BLASTX nr result

ID: Panax21_contig00005033 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005033
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN73614.1| hypothetical protein VITISV_004108 [Vitis vinifera]   152   4e-35
ref|XP_002283554.1| PREDICTED: 60S ribosomal protein L22-2 [Viti...   150   8e-35
ref|XP_003633625.1| PREDICTED: 60S ribosomal protein L22-2-like ...   150   8e-35
ref|XP_002516939.1| 60S ribosomal protein L22, putative [Ricinus...   150   1e-34
ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|2...   150   1e-34

>emb|CAN73614.1| hypothetical protein VITISV_004108 [Vitis vinifera]
          Length = 124

 Score =  152 bits (383), Expect = 4e-35
 Identities = 78/98 (79%), Positives = 84/98 (85%)
 Frame = -3

Query: 295 TFTIDCGKPVEDKIMEIASLEKFLQERIKVGGKAGALGDAVTVIREKSKIIVTSDSDFSX 116
           TFTIDCGKPVEDKIM+IASLEKFLQERIKVGGKAGALGD+VTV REKSKI+VTS+S+FS 
Sbjct: 17  TFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKIMVTSESNFSK 76

Query: 115 XXXXXXXXXXXXKNNVRDWLRVIASNKDRNVYELRYFN 2
                       K+NVRDWLRVIASNKDRNVYELRYFN
Sbjct: 77  RYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFN 114


>ref|XP_002283554.1| PREDICTED: 60S ribosomal protein L22-2 [Vitis vinifera]
           gi|296089712|emb|CBI39531.3| unnamed protein product
           [Vitis vinifera]
          Length = 124

 Score =  150 bits (380), Expect = 8e-35
 Identities = 77/98 (78%), Positives = 84/98 (85%)
 Frame = -3

Query: 295 TFTIDCGKPVEDKIMEIASLEKFLQERIKVGGKAGALGDAVTVIREKSKIIVTSDSDFSX 116
           TFTIDCGKPVEDKIM+IASLEKFLQERIKVGGKAGALGD+VTV REKSKI+VTS+++FS 
Sbjct: 17  TFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKIMVTSENNFSK 76

Query: 115 XXXXXXXXXXXXKNNVRDWLRVIASNKDRNVYELRYFN 2
                       K+NVRDWLRVIASNKDRNVYELRYFN
Sbjct: 77  RYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFN 114


>ref|XP_003633625.1| PREDICTED: 60S ribosomal protein L22-2-like [Vitis vinifera]
           gi|147826838|emb|CAN64416.1| hypothetical protein
           VITISV_013317 [Vitis vinifera]
           gi|296089687|emb|CBI39506.3| unnamed protein product
           [Vitis vinifera]
          Length = 124

 Score =  150 bits (380), Expect = 8e-35
 Identities = 78/98 (79%), Positives = 82/98 (83%)
 Frame = -3

Query: 295 TFTIDCGKPVEDKIMEIASLEKFLQERIKVGGKAGALGDAVTVIREKSKIIVTSDSDFSX 116
           TFTIDCGKPVEDKIM+IASLEKFLQERIKVGGKAGALGD VTV REKSKI VTS+S+FS 
Sbjct: 17  TFTIDCGKPVEDKIMDIASLEKFLQERIKVGGKAGALGDTVTVTREKSKITVTSESNFSK 76

Query: 115 XXXXXXXXXXXXKNNVRDWLRVIASNKDRNVYELRYFN 2
                       K+NVRDWLRVIASNKDRNVYELRYFN
Sbjct: 77  RYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFN 114


>ref|XP_002516939.1| 60S ribosomal protein L22, putative [Ricinus communis]
           gi|223544027|gb|EEF45553.1| 60S ribosomal protein L22,
           putative [Ricinus communis]
          Length = 127

 Score =  150 bits (379), Expect = 1e-34
 Identities = 78/98 (79%), Positives = 82/98 (83%)
 Frame = -3

Query: 295 TFTIDCGKPVEDKIMEIASLEKFLQERIKVGGKAGALGDAVTVIREKSKIIVTSDSDFSX 116
           TFTIDC KPVEDKIM+IASLEKFLQERIKVGGKAGALGD+VTV REKSKI VTSDS+FS 
Sbjct: 20  TFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSKITVTSDSNFSK 79

Query: 115 XXXXXXXXXXXXKNNVRDWLRVIASNKDRNVYELRYFN 2
                       K+NVRDWLRVIASNKDRNVYELRYFN
Sbjct: 80  RYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFN 117


>ref|XP_002319510.1| predicted protein [Populus trichocarpa] gi|222857886|gb|EEE95433.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  150 bits (379), Expect = 1e-34
 Identities = 78/98 (79%), Positives = 82/98 (83%)
 Frame = -3

Query: 295 TFTIDCGKPVEDKIMEIASLEKFLQERIKVGGKAGALGDAVTVIREKSKIIVTSDSDFSX 116
           TFTIDC KPVEDKIM+IASLEKFLQERIKVGGKAGALGDAVTV REK+KI VTSDS+FS 
Sbjct: 10  TFTIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDAVTVTREKNKITVTSDSNFSK 69

Query: 115 XXXXXXXXXXXXKNNVRDWLRVIASNKDRNVYELRYFN 2
                       K+NVRDWLRVIASNKDRNVYELRYFN
Sbjct: 70  RYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFN 107


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