BLASTX nr result

ID: Panax21_contig00005095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005095
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269152.1| PREDICTED: zinc finger CCCH domain-containin...   254   1e-65
ref|XP_002528658.1| conserved hypothetical protein [Ricinus comm...   249   6e-64
ref|XP_002315096.1| predicted protein [Populus trichocarpa] gi|2...   249   6e-64
ref|XP_002312214.1| predicted protein [Populus trichocarpa] gi|2...   246   5e-63
ref|XP_004148293.1| PREDICTED: zinc finger CCCH domain-containin...   245   9e-63

>ref|XP_002269152.1| PREDICTED: zinc finger CCCH domain-containing protein 37 [Vitis
           vinifera] gi|297736083|emb|CBI24121.3| unnamed protein
           product [Vitis vinifera]
          Length = 535

 Score =  254 bits (650), Expect = 1e-65
 Identities = 138/237 (58%), Positives = 150/237 (63%), Gaps = 20/237 (8%)
 Frame = -1

Query: 660 ITDRTSSMLYGHSDSRSSW----------PGPPGVDV---GSSAAASVDPLT-GLKRSSA 523
           +T+R SSM  G   S S            PG  G  V   G    ASVDPL  GLKRSS 
Sbjct: 59  VTERHSSMFDGLRFSASDIGGAGAFSSRIPGGIGASVSTHGVDVGASVDPLVAGLKRSS- 117

Query: 522 ETLYHQTALGSQNTIGQSEAWFTANYLAKRPRFDGASNLPIYPQRPGEKDCAHYMLTRTC 343
           E LYH + LG+ NTIGQSEAWF+ N LAKRPRF+ ASNLPIYPQRPGEKDCAHYMLTRTC
Sbjct: 118 EALYHPSVLGAHNTIGQSEAWFSTNSLAKRPRFESASNLPIYPQRPGEKDCAHYMLTRTC 177

Query: 342 KFGESCKFDHPIWVPEGGIPDWKEVPLNVTSETLPERPXXXXXXXXXXXXXXXXXXXXXX 163
           KFG+SCKFDHPIWVPEGGIPDWKEVP+   +E LP+RP                      
Sbjct: 178 KFGDSCKFDHPIWVPEGGIPDWKEVPIVAANEFLPQRPGEPDCPYFMKTQKCKFGHKCKF 237

Query: 162 XXXXXALESAG------IAVLPERPYEPPCAFYTKTGNCKFGATCKFHHPKDIVIPS 10
                 + S G      + VLPERP E PCAFY KTG CKFGATCKFHHPKDI I S
Sbjct: 238 NHPKDQIISLGAPENTDVFVLPERPSELPCAFYVKTGKCKFGATCKFHHPKDIQIAS 294


>ref|XP_002528658.1| conserved hypothetical protein [Ricinus communis]
           gi|223531909|gb|EEF33724.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 500

 Score =  249 bits (636), Expect = 6e-64
 Identities = 124/204 (60%), Positives = 138/204 (67%), Gaps = 7/204 (3%)
 Frame = -1

Query: 606 WPGPPGVDVGSSAAASVDP--LTGLKRSSAETLYHQTALGSQNTIGQSEAWFTANYLAKR 433
           W  PPGVDV     AS++P  L GLKRSS E LYH T +G+ NTIGQ+EAW++ NYL KR
Sbjct: 60  WTPPPGVDV---PPASIEPHLLAGLKRSS-EVLYHPTVMGAHNTIGQTEAWYSTNYLTKR 115

Query: 432 PRFDGASNLPIYPQRPGEKDCAHYMLTRTCKFGESCKFDHPIWVPEGGIPDWKEVPLNVT 253
            RF+ ASN  IYPQRPGEKDCAHYMLTRTCKFG+SCKFDHP+WVPEGGIP+WKEVPL  T
Sbjct: 116 SRFESASNYSIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPVWVPEGGIPNWKEVPLAAT 175

