL RLE+FYR M A +K+K++K+RI+EIIKECL SS T +
Sbjct: 512  ESMLESADHSKLRRLELFYRDMRATIKDKIMKRRIQEIIKECLPSSTTAK 561


>ref|XP_002516507.1| Protein pim1, putative [Ricinus communis] gi|223544327|gb|EEF45848.1|
            Protein pim1, putative [Ricinus communis]
          Length = 565

 Score =  613 bits (1581), Expect = e-173
 Identities = 319/521 (61%), Positives = 370/521 (71%), Gaps = 4/521 (0%)
 Frame = -1

Query: 1752 WSWGYNMCILKKIVLCFLYIL*TYQINFPIFPLCFILTYLQFASLTLNMYGQLGDNGENS 1573
            W WGYN+CIL                                             + EN+
Sbjct: 97   WCWGYNICIL---------------------------------------------DPENA 111

Query: 1572 LVPHLVEGFLELNSSGSTTDGSETNTETSLKVSSLKAGGMMSLAIDNLGTLWMWGNCPQN 1393
             VP ++E F EL   GS T+ SETN E  LKV S+KAGGMMSLAIDNLG LWMWGNCPQ 
Sbjct: 112  AVPRMMEQFHELIYPGSATNESETNREVPLKVCSVKAGGMMSLAIDNLGALWMWGNCPQQ 171

Query: 1392 ISSSEGEFSLVSNYTPIPVRDFHGHTVVKVACGHEHIVALVSAGETHNGGDLICYSWGNN 1213
              +SE  FSLVS++TPIPV DF+GHTVVKVACG+EH+VALVS GET+ G DL+CYSWGNN
Sbjct: 172  --NSESGFSLVSSFTPIPVWDFYGHTVVKVACGNEHVVALVSEGETYKGEDLLCYSWGNN 229

Query: 1212 HKGQLGLGDKEIRLSPTLVETFNFKSPWAVYEVSCGAFHTALLAYRKSSSDALESVCWTF 1033
            + GQLGLGD E R+ P +VETFN  SPWAVYEVSCGAFHTALL  +K  +D L+S CWTF
Sbjct: 230  NHGQLGLGDTESRVCPEIVETFNQDSPWAVYEVSCGAFHTALLTCKKRPNDKLQSTCWTF 289

Query: 1032 GLGDNGQLGHGTTQSALAPEPVEELPKNVFLISVDCGLFHTSVVSSAGDVFSWGMEKGLG 853
            GLG+NGQLG GTTQ+AL PEPV+ELP+  +LISVDCGLFHTSVVSSAGDV+SWGM  GLG
Sbjct: 290  GLGENGQLGLGTTQNALKPEPVKELPEYAYLISVDCGLFHTSVVSSAGDVWSWGMMNGLG 349

Query: 852  LCPEVSFTIGDAGDAISPRLISCTELYGTKFSGAVQIGCGAAHTVLVADGGYKLWSWGRG 673
            LCP+  FT  DAGDAISP LI+     GTKF+  VQI CGAAHTVLV +GGYKLWSWGRG
Sbjct: 350  LCPDARFTGTDAGDAISPLLIT-----GTKFNDPVQITCGAAHTVLVTNGGYKLWSWGRG 404

Query: 672  RSGVLGNGKTVDCIDPSVVLWPQLSNDLKEE----ILENVXXXXXXXXXXXXXXXKLSTA 505
            RSG LGNGK +D + P V+LWP L+  +K +     +E                 KLS A
Sbjct: 405  RSGALGNGKEIDVLVPGVMLWPPLTEVVKNQESNNSVEEDNLVKKGSEEVTEMENKLSLA 464

Query: 504  MEEMKLLQIKLSIMERYASILHGSIFGKPFDEHDIPVSLQNSGTFDIAKEWKNMLESSDH 325
            MEEMKLLQ KL+IMERYA ILHGSIFGKPF E D+P+SLQNS TFDIAK W+ MLES+D 
Sbjct: 465  MEEMKLLQSKLTIMERYAGILHGSIFGKPFAEDDLPISLQNSDTFDIAKAWEEMLESADR 524

