BLASTX nr result

ID: Panax21_contig00005001 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00005001
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003522759.1| PREDICTED: WD and tetratricopeptide repeats ...   457   e-126
ref|XP_003526538.1| PREDICTED: WD and tetratricopeptide repeats ...   456   e-126
emb|CBI19235.3| unnamed protein product [Vitis vinifera]              453   e-125
ref|XP_002514012.1| WD and tetratricopeptide repeat protein, put...   447   e-123
ref|XP_002306549.1| predicted protein [Populus trichocarpa] gi|2...   442   e-122

>ref|XP_003522759.1| PREDICTED: WD and tetratricopeptide repeats protein 1-like [Glycine
           max]
          Length = 762

 Score =  457 bits (1175), Expect = e-126
 Identities = 223/316 (70%), Positives = 250/316 (79%), Gaps = 4/316 (1%)
 Frame = +2

Query: 5   GCVNAVAWNXXXXXXXXXXXXTRINIWSYSGHKLLHSVETGHSSNIFCTKFVPETSDELV 184
           GCVNAVAWN             RINIWSYSG KLLHS++TGH++NIFCTKF+PETSDELV
Sbjct: 51  GCVNAVAWNSKGSILISGSDDLRINIWSYSGWKLLHSIDTGHTANIFCTKFIPETSDELV 110

Query: 185 VSGAGDAEVRLFHLSRLSGRGLATS----PSALFQCHTRRVKKLAVEVGNPNMVWSASED 352
            SGAGDA VRLF+LSRLSG G + +    PSA +QCHTRRVKKLAVE GNPN+VWSASED
Sbjct: 111 ASGAGDAGVRLFNLSRLSGSGFSDNAIIAPSAHYQCHTRRVKKLAVENGNPNVVWSASED 170

Query: 353 GTLRQHDLREGASCPPARSSHQECHNILLDLRSGAKKSLSDPPKQTLVLKSCDISSTRPH 532
           GTLRQHD REG SCPPA SSHQEC NILLDLRSG+K+SL+DPPKQ L LKSCDISSTRPH
Sbjct: 171 GTLRQHDFREGTSCPPAGSSHQECRNILLDLRSGSKRSLADPPKQVLALKSCDISSTRPH 230

Query: 533 LLLVGGSDAFARLYDRRMXXXXXXXXXXXXXXXCVNYFCPIHLSDRGRSSLHLTHVVFSP 712
           LLLVGGSDAFARLYDRRM               CVNYFCP+HLSD G  SLHLTHV FSP
Sbjct: 231 LLLVGGSDAFARLYDRRMLPPLSSCWKRMSPPPCVNYFCPMHLSDHGHPSLHLTHVTFSP 290

Query: 713 DGEEVLLSYSGDHVYLMDINPVRGSAMRYTSGDALKLMSFNPILNGVELKLSVSRVFPNG 892
           DG EVLLSYSG+HVYLM++N    + M+YTSGD  KLM+++P +NG E++  VS VFPNG
Sbjct: 291 DGHEVLLSYSGEHVYLMNVNHAGVNEMQYTSGDNSKLMTYSPTINGTEMQPCVSNVFPNG 350

Query: 893 FPIKSNFVSRLDKCRK 940
           FPIK N  ++LDKCRK
Sbjct: 351 FPIKKNIAAKLDKCRK 366


>ref|XP_003526538.1| PREDICTED: WD and tetratricopeptide repeats protein 1-like [Glycine
           max]
          Length = 762

 Score =  456 bits (1173), Expect = e-126
 Identities = 222/316 (70%), Positives = 250/316 (79%), Gaps = 4/316 (1%)
 Frame = +2

Query: 5   GCVNAVAWNXXXXXXXXXXXXTRINIWSYSGHKLLHSVETGHSSNIFCTKFVPETSDELV 184
           GCVNAVAWN             RINIWSYSG KLLHS++TGH++NIFCTKF+PETSDELV
Sbjct: 51  GCVNAVAWNSKGSLLISGSDDQRINIWSYSGWKLLHSIDTGHTANIFCTKFIPETSDELV 110

Query: 185 VSGAGDAEVRLFHLSRLSGRGLATS----PSALFQCHTRRVKKLAVEVGNPNMVWSASED 352
            SGAGDAEVRLF+LSRL+G G + +    PSA +QCHTRRVKKLAVE GNPN+VWSASED
Sbjct: 111 ASGAGDAEVRLFNLSRLNGSGFSDNAIIAPSAYYQCHTRRVKKLAVENGNPNVVWSASED 170

Query: 353 GTLRQHDLREGASCPPARSSHQECHNILLDLRSGAKKSLSDPPKQTLVLKSCDISSTRPH 532
           GTLRQHD REG SCPPA SSHQEC NILLDLRSG+K+SL+DPPKQ L LKSCDISST+PH
Sbjct: 171 GTLRQHDFREGTSCPPAGSSHQECRNILLDLRSGSKRSLADPPKQVLALKSCDISSTKPH 230

