BLASTX nr result
ID: Panax21_contig00005095
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00005095 (882 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002269152.1| PREDICTED: zinc finger CCCH domain-containin... 254 1e-65 ref|XP_002528658.1| conserved hypothetical protein [Ricinus comm... 249 6e-64 ref|XP_002315096.1| predicted protein [Populus trichocarpa] gi|2... 249 6e-64 ref|XP_002312214.1| predicted protein [Populus trichocarpa] gi|2... 246 5e-63 ref|XP_004148293.1| PREDICTED: zinc finger CCCH domain-containin... 245 9e-63 >ref|XP_002269152.1| PREDICTED: zinc finger CCCH domain-containing protein 37 [Vitis vinifera] gi|297736083|emb|CBI24121.3| unnamed protein product [Vitis vinifera] Length = 535 Score = 254 bits (650), Expect = 1e-65 Identities = 138/237 (58%), Positives = 150/237 (63%), Gaps = 20/237 (8%) Frame = -1 Query: 660 ITDRTSSMLYGHSDSRSSW----------PGPPGVDV---GSSAAASVDPLT-GLKRSSA 523 +T+R SSM G S S PG G V G ASVDPL GLKRSS Sbjct: 59 VTERHSSMFDGLRFSASDIGGAGAFSSRIPGGIGASVSTHGVDVGASVDPLVAGLKRSS- 117 Query: 522 ETLYHQTALGSQNTIGQSEAWFTANYLAKRPRFDGASNLPIYPQRPGEKDCAHYMLTRTC 343 E LYH + LG+ NTIGQSEAWF+ N LAKRPRF+ ASNLPIYPQRPGEKDCAHYMLTRTC Sbjct: 118 EALYHPSVLGAHNTIGQSEAWFSTNSLAKRPRFESASNLPIYPQRPGEKDCAHYMLTRTC 177 Query: 342 KFGESCKFDHPIWVPEGGIPDWKEVPLNVTSETLPERPXXXXXXXXXXXXXXXXXXXXXX 163 KFG+SCKFDHPIWVPEGGIPDWKEVP+ +E LP+RP Sbjct: 178 KFGDSCKFDHPIWVPEGGIPDWKEVPIVAANEFLPQRPGEPDCPYFMKTQKCKFGHKCKF 237 Query: 162 XXXXXALESAG------IAVLPERPYEPPCAFYTKTGNCKFGATCKFHHPKDIVIPS 10 + S G + VLPERP E PCAFY KTG CKFGATCKFHHPKDI I S Sbjct: 238 NHPKDQIISLGAPENTDVFVLPERPSELPCAFYVKTGKCKFGATCKFHHPKDIQIAS 294 >ref|XP_002528658.1| conserved hypothetical protein [Ricinus communis] gi|223531909|gb|EEF33724.1| conserved hypothetical protein [Ricinus communis] Length = 500 Score = 249 bits (636), Expect = 6e-64 Identities = 124/204 (60%), Positives = 138/204 (67%), Gaps = 7/204 (3%) Frame = -1 Query: 606 WPGPPGVDVGSSAAASVDP--LTGLKRSSAETLYHQTALGSQNTIGQSEAWFTANYLAKR 433 W PPGVDV AS++P L GLKRSS E LYH T +G+ NTIGQ+EAW++ NYL KR Sbjct: 60 WTPPPGVDV---PPASIEPHLLAGLKRSS-EVLYHPTVMGAHNTIGQTEAWYSTNYLTKR 115 Query: 432 PRFDGASNLPIYPQRPGEKDCAHYMLTRTCKFGESCKFDHPIWVPEGGIPDWKEVPLNVT 253 RF+ ASN