BLASTX nr result

ID: Panax21_contig00005062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005062
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q99089.1|CPRF1_PETCR RecName: Full=Common plant regulatory fa...   132   5e-29
ref|XP_002279966.2| PREDICTED: common plant regulatory factor 1-...   114   1e-23
gb|AAD42937.1|AF084971_1 G-box binding protein 1 [Catharanthus r...    99   8e-19
gb|AFK38807.1| unknown [Medicago truncatula]                           97   2e-18
ref|XP_003626530.1| G-box binding factor [Medicago truncatula] g...    97   2e-18

>sp|Q99089.1|CPRF1_PETCR RecName: Full=Common plant regulatory factor 1; Short=CPRF-1
           gi|515621|emb|CAA41451.1| light-inducible protein CPRF-1
           [Petroselinum crispum] gi|1498301|gb|AAC49398.1| CPRF1
           [Petroselinum crispum]
          Length = 411

 Score =  132 bits (332), Expect = 5e-29
 Identities = 69/111 (62%), Positives = 84/111 (75%)
 Frame = -2

Query: 334 AGQNGRKRSREATPYMNGEGKIDTHINLIPSAQANTSEKVMSVTVGTARVAGKAVGTVLS 155
           A  NGRKR R+  P M GE KI+T  ++IPS +A  SEK++ +TV T  VAGK VGTV+S
Sbjct: 169 AAVNGRKRGRDEAPNMIGEVKIETQSSVIPSPRAK-SEKLLGITVATPMVAGKVVGTVVS 227

Query: 154 PSVTSSLELKDSPTANARTSPASVQPPSSGTPNESWLHNERELKRERRKQS 2
           PS+TSSLELKDSP  +A  SPA  Q PS+  PN+SWLHN+R+LKRERRKQS
Sbjct: 228 PSMTSSLELKDSPKEHAVNSPAGGQQPSTMMPNDSWLHNDRDLKRERRKQS 278


>ref|XP_002279966.2| PREDICTED: common plant regulatory factor 1-like [Vitis vinifera]
           gi|297745388|emb|CBI40468.3| unnamed protein product
           [Vitis vinifera]
          Length = 430

 Score =  114 bits (285), Expect = 1e-23
 Identities = 56/112 (50%), Positives = 78/112 (69%), Gaps = 1/112 (0%)
 Frame = -2

Query: 334 AGQNGRKRSREATPYMNGEGKIDTHINLIPSAQANT-SEKVMSVTVGTARVAGKAVGTVL 158
           A Q  RKRSRE TP + G+GK +T     PSA+ N  S+KV+ V V    V GK  G VL
Sbjct: 185 ADQTRRKRSREGTPPIGGDGKTETQATSAPSAEVNAGSDKVLGVAVPPTSVTGKLAGAVL 244

Query: 157 SPSVTSSLELKDSPTANARTSPASVQPPSSGTPNESWLHNERELKRERRKQS 2
           SP ++++LEL++ P+ NA+TSP+S+  P +  P+++W+ NERE+KRERRKQS
Sbjct: 245 SPRMSTALELRNPPSVNAKTSPSSIPQPGAMVPSDTWILNEREIKRERRKQS 296


>gb|AAD42937.1|AF084971_1 G-box binding protein 1 [Catharanthus roseus]
          Length = 426

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 58/114 (50%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
 Frame = -2

Query: 334 AGQNGRKRSREATPYMNGEGKIDTHINLIPSAQANT---SEKVMSVTVGTARVAGKAVGT 164
           AGQ  +KRSRE TP  + E K  T  +  PSA  NT   SEK M  +   A    K +G 
Sbjct: 184 AGQKNKKRSREGTPANDRERKSLTPSS--PSAAVNTNGSSEKAMRASKVPAAATEKVMGA 241

Query: 163 VLSPSVTSSLELKDSPTANARTSPASVQPPSSGTPNESWLHNERELKRERRKQS 2
           VLSP++T++ EL++   ANA+TSPA V    S  P E+WL NERELKRERRKQS
Sbjct: 242 VLSPNMTTASELRNPSAANAKTSPAKVSQSCSSLPGETWLQNERELKRERRKQS 295


>gb|AFK38807.1| unknown [Medicago truncatula]
          Length = 425

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 54/111 (48%), Positives = 76/111 (68%)
 Frame = -2

Query: 334 AGQNGRKRSREATPYMNGEGKIDTHINLIPSAQANTSEKVMSVTVGTARVAGKAVGTVLS 155
           A Q  RKRSRE TP  +GEGK +T  + I S +   S+K+M+V    A V G+ VG V S
Sbjct: 183 ANQTRRKRSREGTPTTDGEGKTNTQGSQI-SKEIAASDKMMAVA--PAGVTGQLVGPVAS 239

Query: 154 PSVTSSLELKDSPTANARTSPASVQPPSSGTPNESWLHNERELKRERRKQS 2
            ++T++LEL++S + +++T+P S   PS+  P E+W+ NERELKRERRKQS
Sbjct: 240 SAMTTALELRNSSSVHSKTNPTSTPQPSAVLPPEAWIQNERELKRERRKQS 290


>ref|XP_003626530.1| G-box binding factor [Medicago truncatula]
           gi|355501545|gb|AES82748.1| G-box binding factor
           [Medicago truncatula]
          Length = 388

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 54/111 (48%), Positives = 76/111 (68%)
 Frame = -2

Query: 334 AGQNGRKRSREATPYMNGEGKIDTHINLIPSAQANTSEKVMSVTVGTARVAGKAVGTVLS 155
           A Q  RKRSRE TP  +GEGK +T  + I S +   S+K+M+V    A V G+ VG V S
Sbjct: 146 ANQTRRKRSREGTPTTDGEGKTNTQGSQI-SKEIAASDKMMAVA--PAGVTGQLVGPVAS 202

Query: 154 PSVTSSLELKDSPTANARTSPASVQPPSSGTPNESWLHNERELKRERRKQS 2
            ++T++LEL++S + +++T+P S   PS+  P E+W+ NERELKRERRKQS
Sbjct: 203 SAMTTALELRNSSSVHSKTNPTSTPQPSAVLPPEAWIQNERELKRERRKQS 253


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