BLASTX nr result

ID: Panax21_contig00005088 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005088
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316895.1| predicted protein [Populus trichocarpa] gi|2...   146   2e-33
ref|XP_002285008.1| PREDICTED: probable serine/threonine-protein...   140   1e-31
emb|CBI20299.3| unnamed protein product [Vitis vinifera]              140   1e-31
ref|XP_002329133.1| predicted protein [Populus trichocarpa] gi|2...   140   2e-31
ref|XP_004146248.1| PREDICTED: probable serine/threonine-protein...   135   5e-30

>ref|XP_002316895.1| predicted protein [Populus trichocarpa] gi|222859960|gb|EEE97507.1|
           predicted protein [Populus trichocarpa]
          Length = 713

 Score =  146 bits (369), Expect = 2e-33
 Identities = 75/126 (59%), Positives = 87/126 (69%), Gaps = 10/126 (7%)
 Frame = -1

Query: 581 EKPGSSQQETPKVMGRFPGSFKETSELMRKQD----------HNPNEDGRNSNKDPILLG 432
           E+ G +Q E PK+M RFPGSFKETSE   +QD           +  EDGRNS+KDP+LLG
Sbjct: 588 ERSGLAQPEVPKLMARFPGSFKETSESFTQQDPRHPSQGVAGFHQKEDGRNSSKDPVLLG 647

Query: 431 YGSKGNKIHYSGPLLAPAGKVDQMLKDHDRHIQEAXXXXXXXXXXXXXVQVEGNQLSTNS 252
           YGSKG+KIHYSGPL+ P+G VDQMLKDHDR IQEA             VQ E NQ+STNS
Sbjct: 648 YGSKGHKIHYSGPLIVPSGNVDQMLKDHDRQIQEAVRRARLDKEKVRKVQAESNQISTNS 707

Query: 251 LFISGR 234
           LF+SGR
Sbjct: 708 LFVSGR 713


>ref|XP_002285008.1| PREDICTED: probable serine/threonine-protein kinase At1g54610-like
           [Vitis vinifera]
          Length = 713

 Score =  140 bits (354), Expect = 1e-31
 Identities = 74/127 (58%), Positives = 87/127 (68%), Gaps = 10/127 (7%)
 Frame = -1

Query: 584 REKPGSSQQETPKVMGRFPGSFKETSELMRKQDHN----------PNEDGRNSNKDPILL 435
           REK GSSQ +  K++ RFPGSFKE SE   +QD              EDGR ++KDP+LL
Sbjct: 587 REKSGSSQPDVSKLIVRFPGSFKEASESTIQQDQKHQMQGAGRCTQKEDGRMTSKDPVLL 646

Query: 434 GYGSKGNKIHYSGPLLAPAGKVDQMLKDHDRHIQEAXXXXXXXXXXXXXVQVEGNQLSTN 255
           GYGSKG+KIHYSGPLL P+GKVDQMLKDHDR IQ+A             VQVEGN++S N
Sbjct: 647 GYGSKGHKIHYSGPLLVPSGKVDQMLKDHDRQIQDAERRARLDREKLRKVQVEGNKISAN 706

Query: 254 SLFISGR 234
           SLF+SGR
Sbjct: 707 SLFVSGR 713


>emb|CBI20299.3| unnamed protein product [Vitis vinifera]
          Length = 712

 Score =  140 bits (354), Expect = 1e-31
 Identities = 74/127 (58%), Positives = 87/127 (68%), Gaps = 10/127 (7%)
 Frame = -1

Query: 584 REKPGSSQQETPKVMGRFPGSFKETSELMRKQDHN----------PNEDGRNSNKDPILL 435
           REK GSSQ +  K++ RFPGSFKE SE   +QD              EDGR ++KDP+LL
Sbjct: 586 REKSGSSQPDVSKLIVRFPGSFKEASESTIQQDQKHQMQGAGRCTQKEDGRMTSKDPVLL 645

Query: 434 GYGSKGNKIHYSGPLLAPAGKVDQMLKDHDRHIQEAXXXXXXXXXXXXXVQVEGNQLSTN 255
           GYGSKG+KIHYSGPLL P+GKVDQMLKDHDR IQ+A             VQVEGN++S N
Sbjct: 646 GYGSKGHKIHYSGPLLVPSGKVDQMLKDHDRQIQDAERRARLDREKLRKVQVEGNKISAN 705

Query: 254 SLFISGR 234
           SLF+SGR
Sbjct: 706 SLFVSGR 712


>ref|XP_002329133.1| predicted protein [Populus trichocarpa] gi|222869802|gb|EEF06933.1|
           predicted protein [Populus trichocarpa]
          Length = 713

 Score =  140 bits (352), Expect = 2e-31
 Identities = 72/127 (56%), Positives = 85/127 (66%), Gaps = 10/127 (7%)
 Frame = -1

Query: 584 REKPGSSQQETPKVMGRFPGSFKETSELMRKQD----------HNPNEDGRNSNKDPILL 435
           RE+ G SQ E PK+M RFPGSFKETSE   +QD           +  EDGRN++KDP+LL
Sbjct: 587 RERSGLSQPEVPKLMARFPGSFKETSESFAQQDPQRLSQGVAGSHQKEDGRNNSKDPVLL 646

Query: 434 GYGSKGNKIHYSGPLLAPAGKVDQMLKDHDRHIQEAXXXXXXXXXXXXXVQVEGNQLSTN 255
           GYGSK +KIHYSGPL+ P+G +DQMLKDHDR IQEA             VQ E  Q+S N
Sbjct: 647 GYGSKAHKIHYSGPLIVPSGNMDQMLKDHDRQIQEAVRRARFDKARVRKVQAESYQISAN 706

Query: 254 SLFISGR 234
           SLF+SGR
Sbjct: 707 SLFVSGR 713


>ref|XP_004146248.1| PREDICTED: probable serine/threonine-protein kinase At1g54610-like
           [Cucumis sativus] gi|449526203|ref|XP_004170103.1|
           PREDICTED: probable serine/threonine-protein kinase
           At1g54610-like [Cucumis sativus]
          Length = 707

 Score =  135 bits (340), Expect = 5e-30
 Identities = 70/125 (56%), Positives = 84/125 (67%), Gaps = 8/125 (6%)
 Frame = -1

Query: 584 REKPGSSQQETPKVMGRFPGSFKETSELMRKQDHN--------PNEDGRNSNKDPILLGY 429
           REK  SSQ E  K++GRFPGSFKETSE     D           ++  R+S KDPI++GY
Sbjct: 583 REKSDSSQGEVQKLIGRFPGSFKETSESSMLPDQKFSNHSIAGSHDKERSSTKDPIVVGY 642

Query: 428 GSKGNKIHYSGPLLAPAGKVDQMLKDHDRHIQEAXXXXXXXXXXXXXVQVEGNQLSTNSL 249
           GSKG+KIHYSGPLL P+G +DQMLKDHDRHIQEA             +Q +G Q+STNSL
Sbjct: 643 GSKGHKIHYSGPLLVPSGNMDQMLKDHDRHIQEAVRRARLDKAKVRKIQADGKQISTNSL 702

Query: 248 FISGR 234
           F+SGR
Sbjct: 703 FVSGR 707


Top