BLASTX nr result

ID: Panax21_contig00004984 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004984
         (644 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFL48180.1| succinyl-CoA synthetase [Capsicum annuum] gi|3900...   404   e-111
ref|NP_001234574.1| succinyl-CoA ligase [ADP-forming] subunit al...   404   e-110
gb|ABK95068.1| unknown [Populus trichocarpa]                          403   e-110
ref|XP_004137529.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   403   e-110
ref|XP_002872045.1| hypothetical protein ARALYDRAFT_489184 [Arab...   403   e-110

>gb|AFL48180.1| succinyl-CoA synthetase [Capsicum annuum]
           gi|390098816|gb|AFL48181.1| succinyl-CoA synthetase
           [Capsicum annuum]
          Length = 326

 Score =  404 bits (1039), Expect = e-111
 Identities = 194/213 (91%), Positives = 206/213 (96%)
 Frame = -1

Query: 641 SQSRCFGTAPPPPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH 462
           ++ R FG++ PPPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH
Sbjct: 19  NEYRYFGSSAPPPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEH 78

Query: 461 LGLPVFNSVAEAKAETKANASVIYVPPSFAAAAIMEGLEAELDLVVCITEGIPQHDMVRV 282
           LGLPVFN+VAEAKAETKANASV+YVPP FAAAAIME +EAELDLVVCITEGIPQHDMVRV
Sbjct: 79  LGLPVFNTVAEAKAETKANASVVYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRV 138

Query: 281 KAALLQQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTT 102
           KAAL +QS+TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTT 
Sbjct: 139 KAALKKQSRTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTA 198

Query: 101 VGLGQSTCVGIGGDPFNGTNFVDCMKKFIADPQ 3
           VGLGQSTCVGIGGDPFNGTNFVDC+++FIADPQ
Sbjct: 199 VGLGQSTCVGIGGDPFNGTNFVDCLERFIADPQ 231


>ref|NP_001234574.1| succinyl-CoA ligase [ADP-forming] subunit alpha-2, mitochondrial
           [Solanum lycopersicum]
           gi|75120763|sp|Q6DQL1.1|SUCA2_SOLLC RecName:
           Full=Succinyl-CoA ligase [ADP-forming] subunit alpha-2,
           mitochondrial; Short=SlSCoALalpha2; Flags: Precursor
           gi|49617539|gb|AAT67464.1| succinyl-CoA ligase alpha 2
           subunit [Solanum lycopersicum]
          Length = 337

 Score =  404 bits (1037), Expect = e-110
 Identities = 194/212 (91%), Positives = 203/212 (95%)
 Frame = -1

Query: 638 QSRCFGTAPPPPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHL 459
           Q R FG+ PPPPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHL
Sbjct: 31  QYRYFGSPPPPPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTEHL 90

Query: 458 GLPVFNSVAEAKAETKANASVIYVPPSFAAAAIMEGLEAELDLVVCITEGIPQHDMVRVK 279
           GLPVFN+VAEAK ETKANASV+YVPP FAAAAIME +EAELDLVVCITEGIPQHDMVRVK
Sbjct: 91  GLPVFNTVAEAKVETKANASVVYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVRVK 150

Query: 278 AALLQQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTTV 99
           AAL +Q +TRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTT V
Sbjct: 151 AALKKQLRTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTTAV 210

Query: 98  GLGQSTCVGIGGDPFNGTNFVDCMKKFIADPQ 3
           GLGQSTCVGIGGDPFNGTNFVDC+++FIADPQ
Sbjct: 211 GLGQSTCVGIGGDPFNGTNFVDCLERFIADPQ 242


>gb|ABK95068.1| unknown [Populus trichocarpa]
          Length = 331

 Score =  403 bits (1036), Expect = e-110
 Identities = 196/214 (91%), Positives = 206/214 (96%), Gaps = 1/214 (0%)
 Frame = -1

Query: 641 SQSRCFGTAPPPP-AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE 465
           SQSR F  APPPP AVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE
Sbjct: 22  SQSRSFTAAPPPPPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE 81

