BLASTX nr result

ID: Panax21_contig00004995 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004995
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90599.1| photosystem I subunit III precursor (chloroplast)...   268   7e-70
gb|AAP03872.1| putative photosystem I subunit III precursor [Nic...   263   3e-68
ref|XP_002516419.1| Photosystem I reaction center subunit III, c...   253   2e-65
ref|XP_004150631.1| PREDICTED: photosystem I reaction center sub...   250   2e-64
ref|XP_004145485.1| PREDICTED: photosystem I reaction center sub...   250   2e-64

>gb|AFW90599.1| photosystem I subunit III precursor (chloroplast) [Solanum
           tuberosum]
          Length = 228

 Score =  268 bits (685), Expect = 7e-70
 Identities = 139/200 (69%), Positives = 147/200 (73%)
 Frame = +1

Query: 58  MALSIPTNLYKPISKPKLNSQFTSKPRLSTILCXXXXXXXXXXXXXDKEXXXXXXXXXXX 237
           M+L+IPTNL KPIS  K  SQFT+KPR S I+C               E           
Sbjct: 1   MSLTIPTNLSKPISTSKFGSQFTTKPRTSAIVCSSNQTPVSN----STEESSSSLKAFSA 56

Query: 238 XXXXXXXXXXXXXXXXXXDISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALAI 417
                             DISGLTPCKDSKQFAKREKQQIKKLESSLKLY+P+SAPALAI
Sbjct: 57  ALALSSILLSAPVLPASADISGLTPCKDSKQFAKREKQQIKKLESSLKLYSPDSAPALAI 116

Query: 418 NATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 597
           NATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGR
Sbjct: 117 NATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 176

Query: 598 SYLIAIRDEKKPTEKEIIID 657
           SYLIA+RD+KKPT KEIIID
Sbjct: 177 SYLIAVRDDKKPTMKEIIID 196


>gb|AAP03872.1| putative photosystem I subunit III precursor [Nicotiana tabacum]
          Length = 222

 Score =  263 bits (671), Expect = 3e-68
 Identities = 138/200 (69%), Positives = 147/200 (73%)
 Frame = +1

Query: 58  MALSIPTNLYKPISKPKLNSQFTSKPRLSTILCXXXXXXXXXXXXXDKEXXXXXXXXXXX 237
           M+L+IPTNL KPIS   LNSQFT KPR +TI+C               E           
Sbjct: 1   MSLTIPTNLSKPIST--LNSQFTKKPRFATIVCSSSSSCD--------EQSSCNLKAFSA 50

Query: 238 XXXXXXXXXXXXXXXXXXDISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALAI 417
                             DISGLTPCK+SKQFAKREKQQIKKLESSLKLYAP+SAPALAI
Sbjct: 51  ALALSSVLLSVPVLPASADISGLTPCKESKQFAKREKQQIKKLESSLKLYAPDSAPALAI 110

Query: 418 NATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 597
            AT+EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGR
Sbjct: 111 QATVEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 170

Query: 598 SYLIAIRDEKKPTEKEIIID 657
           SYLIA+RD+KKPT KEIIID
Sbjct: 171 SYLIAVRDDKKPTMKEIIID 190


>ref|XP_002516419.1| Photosystem I reaction center subunit III, chloroplast precursor,
           putative [Ricinus communis] gi|223544454|gb|EEF45974.1|
           Photosystem I reaction center subunit III, chloroplast
           precursor, putative [Ricinus communis]
          Length = 225

 Score =  253 bits (647), Expect = 2e-65
 Identities = 135/200 (67%), Positives = 142/200 (71%)
 Frame = +1

Query: 58  MALSIPTNLYKPISKPKLNSQFTSKPRLSTILCXXXXXXXXXXXXXDKEXXXXXXXXXXX 237
           M+L+IP+NL KP+ KPKL S  T  PR S I+C              K            
Sbjct: 1   MSLTIPSNLSKPMLKPKLGSSLT--PRSSMIVCSASQTPSTQEKDSSKSPLQAFSAALAL 58

Query: 238 XXXXXXXXXXXXXXXXXXDISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALAI 417
                             DISGLTPCKDSKQFAKREKQQIKKLESSLKLYAP+SAPALAI
Sbjct: 59  SSILLSAPLPAVA-----DISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAI 113

Query: 418 NATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 597
            AT+EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGR
Sbjct: 114 KATVEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 173

Query: 598 SYLIAIRDEKKPTEKEIIID 657
           SYLIAIR EKKP  KEIIID
Sbjct: 174 SYLIAIRGEKKPAMKEIIID 193


>ref|XP_004150631.1| PREDICTED: photosystem I reaction center subunit III,
           chloroplastic-like [Cucumis sativus]
           gi|449487680|ref|XP_004157747.1| PREDICTED: photosystem
           I reaction center subunit III, chloroplastic-like
           [Cucumis sativus]
          Length = 224

 Score =  250 bits (638), Expect = 2e-64
 Identities = 133/201 (66%), Positives = 145/201 (72%), Gaps = 1/201 (0%)
 Frame = +1

Query: 58  MALSIPTNLYKPISKPKLNSQFTSKPR-LSTILCXXXXXXXXXXXXXDKEXXXXXXXXXX 234
           M+L+IPTNL KP+ KPK +S    KP+  S+ILC             ++           
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQ---------NQNQNTSSSLQAF 51

Query: 235 XXXXXXXXXXXXXXXXXXXDISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALA 414
                              DISGLTPCK+SKQFAKREKQQIKKLESSLK YAP+SAPALA
Sbjct: 52  SAALALSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALA 111

Query: 415 INATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVG 594
           I ATIEKTKRRF  YGKQGLLCG+DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVG
Sbjct: 112 IKATIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVG 171

Query: 595 RSYLIAIRDEKKPTEKEIIID 657
           RSYLIAIRDEKKPT+KEIIID
Sbjct: 172 RSYLIAIRDEKKPTQKEIIID 192


>ref|XP_004145485.1| PREDICTED: photosystem I reaction center subunit III,
           chloroplastic-like [Cucumis sativus]
          Length = 204

 Score =  250 bits (638), Expect = 2e-64
 Identities = 133/201 (66%), Positives = 145/201 (72%), Gaps = 1/201 (0%)
 Frame = +1

Query: 58  MALSIPTNLYKPISKPKLNSQFTSKPR-LSTILCXXXXXXXXXXXXXDKEXXXXXXXXXX 234
           M+L+IPTNL KP+ KPK +S    KP+  S+ILC             ++           
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQ---------NQNQNTSSSLQAF 51

Query: 235 XXXXXXXXXXXXXXXXXXXDISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPESAPALA 414
                              DISGLTPCK+SKQFAKREKQQIKKLESSLK YAP+SAPALA
Sbjct: 52  SAALALSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALA 111

Query: 415 INATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVG 594
           I ATIEKTKRRF  YGKQGLLCG+DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVG
Sbjct: 112 IKATIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVG 171

Query: 595 RSYLIAIRDEKKPTEKEIIID 657
           RSYLIAIRDEKKPT+KEIIID
Sbjct: 172 RSYLIAIRDEKKPTQKEIIID 192


Top