IYPQRPGEKDCAHYMLTRTCKFG+SCKFDHP+WVPEGGIP+WKEVPL T Sbjct: 116 SRFESASNYSIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPVWVPEGGIPNWKEVPLAAT 175 Query: 252 SETLPERPXXXXXXXXXXXXXXXXXXXXXXXXXXXAL-----ESAGIAVLPERPYEPPCA 88 +E LPERP L +S + LPERP EP CA Sbjct: 176 TEPLPERPGEPDCPYFLKTQRCKYGSKCKFNHPKDELALGSSQSNDVFALPERPSEPICA 235 Query: 87 FYTKTGNCKFGATCKFHHPKDIVI 16 FY KTG CKFGATCKFHHPKDI I Sbjct: 236 FYAKTGRCKFGATCKFHHPKDIQI 259 >ref|XP_002315096.1| predicted protein [Populus trichocarpa] gi|222864136|gb|EEF01267.1| predicted protein [Populus trichocarpa] Length = 532 Score = 249 bits (636), Expect = 6e-64 Identities = 122/205 (59%), Positives = 139/205 (67%), Gaps = 5/205 (2%) Frame = -1 Query: 612 SSWPGPPGVDVGSSAAASVDPLTGLKRSSAETLYHQTALGSQNTIGQSEAWFTANYLAKR 433 SSW PPGVDV + + V GLKR+ E LYH T LG+ +TIGQSE W++ N LAKR Sbjct: 99 SSWTPPPGVDVPPAVESLVP---GLKRTP-EVLYHPTLLGAHSTIGQSEDWYSTNSLAKR 154 Query: 432 PRFDGASNLPIYPQRPGEKDCAHYMLTRTCKFGESCKFDHPIWVPEGGIPDWKEVPLNVT 253 RF+ S+ PIYPQRPGEKDCAHYMLTRTCKFG++CKFDHP+WVPEGGIPDWKEVPL T Sbjct: 155 VRFETTSHFPIYPQRPGEKDCAHYMLTRTCKFGDTCKFDHPVWVPEGGIPDWKEVPLIAT 214 Query: 252 SETLPERPXXXXXXXXXXXXXXXXXXXXXXXXXXXAL-----ESAGIAVLPERPYEPPCA 88 SET PERP L E++ ++ LPERP EPPCA Sbjct: 215 SETFPERPGEPDCPYFLKTQRCKYGLNCKFNHPKEKLSLGDSENSSVSALPERPSEPPCA 274 Query: 87 FYTKTGNCKFGATCKFHHPKDIVIP 13 FY KTG CKFGA+CKFHHPKDI IP Sbjct: 275 FYMKTGKCKFGASCKFHHPKDIQIP 299 Score = 75.1 bits (183), Expect = 2e-11 Identities = 44/123 (35%), Positives = 51/123 (41%) Frame = -1 Query: 399 YPQRPGEKDCAHYMLTRTCKFGESCKFDHPIWVPEGGIPDWKEVPLNVTSETLPERPXXX 220 YPQRPG+ +C YM T CKFGE CKF HPI + P K++ TL Sbjct: 424 YPQRPGQTECDFYMKTGECKFGERCKFHHPI---DRSAPTEKQIQQQTVKLTL------- 473 Query: 219 XXXXXXXXXXXXXXXXXXXXXXXXALESAGIAVLPERPYEPPCAFYTKTGNCKFGATCKF 40 A LP R C +Y KTG CK+GATCKF Sbjct: 474 -------------------------------AGLPRREGAVHCPYYMKTGACKYGATCKF 502 Query: 39 HHP 31 HP Sbjct: 503 DHP 505 >ref|XP_002312214.1| predicted protein [Populus trichocarpa] gi|222852034|gb|EEE89581.1| predicted protein [Populus trichocarpa] Length = 474 Score = 246 bits (628), Expect = 5e-63 Identities = 124/208 (59%), Positives = 141/208 (67%), Gaps = 6/208 (2%) Frame = -1 Query: 612 