BLASTX nr result

ID: Panax21_contig00005078 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005078
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297811.1| predicted protein [Populus trichocarpa] gi|2...   139   7e-31
ref|XP_002304710.1| predicted protein [Populus trichocarpa] gi|1...   130   3e-28
ref|XP_002267189.2| PREDICTED: uncharacterized protein LOC100245...   120   2e-25
ref|NP_189058.1| putative type 1 membrane protein [Arabidopsis t...   115   6e-24
ref|XP_002518115.1| PMP, putative [Ricinus communis] gi|22354271...   115   1e-23

>ref|XP_002297811.1| predicted protein [Populus trichocarpa] gi|222845069|gb|EEE82616.1|
           predicted protein [Populus trichocarpa]
          Length = 372

 Score =  139 bits (349), Expect = 7e-31
 Identities = 72/111 (64%), Positives = 88/111 (79%)
 Frame = -2

Query: 688 LFVTLISKIFDSLQTAHKGKIVGVIFFXXXXXXXXXSILDVKIHSRPSPRWLEEKKGGPR 509
           L +T +SK+FDSLQTA+KG+I GVIFF         ++LDV + S+PS RWLEE K  P 
Sbjct: 263 LLLTTLSKMFDSLQTAYKGQIAGVIFFNTAPASESETVLDVMLTSQPSARWLEETKT-PS 321

Query: 508 SLIIAEVLLVRLTLAWLTGIILIVSTLLGIYFLLYMPITRDTLLYSNVKLD 356
           +  IAEV LVR+TLAW+TGI+LI++TLLGIY+LL MPITRDTLLYSNVKLD
Sbjct: 322 NGTIAEVALVRMTLAWITGIVLIIATLLGIYYLLNMPITRDTLLYSNVKLD 372


>ref|XP_002304710.1| predicted protein [Populus trichocarpa] gi|118488094|gb|ABK95867.1|
           unknown [Populus trichocarpa]
           gi|222842142|gb|EEE79689.1| predicted protein [Populus
           trichocarpa]
          Length = 372

 Score =  130 bits (326), Expect = 3e-28
 Identities = 67/111 (60%), Positives = 84/111 (75%)
 Frame = -2

Query: 688 LFVTLISKIFDSLQTAHKGKIVGVIFFXXXXXXXXXSILDVKIHSRPSPRWLEEKKGGPR 509
           L +T++SK+FDSLQ A+KG+IVG I F         ++L+V + SRPS RWLEE K  P 
Sbjct: 263 LLITMLSKMFDSLQAAYKGQIVGAILFNTAPAPESKTLLNVMLTSRPSARWLEETKE-PT 321

Query: 508 SLIIAEVLLVRLTLAWLTGIILIVSTLLGIYFLLYMPITRDTLLYSNVKLD 356
              IA V LVR+TLAW+TGI+LI++TLLGIYFL  MP+T+DTLLYSNVKLD
Sbjct: 322 IEAIAVVALVRITLAWITGIVLIIATLLGIYFLFSMPLTKDTLLYSNVKLD 372


>ref|XP_002267189.2| PREDICTED: uncharacterized protein LOC100245241 [Vitis vinifera]
           gi|298205266|emb|CBI17325.3| unnamed protein product
           [Vitis vinifera]
          Length = 380

 Score =  120 bits (302), Expect = 2e-25
 Identities = 65/111 (58%), Positives = 79/111 (71%)
 Frame = -2

Query: 688 LFVTLISKIFDSLQTAHKGKIVGVIFFXXXXXXXXXSILDVKIHSRPSPRWLEEKKGGPR 509
           L +T +SK+F SLQ A+KG+IVGVI F          +L+V   S+PS RWL E +  P 
Sbjct: 271 LLLTTLSKMFGSLQVAYKGQIVGVISFTGTPPSSEK-MLNVMFTSQPSARWLAETEDSPD 329

Query: 508 SLIIAEVLLVRLTLAWLTGIILIVSTLLGIYFLLYMPITRDTLLYSNVKLD 356
              I ++ LVR TLAW+TGIIL+ STLLGIYFLL MP+TRDTLLYSNVKLD
Sbjct: 330 LTAIMKIALVRKTLAWITGIILVASTLLGIYFLLNMPLTRDTLLYSNVKLD 380


>ref|NP_189058.1| putative type 1 membrane protein [Arabidopsis thaliana]
           gi|4206765|gb|AAD11797.1| putative type 1 membrane
           protein [Arabidopsis thaliana]
           gi|11994235|dbj|BAB01357.1| unnamed protein product
           [Arabidopsis thaliana] gi|15450743|gb|AAK96643.1|
           AT3g24160/MUJ8_16 [Arabidopsis thaliana]
           gi|21537239|gb|AAM61580.1| type 1 membrane protein,
           putative [Arabidopsis thaliana]
           gi|22137144|gb|AAM91417.1| AT3g24160/MUJ8_16
           [Arabidopsis thaliana] gi|332643343|gb|AEE76864.1|
           putative type 1 membrane protein [Arabidopsis thaliana]
          Length = 364

 Score =  115 bits (289), Expect = 6e-24
 Identities = 60/111 (54%), Positives = 84/111 (75%)
 Frame = -2

Query: 688 LFVTLISKIFDSLQTAHKGKIVGVIFFXXXXXXXXXSILDVKIHSRPSPRWLEEKKGGPR 509
           + ++ +SK+F+ L+T+HKG+IVGVI           ++L+    SR S R + E +G P 
Sbjct: 255 VLLSTLSKLFNLLETSHKGQIVGVIVLDERVNQESENLLNFG-SSRSSARSMVEVEGIPS 313

Query: 508 SLIIAEVLLVRLTLAWLTGIILIVSTLLGIYFLLYMPITRDTLLYSNVKLD 356
           + IIAEV+LVRLTLAWLTGIIL+++T+LG+YFL+ MP+T+DTLLYSNVKLD
Sbjct: 314 AAIIAEVILVRLTLAWLTGIILLIATILGVYFLMNMPLTKDTLLYSNVKLD 364


>ref|XP_002518115.1| PMP, putative [Ricinus communis] gi|223542711|gb|EEF44248.1| PMP,
           putative [Ricinus communis]
          Length = 369

 Score =  115 bits (287), Expect = 1e-23
 Identities = 63/112 (56%), Positives = 76/112 (67%), Gaps = 1/112 (0%)
 Frame = -2

Query: 688 LFVTLISKIFDSLQTAHKGKIVGVIFFXXXXXXXXXSILDVKIHSRPSPRWLEEKKGGPR 509
           L V  +SK+ DS Q A+KG+IVGVI            +L+V   S PS RWL E +G   
Sbjct: 258 LLVATLSKMVDSFQVAYKGQIVGVIISNERSTLESEKLLNVMFTSWPSARWLAEAEGSNA 317

Query: 508 S-LIIAEVLLVRLTLAWLTGIILIVSTLLGIYFLLYMPITRDTLLYSNVKLD 356
           +   I EV LVR TLAWLTG+IL++STL+GIY LL MP+TRDTLLYSNVKLD
Sbjct: 318 TDTAIMEVALVRKTLAWLTGLILLISTLIGIYLLLNMPLTRDTLLYSNVKLD 369


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