BLASTX nr result

ID: Panax21_contig00004956 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004956
         (1121 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39060.3| unnamed protein product [Vitis vinifera]              315   1e-83
ref|XP_002265056.1| PREDICTED: uncharacterized protein LOC100261...   315   1e-83
ref|XP_002525722.1| conserved hypothetical protein [Ricinus comm...   293   7e-77
ref|XP_002319149.1| predicted protein [Populus trichocarpa] gi|2...   286   6e-75
ref|XP_003548714.1| PREDICTED: uncharacterized protein LOC100814...   253   5e-65

>emb|CBI39060.3| unnamed protein product [Vitis vinifera]
          Length = 1025

 Score =  315 bits (807), Expect = 1e-83
 Identities = 182/321 (56%), Positives = 213/321 (66%), Gaps = 2/321 (0%)
 Frame = -3

Query: 1119 TIPAKASSSVLPDGKVSKKGEASRKQRRKSKHKAAEVESVSGNCGINVEPNLVKGFSPVD 940
            TI AKASSSVLPDGK ++K E SRKQRRKSK   A+VE+VS NCG ++E N V+G    +
Sbjct: 710  TIQAKASSSVLPDGKGNRKVEVSRKQRRKSKQVVAQVEAVSVNCGTDLEANPVRGLLDAE 769

Query: 939  VSP-IKQKEEDAEFEGSVGNQASKESPFSI-KKGLGDISSKKISPAATKKKNRKGGLSMF 766
            +      KE DAEFEG+  NQ +KESPF I KK + ++   K S  A KKKN+KGGLSMF
Sbjct: 770  IPQGSDHKEGDAEFEGTPTNQVTKESPFCIQKKEILELPKCK-SSTALKKKNKKGGLSMF 828

Query: 765  LSGALDXXXXXXXXXXXXXXXXXKVEGPVWGGTKISKGPTSLRDIQDEQSKSKEDMTTRS 586
            LSGALD                   EGP WGG KISKG TSLR+I DEQSK+KE   T  
Sbjct: 829  LSGALDDAPKDAPPPPTPKS-----EGPAWGGAKISKGLTSLREILDEQSKTKESQPTSG 883

Query: 585  KDQWEELSDGKSGAKLRLSSFLPSTPIPMVLPGAFQVSDGERGTPPWAASGTPPLISRPS 406
            KDQ E LSD +S  K++LSSFLPS PIP+V     QVSDGE+ TPPW +SGTPP +SRPS
Sbjct: 884  KDQVEYLSDDRSSGKIKLSSFLPSNPIPVVSACTSQVSDGEKCTPPWVSSGTPPSLSRPS 943

Query: 405  LRDXXXXXXXXXXXXXXXSPKTKTSGFSLTXXXXXXXXXXXSNRWFKPEMDTPSTIRSIQ 226
            LR                SPK KT+GFS+             NRWFKPE+DTPS+IRSIQ
Sbjct: 944  LR-HIQMQQGKKLQTLSHSPKVKTAGFSIATGQGSPSDSTGPNRWFKPEVDTPSSIRSIQ 1002

Query: 225  IEERAMKDLKRFYSSVKIVKN 163
            IEE+AMKDLKRFYSSVK+VK+
Sbjct: 1003 IEEKAMKDLKRFYSSVKVVKD 1023


>ref|XP_002265056.1| PREDICTED: uncharacterized protein LOC100261641 [Vitis vinifera]
          Length = 1076

 Score =  315 bits (807), Expect = 1e-83
 Identities = 182/321 (56%), Positives = 213/321 (66%), Gaps = 2/321 (0%)
 Frame = -3

Query: 1119 TIPAKASSSVLPDGKVSKKGEASRKQRRKSKHKAAEVESVSGNCGINVEPNLVKGFSPVD 940
            TI AKASSSVLPDGK ++K E SRKQRRKSK   A+VE+VS NCG ++E N V+G    +
Sbjct: 761  TIQAKASSSVLPDGKGNRKVEVSRKQRRKSKQVVAQVEAVSVNCGTDLEANPVRGLLDAE 820

Query: 939  VSP-IKQKEEDAEFEGSVGNQASKESPFSI-KKGLGDISSKKISPAATKKKNRKGGLSMF 766
            +      KE DAEFEG+  NQ +KESPF I KK + ++   K S  A KKKN+KGGLSMF
Sbjct: 821  IPQGSDHKEGDAEFEGTPTNQVTKESPFCIQKKEILELPKCK-SSTALKKKNKKGGLSMF 879