Query: 464 HLGLPVFNSVAEAKAETKANASVIYVPPSFAAAAIMEGLEAELDLVVCITEGIPQHDMVR 285
           HLGLPVFNSV+EAKAETKANASVIYVPP FAAAAI+E +EAELDLVVCITEGIPQHDMVR
Sbjct: 82  HLGLPVFNSVSEAKAETKANASVIYVPPPFAAAAILEAVEAELDLVVCITEGIPQHDMVR 141

Query: 284 VKAALLQQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTT 105
           VKAA+ +Q+KTRLIGPNCPGIIKPGECKIGIMPGYIHKPGR+GIVSRSGTLTYEAVFQTT
Sbjct: 142 VKAAIKKQTKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRVGIVSRSGTLTYEAVFQTT 201

Query: 104 TVGLGQSTCVGIGGDPFNGTNFVDCMKKFIADPQ 3
            VGLGQSTCVGIGGDPFNGTNFVDC++KF+ADPQ
Sbjct: 202 AVGLGQSTCVGIGGDPFNGTNFVDCVEKFLADPQ 235


>ref|XP_004137529.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit alpha-1,
           mitochondrial-like [Cucumis sativus]
          Length = 342

 Score =  403 bits (1035), Expect = e-110
 Identities = 198/214 (92%), Positives = 204/214 (95%), Gaps = 1/214 (0%)
 Frame = -1

Query: 641 SQSRCFGTAP-PPPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE 465
           SQ R +  AP PPPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE
Sbjct: 33  SQIRHYSAAPSPPPAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGTE 92

Query: 464 HLGLPVFNSVAEAKAETKANASVIYVPPSFAAAAIMEGLEAELDLVVCITEGIPQHDMVR 285
           HLGLPVFNSVAEAKAETKANASVIYVPP FAAAAIME +EAELDLVVCITEGIPQHDMVR
Sbjct: 93  HLGLPVFNSVAEAKAETKANASVIYVPPPFAAAAIMEAMEAELDLVVCITEGIPQHDMVR 152

Query: 284 VKAALLQQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTT 105
           VKAAL +QSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTT
Sbjct: 153 VKAALNKQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQTT 212

Query: 104 TVGLGQSTCVGIGGDPFNGTNFVDCMKKFIADPQ 3
            VGLGQSTCVGIGGDPFNGTNFVDC++KF+ DPQ
Sbjct: 213 AVGLGQSTCVGIGGDPFNGTNFVDCIEKFLVDPQ 246


>ref|XP_002872045.1| hypothetical protein ARALYDRAFT_489184 [Arabidopsis lyrata subsp.
           lyrata] gi|297317882|gb|EFH48304.1| hypothetical protein
           ARALYDRAFT_489184 [Arabidopsis lyrata subsp. lyrata]
          Length = 339

 Score =  403 bits (1035), Expect = e-110
 Identities = 197/215 (91%), Positives = 204/215 (94%), Gaps = 1/215 (0%)
 Frame = -1

Query: 644 ISQSRCFGTAPPPPA-VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVGGVTPKKGGT 468
           ++QSR FGT PPPPA VFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMV GVTPKKGGT
Sbjct: 29  LTQSRSFGTTPPPPAAVFVDKNTRVICQGITGKNGTFHTEQAIEYGTKMVAGVTPKKGGT 88

Query: 467 EHLGLPVFNSVAEAKAETKANASVIYVPPSFAAAAIMEGLEAELDLVVCITEGIPQHDMV 288
           EHLGLPVFN+VAEAKAETKANASVIYVP  FAAAAIMEGL AELDL+VCITEGIPQHDMV
Sbjct: 89  EHLGLPVFNTVAEAKAETKANASVIYVPAPFAAAAIMEGLAAELDLIVCITEGIPQHDMV 148

Query: 287 RVKAALLQQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGRIGIVSRSGTLTYEAVFQT 108
           RVKAAL  QSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPG+IGIVSRSGTLTYEAVFQT
Sbjct: 149 RVKAALNSQSKTRLIGPNCPGIIKPGECKIGIMPGYIHKPGKIGIVSRSGTLTYEAVFQT 208

Query: 107 TTVGLGQSTCVGIGGDPFNGTNFVDCMKKFIADPQ 3
           T VGLGQSTCVGIGGDPFNGTNFVDC++KF ADPQ
Sbjct: 209 TAVGLGQSTCVGIGGDPFNGTNFVDCLEKFFADPQ 243


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