Query: 252 SETLPERPXXXXXXXXXXXXXXXXXXXXXXXXXXXAL-----ESAGIAVLPERPYEPPCA 88
           +E LPERP                            L     +S  +  LPERP EP CA
Sbjct: 176 TEPLPERPGEPDCPYFLKTQRCKYGSKCKFNHPKDELALGSSQSNDVFALPERPSEPICA 235

Query: 87  FYTKTGNCKFGATCKFHHPKDIVI 16
           FY KTG CKFGATCKFHHPKDI I
Sbjct: 236 FYAKTGRCKFGATCKFHHPKDIQI 259


>ref|XP_002315096.1| predicted protein [Populus trichocarpa] gi|222864136|gb|EEF01267.1|
           predicted protein [Populus trichocarpa]
          Length = 532

 Score =  249 bits (636), Expect = 6e-64
 Identities = 122/205 (59%), Positives = 139/205 (67%), Gaps = 5/205 (2%)
 Frame = -1

Query: 612 SSWPGPPGVDVGSSAAASVDPLTGLKRSSAETLYHQTALGSQNTIGQSEAWFTANYLAKR 433
           SSW  PPGVDV  +  + V    GLKR+  E LYH T LG+ +TIGQSE W++ N LAKR
Sbjct: 99  SSWTPPPGVDVPPAVESLVP---GLKRTP-EVLYHPTLLGAHSTIGQSEDWYSTNSLAKR 154

Query: 432 PRFDGASNLPIYPQRPGEKDCAHYMLTRTCKFGESCKFDHPIWVPEGGIPDWKEVPLNVT 253
            RF+  S+ PIYPQRPGEKDCAHYMLTRTCKFG++CKFDHP+WVPEGGIPDWKEVPL  T
Sbjct: 155 VRFETTSHFPIYPQRPGEKDCAHYMLTRTCKFGDTCKFDHPVWVPEGGIPDWKEVPLIAT 214

Query: 252 SETLPERPXXXXXXXXXXXXXXXXXXXXXXXXXXXAL-----ESAGIAVLPERPYEPPCA 88
           SET PERP                            L     E++ ++ LPERP EPPCA
Sbjct: 215 SETFPERPGEPDCPYFLKTQRCKYGLNCKFNHPKEKLSLGDSENSSVSALPERPSEPPCA 274

Query: 87  FYTKTGNCKFGATCKFHHPKDIVIP 13
           FY KTG CKFGA+CKFHHPKDI IP
Sbjct: 275 FYMKTGKCKFGASCKFHHPKDIQIP 299



 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 44/123 (35%), Positives = 51/123 (41%)
 Frame = -1

Query: 399 YPQRPGEKDCAHYMLTRTCKFGESCKFDHPIWVPEGGIPDWKEVPLNVTSETLPERPXXX 220
           YPQRPG+ +C  YM T  CKFGE CKF HPI   +   P  K++       TL       
Sbjct: 424 YPQRPGQTECDFYMKTGECKFGERCKFHHPI---DRSAPTEKQIQQQTVKLTL------- 473

Query: 219 XXXXXXXXXXXXXXXXXXXXXXXXALESAGIAVLPERPYEPPCAFYTKTGNCKFGATCKF 40
                                          A LP R     C +Y KTG CK+GATCKF
Sbjct: 474 -------------------------------AGLPRREGAVHCPYYMKTGACKYGATCKF 502

Query: 39  HHP 31
            HP
Sbjct: 503 DHP 505


>ref|XP_002312214.1| predicted protein [Populus trichocarpa] gi|222852034|gb|EEE89581.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  246 bits (628), Expect = 5e-63
 Identities = 124/208 (59%), Positives = 141/208 (67%), Gaps = 6/208 (2%)
 Frame = -1

Query: 612 SSWPGPPGVDVGSSAAASVDPLT-GLKRSSAETLYHQTALGSQNTIGQSEAWFTANYLAK 436
           SSWP PPGVD    A ++VD L  GLKR+  E LYH T LG+ +TIGQSE W++ N LAK
Sbjct: 84  SSWPPPPGVD----APSAVDSLVPGLKRTP-EVLYHPTLLGAHSTIGQSEDWYSTNALAK 138