Query: 765  LSGALDXXXXXXXXXXXXXXXXXKVEGPVWGGTKISKGPTSLRDIQDEQSKSKEDMTTRS 586
            LSGALD                   EGP WGG KISKG TSLR+I DEQSK+KE   T  
Sbjct: 880  LSGALDDAPKDAPPPPTPKS-----EGPAWGGAKISKGLTSLREILDEQSKTKESQPTSG 934

Query: 585  KDQWEELSDGKSGAKLRLSSFLPSTPIPMVLPGAFQVSDGERGTPPWAASGTPPLISRPS 406
            KDQ E LSD +S  K++LSSFLPS PIP+V     QVSDGE+ TPPW +SGTPP +SRPS
Sbjct: 935  KDQVEYLSDDRSSGKIKLSSFLPSNPIPVVSACTSQVSDGEKCTPPWVSSGTPPSLSRPS 994

Query: 405  LRDXXXXXXXXXXXXXXXSPKTKTSGFSLTXXXXXXXXXXXSNRWFKPEMDTPSTIRSIQ 226
            LR                SPK KT+GFS+             NRWFKPE+DTPS+IRSIQ
Sbjct: 995  LR-HIQMQQGKKLQTLSHSPKVKTAGFSIATGQGSPSDSTGPNRWFKPEVDTPSSIRSIQ 1053

Query: 225  IEERAMKDLKRFYSSVKIVKN 163
            IEE+AMKDLKRFYSSVK+VK+
Sbjct: 1054 IEEKAMKDLKRFYSSVKVVKD 1074


>ref|XP_002525722.1| conserved hypothetical protein [Ricinus communis]
            gi|223535022|gb|EEF36705.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1050

 Score =  293 bits (749), Expect = 7e-77
 Identities = 175/318 (55%), Positives = 203/318 (63%), Gaps = 3/318 (0%)
 Frame = -3

Query: 1107 KASSSVLPDGKVSKKGEASRKQRRKSKHKAAEVESVSGNCGINVEPNLVKGFSPVDVSPI 928
            K S  V  D K +KK EASRKQRRKSK K  +VE+VSG  G  V PNL K    V++S I
Sbjct: 736  KTSVVVSSDVKGNKKSEASRKQRRKSKQKGVQVETVSGFTGTEVAPNLRKDPLHVEISQI 795

Query: 927  KQ-KEEDAEFEGSVGNQASKESPFSI-KKGLGDI-SSKKISPAATKKKNRKGGLSMFLSG 757
               K E+  FE SVG+QA KE  F + KK   D+  +K  SPA +KKKNR+GGLSMFLSG
Sbjct: 796  SLGKGEETIFEESVGDQAFKELAFLVQKKDSSDLPKNKSSSPAVSKKKNRRGGLSMFLSG 855

Query: 756  ALDXXXXXXXXXXXXXXXXXKVEGPVWGGTKISKGPTSLRDIQDEQSKSKEDMTTRSKDQ 577
            ALD                   EGP WGG K SKG  SLR+IQDEQSK K +  TR+KDQ
Sbjct: 856  ALDETPKDAAPPPPQTPR---TEGPAWGGAKASKGFASLREIQDEQSKIKLNQPTRNKDQ 912

Query: 576  WEELSDGKSGAKLRLSSFLPSTPIPMVLPGAFQVSDGERGTPPWAASGTPPLISRPSLRD 397
             ++ SDG+S  K  LSSFLPS PIP+V  G  + SD ER  PPW ASGTPPL+SRPSLRD
Sbjct: 913  LDDYSDGRSEGKFLLSSFLPSKPIPVVSSGTLEASDAERSPPPW-ASGTPPLLSRPSLRD 971

Query: 396  XXXXXXXXXXXXXXXSPKTKTSGFSLTXXXXXXXXXXXSNRWFKPEMDTPSTIRSIQIEE 217
                           SPKT+T+GF+++            NRWFKPE DTPS+IRSIQIEE
Sbjct: 972  -IQMQQGKHPQKNSYSPKTRTAGFAISSGQGSPSDSPGMNRWFKPETDTPSSIRSIQIEE 1030

