BLASTX nr result

ID: Panax21_contig00005075 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005075
         (811 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABS50667.1| beta-tubulin [Eucalyptus grandis]                      512   e-143
gb|AAR37366.1| beta-tubulin [Nicotiana attenuata]                     512   e-143
gb|ABB16968.1| beta-tubulin-like protein [Solanum tuberosum]          512   e-143
ref|NP_001234807.1| beta-tubulin [Solanum lycopersicum] gi|77963...   512   e-143
gb|ACH68564.1| beta-tubulin [Solanum tuberosum]                       512   e-143

>gb|ABS50667.1| beta-tubulin [Eucalyptus grandis]
          Length = 444

 Score =  512 bits (1319), Expect = e-143
 Identities = 255/269 (94%), Positives = 255/269 (94%)
 Frame = -3

Query: 809 VLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKV 630
           VLDVVRKEAENCDCLQGFQVCH             LISKIREEYPDRMMLTFSVFPSPKV
Sbjct: 115 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 174

Query: 629 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSG 450
           SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSG
Sbjct: 175 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSG 234

Query: 449 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 270
           VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD
Sbjct: 235 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 294

Query: 269 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 90
           SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD
Sbjct: 295 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 354

Query: 89  IPPTGLKMASTFVGNSTSIQEMFRRVSEQ 3
           IPP GLKMASTFVGNSTSIQEMFRRVSEQ
Sbjct: 355 IPPKGLKMASTFVGNSTSIQEMFRRVSEQ 383


>gb|AAR37366.1| beta-tubulin [Nicotiana attenuata]
          Length = 450

 Score =  512 bits (1319), Expect = e-143
 Identities = 254/269 (94%), Positives = 256/269 (95%)
 Frame = -3

Query: 809 VLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKV 630
           VLDVVRKEAENCDCLQGFQVCH             LISKIREEYPDRMMLTFSVFPSPKV
Sbjct: 119 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKV 178

Query: 629 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSG 450
           SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSG
Sbjct: 179 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 238

Query: 449 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 270
           VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD
Sbjct: 239 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 298

Query: 269 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 90
           +KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD
Sbjct: 299 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 358

Query: 89  IPPTGLKMASTFVGNSTSIQEMFRRVSEQ 3
           IPPTGLKMASTFVGNSTSIQEMFRRVSEQ
Sbjct: 359 IPPTGLKMASTFVGNSTSIQEMFRRVSEQ 387


>gb|ABB16968.1| beta-tubulin-like protein [Solanum tuberosum]
          Length = 451

 Score =  512 bits (1318), Expect = e-143
 Identities = 253/269 (94%), Positives = 256/269 (95%)
 Frame = -3

Query: 809 VLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKV 630
           VLDVVRKEAENCDCLQGFQVCH             LISK+REEYPDRMMLTFSVFPSPKV
Sbjct: 119 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKVREEYPDRMMLTFSVFPSPKV 178

Query: 629 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSG 450
           SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSG
Sbjct: 179 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 238

Query: 449 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 270
           VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD
Sbjct: 239 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 298

Query: 269 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 90
           +KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD
Sbjct: 299 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 358

Query: 89  IPPTGLKMASTFVGNSTSIQEMFRRVSEQ 3
           IPPTGLKMASTFVGNSTSIQEMFRRVSEQ
Sbjct: 359 IPPTGLKMASTFVGNSTSIQEMFRRVSEQ 387


>ref|NP_001234807.1| beta-tubulin [Solanum lycopersicum] gi|77963735|gb|ABB13293.1|
           beta-tubulin [Solanum lycopersicum]
          Length = 451

 Score =  512 bits (1318), Expect = e-143
 Identities = 253/269 (94%), Positives = 256/269 (95%)
 Frame = -3

Query: 809 VLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKV 630
           VLDVVRKEAENCDCLQGFQVCH             LISK+REEYPDRMMLTFSVFPSPKV
Sbjct: 119 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKVREEYPDRMMLTFSVFPSPKV 178

Query: 629 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSG 450
           SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSG
Sbjct: 179 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 238

Query: 449 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 270
           VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD
Sbjct: 239 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 298

Query: 269 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 90
           +KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD
Sbjct: 299 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 358

Query: 89  IPPTGLKMASTFVGNSTSIQEMFRRVSEQ 3
           IPPTGLKMASTFVGNSTSIQEMFRRVSEQ
Sbjct: 359 IPPTGLKMASTFVGNSTSIQEMFRRVSEQ 387


>gb|ACH68564.1| beta-tubulin [Solanum tuberosum]
          Length = 451

 Score =  512 bits (1318), Expect = e-143
 Identities = 253/269 (94%), Positives = 256/269 (95%)
 Frame = -3

Query: 809 VLDVVRKEAENCDCLQGFQVCHXXXXXXXXXXXXXLISKIREEYPDRMMLTFSVFPSPKV 630
           VLDVVRKEAENCDCLQGFQVCH             LISK+REEYPDRMMLTFSVFPSPKV
Sbjct: 119 VLDVVRKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKVREEYPDRMMLTFSVFPSPKV 178

Query: 629 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSG 450
           SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKL+TPSFGDLNHLISATMSG
Sbjct: 179 SDTVVEPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSG 238

Query: 449 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 270
           VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD
Sbjct: 239 VTCCLRFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYISLTVPELTQQMWD 298

Query: 269 SKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 90
           +KNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD
Sbjct: 299 AKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCD 358

Query: 89  IPPTGLKMASTFVGNSTSIQEMFRRVSEQ 3
           IPPTGLKMASTFVGNSTSIQEMFRRVSEQ
Sbjct: 359 IPPTGLKMASTFVGNSTSIQEMFRRVSEQ 387


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