BLASTX nr result

ID: Panax21_contig00005023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005023
         (820 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22851.3| unnamed protein product [Vitis vinifera]              184   2e-44
ref|XP_002280085.1| PREDICTED: transmembrane protein 93-like [Vi...   184   2e-44
ref|XP_003594698.1| Transmembrane protein [Medicago truncatula] ...   179   5e-43
ref|XP_003597429.1| Transmembrane protein [Medicago truncatula] ...   177   2e-42
ref|XP_002311375.1| predicted protein [Populus trichocarpa] gi|2...   177   2e-42

>emb|CBI22851.3| unnamed protein product [Vitis vinifera]
          Length = 474

 Score =  184 bits (468), Expect = 2e-44
 Identities = 89/119 (74%), Positives = 105/119 (88%), Gaps = 2/119 (1%)
 Frame = +3

Query: 237 MVGHDDSG-SEKKSSDI-NDLPTFNVENMQSNMKVIYYSRTFMSIIGGVIAGVLGFTGLM 410
           M G +DSG SEKKS++  ND+PTFN EN+QSNMK+IYYSRTF+SIIGGVIAG+LGFTG  
Sbjct: 355 MAGRNDSGASEKKSNEATNDMPTFNAENLQSNMKIIYYSRTFLSIIGGVIAGILGFTGFT 414

Query: 411 GFVFYFLVMAITSLGLTAKAGFSIHSFFDSWNRIILDGFLGGLMSFVLFWTYPIFVLYV 587
           GF+FYFLVMAITS+GL AKA FS+HS+FDSWNRIILDGFLGGLMSFVLFWT    ++++
Sbjct: 415 GFIFYFLVMAITSVGLMAKAKFSVHSYFDSWNRIILDGFLGGLMSFVLFWTLAYDIVHI 473


>ref|XP_002280085.1| PREDICTED: transmembrane protein 93-like [Vitis vinifera]
          Length = 120

 Score =  184 bits (468), Expect = 2e-44
 Identities = 89/119 (74%), Positives = 105/119 (88%), Gaps = 2/119 (1%)
 Frame = +3

Query: 237 MVGHDDSG-SEKKSSDI-NDLPTFNVENMQSNMKVIYYSRTFMSIIGGVIAGVLGFTGLM 410
           M G +DSG SEKKS++  ND+PTFN EN+QSNMK+IYYSRTF+SIIGGVIAG+LGFTG  
Sbjct: 1   MAGRNDSGASEKKSNEATNDMPTFNAENLQSNMKIIYYSRTFLSIIGGVIAGILGFTGFT 60

Query: 411 GFVFYFLVMAITSLGLTAKAGFSIHSFFDSWNRIILDGFLGGLMSFVLFWTYPIFVLYV 587
           GF+FYFLVMAITS+GL AKA FS+HS+FDSWNRIILDGFLGGLMSFVLFWT    ++++
Sbjct: 61  GFIFYFLVMAITSVGLMAKAKFSVHSYFDSWNRIILDGFLGGLMSFVLFWTLAYDIVHI 119


>ref|XP_003594698.1| Transmembrane protein [Medicago truncatula]
           gi|355483746|gb|AES64949.1| Transmembrane protein
           [Medicago truncatula]
          Length = 117

 Score =  179 bits (455), Expect = 5e-43
 Identities = 86/113 (76%), Positives = 100/113 (88%), Gaps = 2/113 (1%)
 Frame = +3

Query: 237 MVGHDDSGS-EKKSSD-INDLPTFNVENMQSNMKVIYYSRTFMSIIGGVIAGVLGFTGLM 410
           M GH  SGS EKKSS+ +N+L TFN ENMQSNMK IYYSRTF+SIIGGV+AG+LGFTGL 
Sbjct: 1   MAGHSGSGSSEKKSSNGVNELLTFNAENMQSNMKTIYYSRTFLSIIGGVVAGILGFTGLK 60

Query: 411 GFVFYFLVMAITSLGLTAKAGFSIHSFFDSWNRIILDGFLGGLMSFVLFWTYP 569
           GF+FY L+MA TS+GL AKA FSIH++FDSWNR+++DGFLGGLMSFVLFWTYP
Sbjct: 61  GFIFYVLLMAFTSVGLIAKAKFSIHTYFDSWNRVLIDGFLGGLMSFVLFWTYP 113


>ref|XP_003597429.1| Transmembrane protein [Medicago truncatula]
           gi|355486477|gb|AES67680.1| Transmembrane protein
           [Medicago truncatula]
          Length = 120

 Score =  177 bits (450), Expect = 2e-42
 Identities = 83/119 (69%), Positives = 101/119 (84%), Gaps = 2/119 (1%)
 Frame = +3

Query: 237 MVGHDDSGS--EKKSSDINDLPTFNVENMQSNMKVIYYSRTFMSIIGGVIAGVLGFTGLM 410
           M GH  SGS  +K S+ +N+L TFN ENMQSNMK+IYYSRTF+SIIGGV+AG+LGFTGL 
Sbjct: 1   MAGHSGSGSSDKKSSNGVNELLTFNAENMQSNMKIIYYSRTFLSIIGGVVAGILGFTGLK 60

Query: 411 GFVFYFLVMAITSLGLTAKAGFSIHSFFDSWNRIILDGFLGGLMSFVLFWTYPIFVLYV 587
           GFVFY L+MA TSLGL AKA FSIH++FDSWNR+++DGFLGGLMSFVLFWT+   + ++
Sbjct: 61  GFVFYALLMAFTSLGLVAKAKFSIHTYFDSWNRVLIDGFLGGLMSFVLFWTFAYDIAHI 119


>ref|XP_002311375.1| predicted protein [Populus trichocarpa] gi|222851195|gb|EEE88742.1|
           predicted protein [Populus trichocarpa]
          Length = 117

 Score =  177 bits (449), Expect = 2e-42
 Identities = 85/118 (72%), Positives = 103/118 (87%), Gaps = 1/118 (0%)
 Frame = +3

Query: 237 MVGHDDSGSEKKSSD-INDLPTFNVENMQSNMKVIYYSRTFMSIIGGVIAGVLGFTGLMG 413
           M GH++S  EKKSSD ++DL TF  EN+QSNMKVIYYSRTF+SIIGGV+AG+LGFTGL G
Sbjct: 1   MAGHNES--EKKSSDALDDLQTFRAENLQSNMKVIYYSRTFLSIIGGVVAGILGFTGLTG 58

Query: 414 FVFYFLVMAITSLGLTAKAGFSIHSFFDSWNRIILDGFLGGLMSFVLFWTYPIFVLYV 587
           FVFYFLVMAITS+ L AKA FSIH++FDSWNR++ DGFLGGLMSFVLFWT+   ++++
Sbjct: 59  FVFYFLVMAITSVALIAKAKFSIHTYFDSWNRVVFDGFLGGLMSFVLFWTFAYDIVHI 116


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