BLASTX nr result

ID: Panax21_contig00004990 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004990
         (1067 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communi...   209   7e-52
ref|XP_002303150.1| predicted protein [Populus trichocarpa] gi|2...   205   1e-50
ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|2...   205   1e-50
emb|CBI29756.3| unnamed protein product [Vitis vinifera]              192   1e-46
ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like...   192   1e-46

>ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
            gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative
            [Ricinus communis]
          Length = 1233

 Score =  209 bits (533), Expect = 7e-52
 Identities = 109/204 (53%), Positives = 154/204 (75%), Gaps = 4/204 (1%)
 Frame = +3

Query: 468  CSEICSDSPTVHSIQARSLQNRLQEKERVIRKTRR--S*TNYLRL--SSVSQKFLLVKKH 635
            C + C +   + ++  + +    ++  ++++ T +  S ++ L +   S++Q    VKK+
Sbjct: 859  CKKTCDNCSQIKALVEKDVTETAKQLVQLVKLTGQQFSSSHILEVYRGSLNQ---YVKKY 915

Query: 636  RHDSLSLYGAGKHLGKSEASRVWRHLVTEYFLEDDVKKSEVYGSVSSVLKVNETKAYNLC 815
            RH++LSL+GAGKHL K EASR+ RHLVT+ FL++DVKKS+VYGSVSS+LKVNE+KAYNLC
Sbjct: 916  RHETLSLHGAGKHLSKGEASRILRHLVTDDFLQEDVKKSDVYGSVSSILKVNESKAYNLC 975

Query: 816  TGDQTIKLRFPSSLKASNSGRYEATPAKGSLTSGKEISPLEDTSLQPRAEIDLDLSAKLY 995
            +G QTI LRFPS++KAS   +++ATPAKGSLTSGK+  P  D+  Q + E+DL LSA LY
Sbjct: 976  SGGQTIILRFPSTMKASKPSKFDATPAKGSLTSGKQSPPEVDSPAQAQPEVDLHLSAILY 1035

Query: 996  SSLRMLRTVLLKEAGKGVLPYHIF 1067
            S+LRMLRT+L+KEAG+GV+ YHIF
Sbjct: 1036 SALRMLRTLLVKEAGEGVMAYHIF 1059


>ref|XP_002303150.1| predicted protein [Populus trichocarpa] gi|222840582|gb|EEE78129.1|
            predicted protein [Populus trichocarpa]
          Length = 464

 Score =  205 bits (522), Expect = 1e-50
 Identities = 111/204 (54%), Positives = 146/204 (71%), Gaps = 4/204 (1%)
 Frame = +3

Query: 468  CSEICSDSPTVHSIQARSLQNRLQEKERVIRKTRR--S*TNYLRL--SSVSQKFLLVKKH 635
            C   C +   + ++  R +    ++   +++ T +  S ++ L +   S+SQ    VK+H
Sbjct: 128  CGNTCDNCSKIKTLVERDVTESAKQLVELVKLTGQHFSSSHILEVYRGSLSQ---FVKRH 184

Query: 636  RHDSLSLYGAGKHLGKSEASRVWRHLVTEYFLEDDVKKSEVYGSVSSVLKVNETKAYNLC 815
            RH++LSL+GAGKHL K EASR+ RHLV E FL +DVKKS+ YGSVSSVLKVNE+KA+ LC
Sbjct: 185  RHENLSLHGAGKHLAKGEASRILRHLVIEDFLAEDVKKSDFYGSVSSVLKVNESKAHKLC 244

Query: 816  TGDQTIKLRFPSSLKASNSGRYEATPAKGSLTSGKEISPLEDTSLQPRAEIDLDLSAKLY 995
            +G Q I LRFPSS+KAS  G+ EATPAKGSL SGK   P   +  QP++E+DL+LSAKL+
Sbjct: 245  SGGQRIVLRFPSSVKASKQGKSEATPAKGSLMSGKLSPPQAGSPAQPQSEVDLNLSAKLF 304

Query: 996  SSLRMLRTVLLKEAGKGVLPYHIF 1067
            S+LRMLRT LLKEAG GV+ YHIF
Sbjct: 305  SALRMLRTALLKEAGDGVMAYHIF 328


>ref|XP_002303149.1| predicted protein [Populus trichocarpa] gi|222840581|gb|EEE78128.1|
            predicted protein [Populus trichocarpa]
          Length = 1194

 Score =  205 bits (522), Expect = 1e-50
 Identities = 111/204 (54%), Positives = 146/204 (71%), Gaps = 4/204 (1%)
 Frame = +3

Query: 468  CSEICSDSPTVHSIQARSLQNRLQEKERVIRKTRR--S*TNYLRL--SSVSQKFLLVKKH 635
            C   C +   + ++  R +    ++   +++ T +  S ++ L +   S+SQ    VK+H
Sbjct: 858  CGNTCDNCSKIKTLVERDVTESAKQLVELVKLTGQHFSSSHILEVYRGSLSQ---FVKRH 914

