BLASTX nr result

ID: Panax21_contig00004994 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004994
         (655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90599.1| photosystem I subunit III precursor (chloroplast)...   265   4e-69
gb|AAP03872.1| putative photosystem I subunit III precursor [Nic...   258   5e-67
ref|XP_004150631.1| PREDICTED: photosystem I reaction center sub...   254   1e-65
ref|XP_004145485.1| PREDICTED: photosystem I reaction center sub...   254   1e-65
ref|XP_002516419.1| Photosystem I reaction center subunit III, c...   250   1e-64

>gb|AFW90599.1| photosystem I subunit III precursor (chloroplast) [Solanum
           tuberosum]
          Length = 228

 Score =  265 bits (678), Expect = 4e-69
 Identities = 139/200 (69%), Positives = 145/200 (72%)
 Frame = +3

Query: 54  MVLSIPTNLYKPISKPKLNSQFTSKPRPSTILYXXXXXXXXXXXXXDQEXXXXXXXXXXX 233
           M L+IPTNL KPIS  K  SQFT+KPR S I+                E           
Sbjct: 1   MSLTIPTNLSKPISTSKFGSQFTTKPRTSAIV----CSSNQTPVSNSTEESSSSLKAFSA 56

Query: 234 XXXXXXXXXXXXXXXXXXDISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAI 413
                             DISGLTPCKDSKQFAKREKQQIKKLESSLKLY+PDSAPALAI
Sbjct: 57  ALALSSILLSAPVLPASADISGLTPCKDSKQFAKREKQQIKKLESSLKLYSPDSAPALAI 116

Query: 414 NATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 593
           NATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGR
Sbjct: 117 NATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 176

Query: 594 SYLIAIRDEKKPTQKEIIID 653
           SYLIA+RD+KKPT KEIIID
Sbjct: 177 SYLIAVRDDKKPTMKEIIID 196


>gb|AAP03872.1| putative photosystem I subunit III precursor [Nicotiana tabacum]
          Length = 222

 Score =  258 bits (660), Expect = 5e-67
 Identities = 138/200 (69%), Positives = 145/200 (72%)
 Frame = +3

Query: 54  MVLSIPTNLYKPISKPKLNSQFTSKPRPSTILYXXXXXXXXXXXXXDQEXXXXXXXXXXX 233
           M L+IPTNL KPIS   LNSQFT KPR +TI+                E           
Sbjct: 1   MSLTIPTNLSKPIST--LNSQFTKKPRFATIVCSSSSSC--------DEQSSCNLKAFSA 50

Query: 234 XXXXXXXXXXXXXXXXXXDISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAI 413
                             DISGLTPCK+SKQFAKREKQQIKKLESSLKLYAPDSAPALAI
Sbjct: 51  ALALSSVLLSVPVLPASADISGLTPCKESKQFAKREKQQIKKLESSLKLYAPDSAPALAI 110

Query: 414 NATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 593
            AT+EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGR
Sbjct: 111 QATVEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 170

Query: 594 SYLIAIRDEKKPTQKEIIID 653
           SYLIA+RD+KKPT KEIIID
Sbjct: 171 SYLIAVRDDKKPTMKEIIID 190


>ref|XP_004150631.1| PREDICTED: photosystem I reaction center subunit III,
           chloroplastic-like [Cucumis sativus]
           gi|449487680|ref|XP_004157747.1| PREDICTED: photosystem
           I reaction center subunit III, chloroplastic-like
           [Cucumis sativus]
          Length = 224

 Score =  254 bits (649), Expect = 1e-65
 Identities = 134/200 (67%), Positives = 143/200 (71%)
 Frame = +3

Query: 54  MVLSIPTNLYKPISKPKLNSQFTSKPRPSTILYXXXXXXXXXXXXXDQEXXXXXXXXXXX 233
           M L+IPTNL KP+ KPK +S    KP+PS+ +              +Q            
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQ--------NQNQNTSSSLQAFS 52

Query: 234 XXXXXXXXXXXXXXXXXXDISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAI 413
                             DISGLTPCK+SKQFAKREKQQIKKLESSLK YAPDSAPALAI
Sbjct: 53  AALALSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAI 112

Query: 414 NATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 593
            ATIEKTKRRF  YGKQGLLCG+DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR
Sbjct: 113 KATIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 172

Query: 594 SYLIAIRDEKKPTQKEIIID 653
           SYLIAIRDEKKPTQKEIIID
Sbjct: 173 SYLIAIRDEKKPTQKEIIID 192


>ref|XP_004145485.1| PREDICTED: photosystem I reaction center subunit III,
           chloroplastic-like [Cucumis sativus]
          Length = 204

 Score =  254 bits (649), Expect = 1e-65
 Identities = 134/200 (67%), Positives = 143/200 (71%)
 Frame = +3

Query: 54  MVLSIPTNLYKPISKPKLNSQFTSKPRPSTILYXXXXXXXXXXXXXDQEXXXXXXXXXXX 233
           M L+IPTNL KP+ KPK +S    KP+PS+ +              +Q            
Sbjct: 1   MSLTIPTNLSKPLLKPKFSSPLALKPKPSSSILCSASQ--------NQNQNTSSSLQAFS 52

Query: 234 XXXXXXXXXXXXXXXXXXDISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAI 413
                             DISGLTPCK+SKQFAKREKQQIKKLESSLK YAPDSAPALAI
Sbjct: 53  AALALSSILLSAPLPAVADISGLTPCKESKQFAKREKQQIKKLESSLKNYAPDSAPALAI 112

Query: 414 NATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 593
            ATIEKTKRRF  YGKQGLLCG+DGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR
Sbjct: 113 KATIEKTKRRFAFYGKQGLLCGADGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 172

Query: 594 SYLIAIRDEKKPTQKEIIID 653
           SYLIAIRDEKKPTQKEIIID
Sbjct: 173 SYLIAIRDEKKPTQKEIIID 192


>ref|XP_002516419.1| Photosystem I reaction center subunit III, chloroplast precursor,
           putative [Ricinus communis] gi|223544454|gb|EEF45974.1|
           Photosystem I reaction center subunit III, chloroplast
           precursor, putative [Ricinus communis]
          Length = 225

 Score =  250 bits (639), Expect = 1e-64
 Identities = 134/200 (67%), Positives = 141/200 (70%)
 Frame = +3

Query: 54  MVLSIPTNLYKPISKPKLNSQFTSKPRPSTILYXXXXXXXXXXXXXDQEXXXXXXXXXXX 233
           M L+IP+NL KP+ KPKL S  T  PR S I+               ++           
Sbjct: 1   MSLTIPSNLSKPMLKPKLGSSLT--PRSSMIV-----CSASQTPSTQEKDSSKSPLQAFS 53

Query: 234 XXXXXXXXXXXXXXXXXXDISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAI 413
                             DISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAI
Sbjct: 54  AALALSSILLSAPLPAVADISGLTPCKDSKQFAKREKQQIKKLESSLKLYAPDSAPALAI 113

Query: 414 NATIEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGFLFLYIAGWIGWVGR 593
            AT+EKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPG LFLYIAGWIGWVGR
Sbjct: 114 KATVEKTKRRFDNYGKQGLLCGSDGLPHLIVSGDQRHWGEFITPGILFLYIAGWIGWVGR 173

Query: 594 SYLIAIRDEKKPTQKEIIID 653
           SYLIAIR EKKP  KEIIID
Sbjct: 174 SYLIAIRGEKKPAMKEIIID 193


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