Query: 324  GKLIRLEMFYRHMLADVKEKMLKKRIKEIIKECLDSSATGR 202
             KLIRLE+FYR+MLA VK+K +K+RI+EII+E L S   G+
Sbjct: 525  SKLIRLEIFYRNMLAGVKDKKMKRRIQEIIQEYLPSVTPGK 565


>ref|XP_003522715.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
          Length = 559

 Score =  603 bits (1554), Expect = e-170
 Identities = 304/478 (63%), Positives = 366/478 (76%), Gaps = 12/478 (2%)
 Frame = -1

Query: 1611 NMYGQLGDNGE-----------NSLVPHLVEGFLELNSSGSTTDG-SETNTETSLKVSSL 1468
            N YGQLG NGE           NSLVP ++  FLEL+   S++ G SE  ++T LK+ ++
Sbjct: 103  NFYGQLGINGEESHDNEYAVGDNSLVPRILNKFLELHPPDSSSSGVSEAESKTPLKICAV 162

Query: 1467 KAGGMMSLAIDNLGTLWMWGNCPQNISSSEGEFSLVSNYTPIPVRDFHGHTVVKVACGHE 1288
            KAGGMMSLAIDN GTLWMWGNCP+   S EG  +LVS++TP PV DF GHTVVKVACG+E
Sbjct: 163  KAGGMMSLAIDNHGTLWMWGNCPRQ--SKEGGLALVSSFTPTPVWDFQGHTVVKVACGNE 220

Query: 1287 HIVALVSAGETHNGGDLICYSWGNNHKGQLGLGDKEIRLSPTLVETFNFKSPWAVYEVSC 1108
            H+VALVSAGET+NG DL+CYSWG N +GQLGLGD+E RL P +V TF+ +SP   YEV+C
Sbjct: 221  HVVALVSAGETYNGEDLVCYSWGYNSRGQLGLGDRESRLHPEVVRTFDEESP---YEVAC 277

Query: 1107 GAFHTALLAYRKSSSDALESVCWTFGLGDNGQLGHGTTQSALAPEPVEELPKNVFLISVD 928
            GAFHTALL  +K  SD +ES CWTFGLGDNGQLGHGTTQS L P PV+ELP+NV LI VD
Sbjct: 278  GAFHTALLTRKKKPSDTVESTCWTFGLGDNGQLGHGTTQSTLFPTPVKELPQNVSLICVD 337

Query: 927  CGLFHTSVVSSAGDVFSWGMEKGLGLCPEVSFTIGDAGDAISPRLISCTELYGTKFSGAV 748
            CGLFHTSVVSS GDV+SWGMEKGLGLCP+ S    D+GDA+SPRL+SC + +  KF   V
Sbjct: 338  CGLFHTSVVSSDGDVWSWGMEKGLGLCPDASRAGTDSGDALSPRLMSC-QPHQLKFPDPV 396

Query: 747  QIGCGAAHTVLVADGGYKLWSWGRGRSGVLGNGKTVDCIDPSVVLWPQLSNDLKEEILEN 568
            ++ CGAAHTV+VA  GY++WSWGRGRSGVLG+GK  DC  P+ VLWP    D +EE ++ 
Sbjct: 397  KVACGAAHTVIVARKGYRMWSWGRGRSGVLGDGKGFDCYTPTAVLWPSTMEDSEEEEVK- 455

Query: 567  VXXXXXXXXXXXXXXXKLSTAMEEMKLLQIKLSIMERYASILHGSIFGKPFDEHDIPVSL 388
                              S+A+ E+KLLQ KLSIME+YASILHGSIFGKPFDE DIPVSL
Sbjct: 456  ------------------SSALNELKLLQTKLSIMEKYASILHGSIFGKPFDEQDIPVSL 497

Query: 387  QNSGTFDIAKEWKNMLESSDHGKLIRLEMFYRHMLADVKEKMLKKRIKEIIKECLDSS 214
            +NSG+FDIAKEW++MLE++D  KLIRLEMFYR ML  VK++++K+RIKEI++ECL SS
Sbjct: 498  RNSGSFDIAKEWESMLEAADQRKLIRLEMFYRDMLTGVKDELMKRRIKEIVQECLQSS 555


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