Query: 636  RHDSLSLYGAGKHLGKSEASRVWRHLVTEYFLEDDVKKSEVYGSVSSVLKVNETKAYNLC 815
            RH++LSL+GAGKHL K EASR+ RHLV E FL +DVKKS+ YGSVSSVLKVNE+KA+ LC
Sbjct: 915  RHENLSLHGAGKHLAKGEASRILRHLVIEDFLAEDVKKSDFYGSVSSVLKVNESKAHKLC 974

Query: 816  TGDQTIKLRFPSSLKASNSGRYEATPAKGSLTSGKEISPLEDTSLQPRAEIDLDLSAKLY 995
            +G Q I LRFPSS+KAS  G+ EATPAKGSL SGK   P   +  QP++E+DL+LSAKL+
Sbjct: 975  SGGQRIVLRFPSSVKASKQGKSEATPAKGSLMSGKLSPPQAGSPAQPQSEVDLNLSAKLF 1034

Query: 996  SSLRMLRTVLLKEAGKGVLPYHIF 1067
            S+LRMLRT LLKEAG GV+ YHIF
Sbjct: 1035 SALRMLRTALLKEAGDGVMAYHIF 1058


>emb|CBI29756.3| unnamed protein product [Vitis vinifera]
          Length = 1235

 Score =  192 bits (488), Expect = 1e-46
 Identities = 109/204 (53%), Positives = 143/204 (70%), Gaps = 4/204 (1%)
 Frame = +3

Query: 468  CSEICSDSPTVHSIQARSLQNRLQEKERVIRKTRR--S*TNYLRL--SSVSQKFLLVKKH 635
            C + C +   + S   + +    ++   +++ TR   S ++ L +   S+SQ    VKKH
Sbjct: 836  CKKTCDNCLKIKSFVEKDVTEIAKQLVELVKLTREQFSSSHILEVYRGSLSQ---YVKKH 892

Query: 636  RHDSLSLYGAGKHLGKSEASRVWRHLVTEYFLEDDVKKSEVYGSVSSVLKVNETKAYNLC 815
            RH++L L+ AGKHL K EASR+ RHLVTE FL +DVKKS++YGSVSSVLKVNE+K Y L 
Sbjct: 893  RHETLGLHAAGKHLAKGEASRILRHLVTEDFLMEDVKKSDIYGSVSSVLKVNESKVYKLF 952

Query: 816  TGDQTIKLRFPSSLKASNSGRYEATPAKGSLTSGKEISPLEDTSLQPRAEIDLDLSAKLY 995
            +G Q I LRFPSS K+S    +EATPAKGSLTSGK +SP    +     E+DL+LSAKLY
Sbjct: 953  SGGQKIILRFPSSAKSSKLSNFEATPAKGSLTSGK-LSPPRIETPAHLPEVDLNLSAKLY 1011

Query: 996  SSLRMLRTVLLKEAGKGVLPYHIF 1067
            S+LR+LRTVL+KEAG+GV+ YHIF
Sbjct: 1012 SALRILRTVLVKEAGEGVMAYHIF 1035


>ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis vinifera]
          Length = 1224

 Score =  192 bits (488), Expect = 1e-46
 Identities = 109/204 (53%), Positives = 143/204 (70%), Gaps = 4/204 (1%)
 Frame = +3

Query: 468  CSEICSDSPTVHSIQARSLQNRLQEKERVIRKTRR--S*TNYLRL--SSVSQKFLLVKKH 635
            C + C +   + S   + +    ++   +++ TR   S ++ L +   S+SQ    VKKH
Sbjct: 825  CKKTCDNCLKIKSFVEKDVTEIAKQLVELVKLTREQFSSSHILEVYRGSLSQ---YVKKH 881

Query: 636  RHDSLSLYGAGKHLGKSEASRVWRHLVTEYFLEDDVKKSEVYGSVSSVLKVNETKAYNLC 815
            RH++L L+ AGKHL K EASR+ RHLVTE FL +DVKKS++YGSVSSVLKVNE+K Y L 
Sbjct: 882  RHETLGLHAAGKHLAKGEASRILRHLVTEDFLMEDVKKSDIYGSVSSVLKVNESKVYKLF 941

Query: 816  TGDQTIKLRFPSSLKASNSGRYEATPAKGSLTSGKEISPLEDTSLQPRAEIDLDLSAKLY 995
            +G Q I LRFPSS K+S    +EATPAKGSLTSGK +SP    +     E+DL+LSAKLY
Sbjct: 942  SGGQKIILRFPSSAKSSKLSNFEATPAKGSLTSGK-LSPPRIETPAHLPEVDLNLSAKLY 1000

Query: 996  SSLRMLRTVLLKEAGKGVLPYHIF 1067
            S+LR+LRTVL+KEAG+GV+ YHIF
Sbjct: 1001 SALRILRTVLVKEAGEGVMAYHIF 1024


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