BLASTX nr result

ID: Panax21_contig00005007 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005007
         (604 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homo...   201   6e-50
gb|AFC90090.1| brix domain-containing protein [Nicotiana bentham...   199   4e-49
ref|XP_003535300.1| PREDICTED: ribosome production factor 2 homo...   198   7e-49
ref|XP_002528588.1| brix domain containing protein, putative [Ri...   197   2e-48
ref|XP_003542560.1| PREDICTED: ribosome production factor 2 homo...   194   1e-47

>ref|XP_002283513.1| PREDICTED: ribosome production factor 2 homolog [Vitis vinifera]
           gi|297740066|emb|CBI30248.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  201 bits (512), Expect = 6e-50
 Identities = 95/114 (83%), Positives = 103/114 (90%)
 Frame = -3

Query: 344 ILTFGSTSKKRPDNLVIGRTYDHHIYDLVEVGVENFKSMQSFSYDKKLAPLIGSKPFFAF 165
           I  FGS SKKRPDNLVIGRTYDHHIYDLVEVGVENFKSM+SF+YDKKL+P +GSKPF AF
Sbjct: 89  IFVFGSHSKKRPDNLVIGRTYDHHIYDLVEVGVENFKSMESFTYDKKLSPKVGSKPFIAF 148

Query: 164 IGEGFENVEELKHMKEVLLDLFHGEVVTNLNLAGLDRVYVCTAVSPNRVFFTHC 3
           IGEGFE+V+ELKH+KEVLLDL  GEVV NLNLAGLD  Y+CTAVS NRVFFTHC
Sbjct: 149 IGEGFESVDELKHLKEVLLDLLRGEVVENLNLAGLDHAYICTAVSSNRVFFTHC 202


>gb|AFC90090.1| brix domain-containing protein [Nicotiana benthamiana]
          Length = 321

 Score =  199 bits (505), Expect = 4e-49
 Identities = 93/114 (81%), Positives = 102/114 (89%)
 Frame = -3

Query: 344 ILTFGSTSKKRPDNLVIGRTYDHHIYDLVEVGVENFKSMQSFSYDKKLAPLIGSKPFFAF 165
           +  +GS SKKRP+NLVIGRTYDHH+YDLVEVGVE FKSM+SF YDK LAP IGSKPFF F
Sbjct: 95  LFVYGSHSKKRPNNLVIGRTYDHHVYDLVEVGVEEFKSMKSFKYDKNLAPKIGSKPFFTF 154

Query: 164 IGEGFENVEELKHMKEVLLDLFHGEVVTNLNLAGLDRVYVCTAVSPNRVFFTHC 3
           IGEGFE+VEELKH+KEVLLDLFHGEVVTNLNLAGLD VY+CT VSP +VF THC
Sbjct: 155 IGEGFESVEELKHLKEVLLDLFHGEVVTNLNLAGLDCVYLCTVVSPKKVFLTHC 208


>ref|XP_003535300.1| PREDICTED: ribosome production factor 2 homolog [Glycine max]
          Length = 314

 Score =  198 bits (503), Expect = 7e-49
 Identities = 95/114 (83%), Positives = 100/114 (87%)
 Frame = -3

Query: 344 ILTFGSTSKKRPDNLVIGRTYDHHIYDLVEVGVENFKSMQSFSYDKKLAPLIGSKPFFAF 165
           I  +GS SKKRPDNLVIGRTYDHHIYDLVEVGVENFK M+SFSYDKKLAP  GSKPF  F
Sbjct: 89  IFVYGSHSKKRPDNLVIGRTYDHHIYDLVEVGVENFKPMESFSYDKKLAPKEGSKPFIVF 148

Query: 164 IGEGFENVEELKHMKEVLLDLFHGEVVTNLNLAGLDRVYVCTAVSPNRVFFTHC 3
           IGEGFE VEELKH+KEVLLDL  GEVV NLNLAG+DR YVC A+SPNRVFFTHC
Sbjct: 149 IGEGFEAVEELKHLKEVLLDLLRGEVVENLNLAGVDRAYVCAALSPNRVFFTHC 202


>ref|XP_002528588.1| brix domain containing protein, putative [Ricinus communis]
           gi|223531984|gb|EEF33796.1| brix domain containing
           protein, putative [Ricinus communis]
          Length = 315

 Score =  197 bits (500), Expect = 2e-48
 Identities = 92/114 (80%), Positives = 99/114 (86%)
 Frame = -3

Query: 344 ILTFGSTSKKRPDNLVIGRTYDHHIYDLVEVGVENFKSMQSFSYDKKLAPLIGSKPFFAF 165
           I  +GSTSKKRPDNLVIGRTYDHHIYDLVEVG+ENFKSM SF YDKK AP +GSKPF AF
Sbjct: 89  IFVYGSTSKKRPDNLVIGRTYDHHIYDLVEVGIENFKSMSSFKYDKKAAPHVGSKPFIAF 148

Query: 164 IGEGFENVEELKHMKEVLLDLFHGEVVTNLNLAGLDRVYVCTAVSPNRVFFTHC 3
           +GEGFE+V+ELKH+KEVLLDL  GE V NLNLAGLDR YVCTA S NRVF THC
Sbjct: 149 VGEGFESVDELKHLKEVLLDLLRGEAVENLNLAGLDRAYVCTATSSNRVFLTHC 202


>ref|XP_003542560.1| PREDICTED: ribosome production factor 2 homolog [Glycine max]
          Length = 314

 Score =  194 bits (493), Expect = 1e-47
 Identities = 92/114 (80%), Positives = 100/114 (87%)
 Frame = -3

Query: 344 ILTFGSTSKKRPDNLVIGRTYDHHIYDLVEVGVENFKSMQSFSYDKKLAPLIGSKPFFAF 165
           +  +GS SKKRPDNLVIGRTYDHHI+DLVEVGVENFK M+SFSY+KKLAP  GSKPF  F
Sbjct: 89  VFVYGSHSKKRPDNLVIGRTYDHHIFDLVEVGVENFKPMESFSYNKKLAPKEGSKPFIVF 148

Query: 164 IGEGFENVEELKHMKEVLLDLFHGEVVTNLNLAGLDRVYVCTAVSPNRVFFTHC 3
           IGEGFE VEELKH+KEVLLDL  GEVV NLNLAG+DR YVC A+SPNRVFFTHC
Sbjct: 149 IGEGFEAVEELKHLKEVLLDLLRGEVVENLNLAGVDRAYVCAALSPNRVFFTHC 202


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