BLASTX nr result

ID: Panax21_contig00005010 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005010
         (1031 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521847.1| Armadillo repeat-containing protein, putativ...   201   2e-49
ref|XP_002330318.1| predicted protein [Populus trichocarpa] gi|2...   187   3e-45
ref|NP_567943.1| RING/U-box domain-containing protein [Arabidops...   185   1e-44
dbj|BAC43725.1| unknown protein [Arabidopsis thaliana]                185   1e-44
gb|AAM62531.1| unknown [Arabidopsis thaliana]                         185   1e-44

>ref|XP_002521847.1| Armadillo repeat-containing protein, putative [Ricinus communis]
           gi|223538885|gb|EEF40483.1| Armadillo repeat-containing
           protein, putative [Ricinus communis]
          Length = 719

 Score =  201 bits (511), Expect = 2e-49
 Identities = 94/169 (55%), Positives = 120/169 (71%), Gaps = 1/169 (0%)
 Frame = +2

Query: 158 PPADDVCPICFGNFTIPFKTNCGHWFCGSCILQFWNYKASLQKCKCPICSCLISKLTPEA 337
           PP DD CPICFG FTIP K+ CGHW+CGSCILQ+WNY A+ + CKCP+C+  I+KLTPEA
Sbjct: 61  PPGDDCCPICFGTFTIPCKSICGHWYCGSCILQYWNYSAASKPCKCPMCASRITKLTPEA 120

Query: 338 CLLSR-QEKEVTEVLENVHRYNRLFEGGVRGLVQNVLASPLLIKRMFQGLMDPDRFADNY 514
            L S+ Q+++VT+VLENV RYNRLF GG  GLVQ V  SPL IKRMF  +MDPDR     
Sbjct: 121 SLYSQHQDQDVTKVLENVDRYNRLFIGGALGLVQKVRESPLFIKRMFLQMMDPDRPYSYL 180

Query: 515 HIARFVGLLVGVMYRFSPFDFIPIGRYAAHSFFELCGISLVVICCLIGL 661
           H  R   +++ V+Y  +PF+FIP G       F+   I+LV++  L+G+
Sbjct: 181 HEIRLFAMMLSVLYAATPFNFIPTGGLGIVRLFDYVAIALVLVLRLVGI 229


>ref|XP_002330318.1| predicted protein [Populus trichocarpa] gi|222871353|gb|EEF08484.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  187 bits (476), Expect = 3e-45
 Identities = 87/172 (50%), Positives = 109/172 (63%), Gaps = 2/172 (1%)
 Frame = +2

Query: 152 DSPPADDVCPICFGNFTIPFKTNCGHWFCGSCILQFWNYKASLQKCKCPICSCLISKLTP 331
           + PP DD CPICFG F +P K NCGHW+CGSCILQ+W Y     +CKCP+CS  IS LTP
Sbjct: 4   EGPPLDDCCPICFGTFDVPCKANCGHWYCGSCILQYWKYSGPSSRCKCPMCSSRISNLTP 63

Query: 332 EACLLSRQEKEVTEVLENVHRYNRLFEGGVRGLVQNVLASPLLIKRMFQGLMDPD--RFA 505
           EA L  +QE+EV +VLE+V RYN +F GGVRGL + V   P L KRM + +MDPD   F 
Sbjct: 64  EASLHGQQEQEVVKVLEDVRRYNHVFVGGVRGLARKVHVVPFLFKRMLEEMMDPDGHNFF 123

Query: 506 DNYHIARFVGLLVGVMYRFSPFDFIPIGRYAAHSFFELCGISLVVICCLIGL 661
               + R   + + ++Y  SPFDFIP+GR      FE   + L V   L G+
Sbjct: 124 LYEKLMRMFAIFLAILYISSPFDFIPLGRIGVVRLFEYMSMLLAVTLRLAGI 175


>ref|NP_567943.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
           gi|63003762|gb|AAY25410.1| At4g33940 [Arabidopsis
           thaliana] gi|87116618|gb|ABD19673.1| At4g33940
           [Arabidopsis thaliana] gi|332660897|gb|AEE86297.1|
           RING/U-box domain-containing protein [Arabidopsis
           thaliana]
          Length = 262

 Score =  185 bits (470), Expect = 1e-44
 Identities = 83/172 (48%), Positives = 116/172 (67%)
 Frame = +2