Query: 533 LLLVGGSDAFARLYDRRMXXXXXXXXXXXXXXXCVNYFCPIHLSDRGRSSLHLTHVVFSP 712
           LLLVGGSDAFARLYDRRM               CVNYFCP+HLSDRG  SLHLTHV FSP
Sbjct: 231 LLLVGGSDAFARLYDRRMLPPLSSCQKRMSPPPCVNYFCPMHLSDRGHPSLHLTHVTFSP 290

Query: 713 DGEEVLLSYSGDHVYLMDINPVRGSAMRYTSGDALKLMSFNPILNGVELKLSVSRVFPNG 892
           DG EVLLSYSG+HVYLM++N      M+YTSGD  KLM+++P +NG E++  VS VFPN 
Sbjct: 291 DGHEVLLSYSGEHVYLMNVNHAGVKEMQYTSGDESKLMTYSPTINGSEMQPCVSNVFPNR 350

Query: 893 FPIKSNFVSRLDKCRK 940
           FPIK N  ++LDKCRK
Sbjct: 351 FPIKKNIAAKLDKCRK 366


>emb|CBI19235.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  453 bits (1165), Expect = e-125
 Identities = 225/316 (71%), Positives = 247/316 (78%), Gaps = 3/316 (0%)
 Frame = +2

Query: 2   KGCVNAVAWNXXXXXXXXXXXXTRINIWSYSGHKLLHSVETGHSSNIFCTKFVPETSDEL 181
           +GCVN VAWN            TRINIW+Y   KLLH +ETGHS+NIFC KF+PETSDEL
Sbjct: 50  QGCVNTVAWNSRGSLLISGSDDTRINIWNYPSRKLLHCIETGHSANIFCAKFIPETSDEL 109

Query: 182 VVSGAGDAEVRLFHLSRLSGRGL---ATSPSALFQCHTRRVKKLAVEVGNPNMVWSASED 352
           V SGAGDAEVRLFHLSRLSGRG    A +PSALFQCHTRRVKKLAVEVGNPN+VWSASED
Sbjct: 110 VASGAGDAEVRLFHLSRLSGRGPDENAITPSALFQCHTRRVKKLAVEVGNPNVVWSASED 169

Query: 353 GTLRQHDLREGASCPPARSSHQECHNILLDLRSGAKKSLSDPPKQTLVLKSCDISSTRPH 532
           GTLRQHD REGASCPPA SSHQEC N+LLDLR GAKKSL+DPPKQ L LKSCDISSTRPH
Sbjct: 170 GTLRQHDFREGASCPPAGSSHQECRNVLLDLRCGAKKSLADPPKQCLSLKSCDISSTRPH 229

Query: 533 LLLVGGSDAFARLYDRRMXXXXXXXXXXXXXXXCVNYFCPIHLSDRGRSSLHLTHVVFSP 712
           LLLVGGSDAFARLYDRRM               CVNYFCP+HLSD GRSSLHLTHV FSP
Sbjct: 230 LLLVGGSDAFARLYDRRMLPPLTSCGKTMTPPPCVNYFCPMHLSDHGRSSLHLTHVTFSP 289

Query: 713 DGEEVLLSYSGDHVYLMDINPVRGSAMRYTSGDALKLMSFNPILNGVELKLSVSRVFPNG 892
           +GEEVL+SYS +HVYLMD+N   GS + Y  GDALKLM+ +PIL+G+     VS  F   
Sbjct: 290 NGEEVLISYSAEHVYLMDVNHACGSTVCYAPGDALKLMNPSPILDGIGFGSPVSDAFTYD 349

Query: 893 FPIKSNFVSRLDKCRK 940
           F +KSN  ++LDKCRK
Sbjct: 350 FSMKSNIAAKLDKCRK 365


>ref|XP_002514012.1| WD and tetratricopeptide repeat protein, putative [Ricinus
           communis] gi|223547098|gb|EEF48595.1| WD and
           tetratricopeptide repeat protein, putative [Ricinus
           communis]
          Length = 761

 Score =  447 bits (1150), Expect = e-123
 Identities = 221/316 (69%), Positives = 251/316 (79%), Gaps = 3/316 (0%)
 Frame = +2

Query: 2   KGCVNAVAWNXXXXXXXXXXXXTRINIWSYSGHKLLHSVETGHSSNIFCTKFVPETSDEL 181
           +GCVN++AWN            TR+NIWSYSG KLLHS++TGHS+NIFCTKF+PETSDEL
Sbjct: 50  QGCVNSIAWNSTGSLLVSGSDDTRMNIWSYSGRKLLHSIDTGHSANIFCTKFIPETSDEL 109