SSWPGPPGVDVGSSAAASVDPLT-GLKRSSAETLYHQTALGSQNTIGQSEAWFTANYLAK 436 SSWP PPGVD A ++VD L GLKR+ E LYH T LG+ +TIGQSE W++ N LAK Sbjct: 84 SSWPPPPGVD----APSAVDSLVPGLKRTP-EVLYHPTLLGAHSTIGQSEDWYSTNALAK 138 Query: 435 RPRFDGASNLPIYPQRPGEKDCAHYMLTRTCKFGESCKFDHPIWVPEGGIPDWKEVPLNV 256 R RF+ S+LPIYPQRPGEKDCA+YMLTRTCKFG++CKFDHP+WVPEGGIPDWKEVP Sbjct: 139 RARFETTSHLPIYPQRPGEKDCAYYMLTRTCKFGDTCKFDHPVWVPEGGIPDWKEVPPIA 198 Query: 255 TSETLPERPXXXXXXXXXXXXXXXXXXXXXXXXXXXAL-----ESAGIAVLPERPYEPPC 91 TSET P+RP + E+ I+ LPERP EPPC Sbjct: 199 TSETFPDRPGVPDCPYFLKTQRCKYGLNCKFNHPKEKMSLGVSENTSISALPERPSEPPC 258 Query: 90 AFYTKTGNCKFGATCKFHHPKDIVIPSA 7 AFY KTG CKFGATCKFHHPKDI I A Sbjct: 259 AFYMKTGICKFGATCKFHHPKDIQISLA 286 Score = 79.7 bits (195), Expect = 8e-13 Identities = 41/131 (31%), Positives = 57/131 (43%) Frame = -1 Query: 396 PQRPGEKDCAHYMLTRTCKFGESCKFDHPIWVPEGGIPDWKEVPLNVTSETLPERPXXXX 217 P RPGE DC Y+ T +CK+G +C+++HP + +N + + Sbjct: 330 PMRPGEVDCPFYLKTGSCKYGATCRYNHP-----------ERTAINPPAAAIGHPIIAPS 378 Query: 216 XXXXXXXXXXXXXXXXXXXXXXXALESAGIAVLPERPYEPPCAFYTKTGNCKFGATCKFH 37 + G V P+RP + C FY KTG CKFG TCKFH Sbjct: 379 MANLNLGVFSPAASIYQTIDPRLSTLGVGPTVYPQRPGQAECDFYMKTGECKFGETCKFH 438 Query: 36 HPKDIVIPSAE 4 HP D P+A+ Sbjct: 439 HPIDRSAPTAK 449 >ref|XP_004148293.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like [Cucumis sativus] Length = 527 Score = 245 bits (626), Expect = 9e-63 Identities = 130/225 (57%), Positives = 145/225 (64%), Gaps = 6/225 (2%) Frame = -1 Query: 660 ITDRTSSMLYGHSDSRSSWPGPPGVDVGSSAAASVDPL-TGLKRSSAETLYHQTALGSQN 484 I RTS H S+ SWPG S AA++D + +G+KRSS + LY QT LGS N Sbjct: 83 IVPRTS-----HLVSQFSWPG-------SHVAAALDSVVSGIKRSS-DVLYDQTVLGSYN 129 Query: 483 TIGQSEAWFTANYLAKRPRFDGASNLPIYPQRPGEKDCAHYMLTRTCKFGESCKFDHPIW 304 T+GQSEAW+T+N LAKRPRF+ SNLP+YPQRPGEKDCAHYMLTRTCKFG+SCKFDHPIW Sbjct: 130 TLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIW 189 Query: 303 VPEGGIPDWKEVPLNVTSETLPERPXXXXXXXXXXXXXXXXXXXXXXXXXXXALESAG-- 130 VPEGGIPDWKEVP SE LPER +S G Sbjct: 190 VPEGGIPDWKEVPQIANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAE 249 Query: 129 ---IAVLPERPYEPPCAFYTKTGNCKFGATCKFHHPKDIVIPSAE 4 + LPERP EP CAFY KTGNCKFG CKFHHPKDI I S E Sbjct: 250 KSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGE 294