Query: 146 KNDSPPADDVCPICFGNFTIPFKTNCGHWFCGSCILQFWNYKASLQKCKCPICSCLISKL 325
           +++SPP DDVCPICFG+FT+P + NCGHW+CG+CILQ+WNY A  + CKCP+C   I+KL
Sbjct: 64  ESESPPEDDVCPICFGSFTVPCRGNCGHWYCGNCILQYWNYAAISRPCKCPMCVRHITKL 123

Query: 326 TPEACLLSRQEKEVTEVLENVHRYNRLFEGGVRGLVQNVLASPLLIKRMFQGLMDPDRFA 505
           +PE  L  RQE+EV EVL+ V RYNRLF GG+ G VQ V   P L+KRM   +MD D   
Sbjct: 124 SPEPSLQERQEQEVKEVLDKVRRYNRLFVGGLTGFVQKVHELPFLVKRMVWHMMDTDVNN 183

Query: 506 DNYHIARFVGLLVGVMYRFSPFDFIPIGRYAAHSFFELCGISLVVICCLIGL 661
             +H  R   + +  +Y  + F+FIP G +   + F+   I++++I  L+G+
Sbjct: 184 LYFHEVRIFAMFMSTLYTAAEFNFIPTGGFRIVTVFDYAAIAMILILRLVGI 235


>dbj|BAC43725.1| unknown protein [Arabidopsis thaliana]
          Length = 252

 Score =  185 bits (470), Expect = 1e-44
 Identities = 83/172 (48%), Positives = 116/172 (67%)
 Frame = +2

Query: 146 KNDSPPADDVCPICFGNFTIPFKTNCGHWFCGSCILQFWNYKASLQKCKCPICSCLISKL 325
           +++SPP DDVCPICFG+FT+P + NCGHW+CG+CILQ+WNY A  + CKCP+C   I+KL
Sbjct: 54  ESESPPEDDVCPICFGSFTVPCRGNCGHWYCGNCILQYWNYAAISRPCKCPMCVRHITKL 113

Query: 326 TPEACLLSRQEKEVTEVLENVHRYNRLFEGGVRGLVQNVLASPLLIKRMFQGLMDPDRFA 505
           +PE  L  RQE+EV EVL+ V RYNRLF GG+ G VQ V   P L+KRM   +MD D   
Sbjct: 114 SPEPSLQERQEQEVKEVLDKVRRYNRLFVGGLTGFVQKVHELPFLVKRMVWHMMDTDVNN 173

Query: 506 DNYHIARFVGLLVGVMYRFSPFDFIPIGRYAAHSFFELCGISLVVICCLIGL 661
             +H  R   + +  +Y  + F+FIP G +   + F+   I++++I  L+G+
Sbjct: 174 LYFHEVRIFAMFMSTLYTAAEFNFIPTGGFRIVTVFDYAAIAMILILRLVGI 225


>gb|AAM62531.1| unknown [Arabidopsis thaliana]
          Length = 262

 Score =  185 bits (470), Expect = 1e-44
 Identities = 83/172 (48%), Positives = 116/172 (67%)
 Frame = +2

Query: 146 KNDSPPADDVCPICFGNFTIPFKTNCGHWFCGSCILQFWNYKASLQKCKCPICSCLISKL 325
           +++SPP DDVCPICFG+FT+P + NCGHW+CG+CILQ+WNY A  + CKCP+C   I+KL
Sbjct: 64  ESESPPEDDVCPICFGSFTVPCRGNCGHWYCGNCILQYWNYAAISRPCKCPMCVRHITKL 123

Query: 326 TPEACLLSRQEKEVTEVLENVHRYNRLFEGGVRGLVQNVLASPLLIKRMFQGLMDPDRFA 505
           +PE  L  RQE+EV EVL+ V RYNRLF GG+ G VQ V   P L+KRM   +MD D   
Sbjct: 124 SPEPSLQERQEQEVKEVLDKVRRYNRLFVGGLTGFVQKVHELPFLVKRMVWHMMDTDVNN 183

Query: 506 DNYHIARFVGLLVGVMYRFSPFDFIPIGRYAAHSFFELCGISLVVICCLIGL 661
             +H  R   + +  +Y  + F+FIP G +   + F+   I++++I  L+G+
Sbjct: 184 LYFHEVRIFAMFMSTLYTAAEFNFIPTGGFRIVTVFDYAAIAMILILRLVGI 235


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