Query: 182 VVSGAGDAEVRLFHLSRLSGRGL---ATSPSALFQCHTRRVKKLAVEVGNPNMVWSASED 352
           VVSGAGDAEVRLF+LSRLSGRG    A +P AL+QCHT+RVKKLAVEVGNPN+VWSASED
Sbjct: 110 VVSGAGDAEVRLFNLSRLSGRGPDDNAIAPLALYQCHTKRVKKLAVEVGNPNVVWSASED 169

Query: 353 GTLRQHDLREGASCPPARSSHQECHNILLDLRSGAKKSLSDPPKQTLVLKSCDISSTRPH 532
           GTLRQHDLRE +SCPPA SS QEC N+LLDLR GAK+SL DPPKQTL LKSCDIS+ RPH
Sbjct: 170 GTLRQHDLREDSSCPPAGSSPQECRNVLLDLRCGAKRSLVDPPKQTLALKSCDISARRPH 229

Query: 533 LLLVGGSDAFARLYDRRMXXXXXXXXXXXXXXXCVNYFCPIHLSDRGRSSLHLTHVVFSP 712
           LLLVGGSDAFARLYDRRM               CVNY CP+HLS+RGRS LHLTHV FSP
Sbjct: 230 LLLVGGSDAFARLYDRRMLPPLTSCRKRMPPPPCVNYICPMHLSERGRSGLHLTHVTFSP 289

Query: 713 DGEEVLLSYSGDHVYLMDINPVRGSAMRYTSGDALKLMSFNPILNGVELKLSVSRVFPNG 892
            G+EVLLSYSG+HVYLM++N   GS+M+YT+GDA KLM+F PILNG+EL+   S +  NG
Sbjct: 290 SGDEVLLSYSGEHVYLMNVNHAGGSSMQYTTGDASKLMTFAPILNGLELQPPPSDISKNG 349

Query: 893 FPIKSNFVSRLDKCRK 940
              KS   S L KCRK
Sbjct: 350 LRFKSYVASTLQKCRK 365


>ref|XP_002306549.1| predicted protein [Populus trichocarpa] gi|222855998|gb|EEE93545.1|
           predicted protein [Populus trichocarpa]
          Length = 756

 Score =  442 bits (1138), Expect = e-122
 Identities = 220/316 (69%), Positives = 256/316 (81%), Gaps = 3/316 (0%)
 Frame = +2

Query: 2   KGCVNAVAWNXXXXXXXXXXXXTRINIWSYSGHKLLHSVETGHSSNIFCTKFVPETSDEL 181
           +GCVN++AWN            TR+NIW+Y+G KLLHS++TGHS+NIFCTKFVPETSDEL
Sbjct: 47  QGCVNSIAWNSKGSLLISGSDDTRMNIWNYAGRKLLHSIDTGHSANIFCTKFVPETSDEL 106

Query: 182 VVSGAGDAEVRLFHLSRLSGRGL---ATSPSALFQCHTRRVKKLAVEVGNPNMVWSASED 352
           VV+GAGDAEVRLF+LSRLSGR     + +PSAL+QCHTRRVKKLAVEVGNPN+VWSASED
Sbjct: 107 VVAGAGDAEVRLFNLSRLSGRSPDDNSIAPSALYQCHTRRVKKLAVEVGNPNVVWSASED 166

Query: 353 GTLRQHDLREGASCPPARSSHQECHNILLDLRSGAKKSLSDPPKQTLVLKSCDISSTRPH 532
           GTLRQHD REGASCPPA SSH EC NILLDLRSGAK+SL+DPPKQTL L+SCDIS++RPH
Sbjct: 167 GTLRQHDFREGASCPPAGSSH-ECRNILLDLRSGAKRSLADPPKQTLALRSCDISTSRPH 225

Query: 533 LLLVGGSDAFARLYDRRMXXXXXXXXXXXXXXXCVNYFCPIHLSDRGRSSLHLTHVVFSP 712
           LLLVGGSDAFARLYDRRM               CVNYFCP+HLS+RGRSSLHLTHV FSP
Sbjct: 226 LLLVGGSDAFARLYDRRMLPPLTSCRKRMSPPPCVNYFCPMHLSERGRSSLHLTHVTFSP 285

Query: 713 DGEEVLLSYSGDHVYLMDINPVRGSAMRYTSGDALKLMSFNPILNGVELKLSVSRVFPNG 892
           +G+EVLLSYSG+HVYLM++N   G+A+RYT+GD  KLM+F P LNG+EL+   S VF   
Sbjct: 286 NGDEVLLSYSGEHVYLMNVNHSGGTAVRYTTGDTSKLMTFAPTLNGLELQPLPSCVFKRQ 345

Query: 893 FPIKSNFVSRLDKCRK 940
              K+N  S L+KCR+
Sbjct: 346 SHSKTNGSSMLEKCRR 361


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