Query: 435 RPRFDGASNLPIYPQRPGEKDCAHYMLTRTCKFGESCKFDHPIWVPEGGIPDWKEVPLNV 256
           R RF+  S+LPIYPQRPGEKDCA+YMLTRTCKFG++CKFDHP+WVPEGGIPDWKEVP   
Sbjct: 139 RARFETTSHLPIYPQRPGEKDCAYYMLTRTCKFGDTCKFDHPVWVPEGGIPDWKEVPPIA 198

Query: 255 TSETLPERPXXXXXXXXXXXXXXXXXXXXXXXXXXXAL-----ESAGIAVLPERPYEPPC 91
           TSET P+RP                            +     E+  I+ LPERP EPPC
Sbjct: 199 TSETFPDRPGVPDCPYFLKTQRCKYGLNCKFNHPKEKMSLGVSENTSISALPERPSEPPC 258

Query: 90  AFYTKTGNCKFGATCKFHHPKDIVIPSA 7
           AFY KTG CKFGATCKFHHPKDI I  A
Sbjct: 259 AFYMKTGICKFGATCKFHHPKDIQISLA 286



 Score = 79.7 bits (195), Expect = 8e-13
 Identities = 41/131 (31%), Positives = 57/131 (43%)
 Frame = -1

Query: 396 PQRPGEKDCAHYMLTRTCKFGESCKFDHPIWVPEGGIPDWKEVPLNVTSETLPERPXXXX 217
           P RPGE DC  Y+ T +CK+G +C+++HP           +   +N  +  +        
Sbjct: 330 PMRPGEVDCPFYLKTGSCKYGATCRYNHP-----------ERTAINPPAAAIGHPIIAPS 378

Query: 216 XXXXXXXXXXXXXXXXXXXXXXXALESAGIAVLPERPYEPPCAFYTKTGNCKFGATCKFH 37
                                  +    G  V P+RP +  C FY KTG CKFG TCKFH
Sbjct: 379 MANLNLGVFSPAASIYQTIDPRLSTLGVGPTVYPQRPGQAECDFYMKTGECKFGETCKFH 438

Query: 36  HPKDIVIPSAE 4
           HP D   P+A+
Sbjct: 439 HPIDRSAPTAK 449


>ref|XP_004148293.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
           [Cucumis sativus]
          Length = 527

 Score =  245 bits (626), Expect = 9e-63
 Identities = 130/225 (57%), Positives = 145/225 (64%), Gaps = 6/225 (2%)
 Frame = -1

Query: 660 ITDRTSSMLYGHSDSRSSWPGPPGVDVGSSAAASVDPL-TGLKRSSAETLYHQTALGSQN 484
           I  RTS     H  S+ SWPG       S  AA++D + +G+KRSS + LY QT LGS N
Sbjct: 83  IVPRTS-----HLVSQFSWPG-------SHVAAALDSVVSGIKRSS-DVLYDQTVLGSYN 129

Query: 483 TIGQSEAWFTANYLAKRPRFDGASNLPIYPQRPGEKDCAHYMLTRTCKFGESCKFDHPIW 304
           T+GQSEAW+T+N LAKRPRF+  SNLP+YPQRPGEKDCAHYMLTRTCKFG+SCKFDHPIW
Sbjct: 130 TLGQSEAWYTSNSLAKRPRFESTSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIW 189

Query: 303 VPEGGIPDWKEVPLNVTSETLPERPXXXXXXXXXXXXXXXXXXXXXXXXXXXALESAG-- 130
           VPEGGIPDWKEVP    SE LPER                              +S G  
Sbjct: 190 VPEGGIPDWKEVPQIANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAE 249

Query: 129 ---IAVLPERPYEPPCAFYTKTGNCKFGATCKFHHPKDIVIPSAE 4
               + LPERP EP CAFY KTGNCKFG  CKFHHPKDI I S E
Sbjct: 250 KSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGE 294


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