BLASTX nr result

ID: Panax21_contig00005020 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005020
         (2540 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    87   3e-14
gb|ACU23746.1| unknown [Glycine max]                                   87   3e-14
gb|ABR18062.1| unknown [Picea sitchensis]                              86   6e-14
emb|CBI36847.3| unnamed protein product [Vitis vinifera]               84   1e-13
ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like...    84   1e-13

>ref|XP_003554522.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
          Length = 309

 Score = 86.7 bits (213), Expect = 3e-14
 Identities = 41/52 (78%), Positives = 46/52 (88%), Gaps = 4/52 (7%)
 Frame = -1

Query: 293 GTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKEY----DSSRSPGH 150
           GTTGIVDYTNYDDMKYAI+KLD+SEFRNAFS+G +RV+EY    DSSRSP H
Sbjct: 148 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGYVRVREYDSRRDSSRSPSH 199


>gb|ACU23746.1| unknown [Glycine max]
          Length = 310

 Score = 86.7 bits (213), Expect = 3e-14
 Identities = 41/52 (78%), Positives = 46/52 (88%), Gaps = 4/52 (7%)
 Frame = -1

Query: 293 GTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKEY----DSSRSPGH 150
           GTTGIVDYTNYDDMKYAI+KLD+SEFRNAFS+G +RV+EY    DSSRSP H
Sbjct: 148 GTTGIVDYTNYDDMKYAIKKLDDSEFRNAFSKGYVRVREYDSRRDSSRSPSH 199


>gb|ABR18062.1| unknown [Picea sitchensis]
          Length = 331

 Score = 85.5 bits (210), Expect = 6e-14
 Identities = 41/46 (89%), Positives = 43/46 (93%)
 Frame = -1

Query: 296 AGTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKEYDSSRS 159
           +GTTGIVDYTNYDDMKYAIRKLD+SEFRNAFSRG IRVKEY S RS
Sbjct: 148 SGTTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRGYIRVKEYVSRRS 193


>emb|CBI36847.3| unnamed protein product [Vitis vinifera]
          Length = 264

 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -1

Query: 293 GTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKEYDSSRS 159
           GT GIVDYTNYDDMK+AIRKLD+SEFRNAFSR  +RVKEYDSSRS
Sbjct: 148 GTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYDSSRS 192


>ref|XP_002265998.1| PREDICTED: pre-mRNA-splicing factor SF2-like isoform 1 [Vitis
           vinifera] gi|359480272|ref|XP_003632425.1| PREDICTED:
           pre-mRNA-splicing factor SF2-like isoform 2 [Vitis
           vinifera]
          Length = 296

 Score = 84.3 bits (207), Expect = 1e-13
 Identities = 39/45 (86%), Positives = 42/45 (93%)
 Frame = -1

Query: 293 GTTGIVDYTNYDDMKYAIRKLDESEFRNAFSRGVIRVKEYDSSRS 159
           GT GIVDYTNYDDMK+AIRKLD+SEFRNAFSR  +RVKEYDSSRS
Sbjct: 148 GTVGIVDYTNYDDMKFAIRKLDDSEFRNAFSRAYVRVKEYDSSRS 192


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