Query: 216  RAMKDLKRFYSSVKIVKN 163
            +AMKDLKRFYS VKIVKN
Sbjct: 1031 KAMKDLKRFYSRVKIVKN 1048


>ref|XP_002319149.1| predicted protein [Populus trichocarpa] gi|222857525|gb|EEE95072.1|
            predicted protein [Populus trichocarpa]
          Length = 1075

 Score =  286 bits (732), Expect = 6e-75
 Identities = 175/322 (54%), Positives = 202/322 (62%), Gaps = 3/322 (0%)
 Frame = -3

Query: 1119 TIPAKASSSVLPDGKVSKKGEASRKQRRKSKHKAAEVESVSGNCGINVEPNLVKGFSPVD 940
            T   KASSSV PD K SKK E SRKQRRKSK +A + E  S     + E + VK F  V+
Sbjct: 758  TALVKASSSVSPDEKGSKKSEVSRKQRRKSKQQAEQREMPSAFTSTDAESSSVKNFMDVE 817

Query: 939  VSPIK-QKEEDAEFEGSVGNQASKESPFSIKKGLG-DISSKKIS-PAATKKKNRKGGLSM 769
            VS     KEE+  F GSV N+ SKE  F ++K  G D+   KIS PA +KKKNRKGGLSM
Sbjct: 818  VSQFPTNKEEETTFGGSVVNRTSKEIGFFVQKKSGSDLPKNKISSPAVSKKKNRKGGLSM 877

Query: 768  FLSGALDXXXXXXXXXXXXXXXXXKVEGPVWGGTKISKGPTSLRDIQDEQSKSKEDMTTR 589
            FLSGALD                   EGP WGG K+SK   SLR IQDEQSK+K ++ TR
Sbjct: 878  FLSGALDEVPKDAAPPPPTPRS----EGPAWGGAKVSKESASLRQIQDEQSKTKLNIPTR 933

Query: 588  SKDQWEELSDGKSGAKLRLSSFLPSTPIPMVLPGAFQVSDGERGTPPWAASGTPPLISRP 409
            +KDQ E+  D +S  K+ LSS +PS PIP+V   A Q SD E  TP W ASGTPPL+SRP
Sbjct: 934  NKDQVEDHFDSRSDGKVLLSSLMPSKPIPLVSVPASQASDAEINTPSW-ASGTPPLLSRP 992

Query: 408  SLRDXXXXXXXXXXXXXXXSPKTKTSGFSLTXXXXXXXXXXXSNRWFKPEMDTPSTIRSI 229
            SLRD               SPK KT GFS++            NRWFKPE+DTPS+IRSI
Sbjct: 993  SLRD-IQMQQGKRHQSISHSPKMKTHGFSVSTGQGSPSDSPGMNRWFKPEVDTPSSIRSI 1051

Query: 228  QIEERAMKDLKRFYSSVKIVKN 163
            QIEE+AMKDLKRFYSSVKIVKN
Sbjct: 1052 QIEEKAMKDLKRFYSSVKIVKN 1073


>ref|XP_003548714.1| PREDICTED: uncharacterized protein LOC100814063 [Glycine max]
          Length = 1080

 Score =  253 bits (647), Expect = 5e-65
 Identities = 161/325 (49%), Positives = 202/325 (62%), Gaps = 9/325 (2%)
 Frame = -3

Query: 1107 KASSSVLPDGKVSKKGEASRKQRRKSKH---KAAEVESV-SGNCGINVEPNLVKGFSPVD 940
            K SSS+LP+GK SKKG+ S+KQRRKS +   +  E+ESV S +  I    +L+     +D
Sbjct: 762  KESSSMLPEGKGSKKGKLSKKQRRKSGNSNIEQTEIESVYSKSEAIPKSEDLLD----ID 817

Query: 939  VS--PIKQKEEDAEFEGSVGNQASKESPFSIKK--GLGDISSKKISPAATKKK-NRKGGL 775
            +   P  + EEDA  E    ++  K+  F ++K   L  + +K  SP A+KKK ++KGGL
Sbjct: 818  IMGVPDSKVEEDAVCEQISADEGGKDLAFVVQKKDALELLKAKGPSPKASKKKRSKKGGL 877

Query: 774  SMFLSGALDXXXXXXXXXXXXXXXXXKVEGPVWGGTKISKGPTSLRDIQDEQSKSKEDMT 595
            SMFLSGALD                   EGP WGG K +KG  SLR+IQDEQSK K +  
Sbjct: 878  SMFLSGALDEAPKEVAPPPPTPTPKH--EGPAWGGAKFTKGSASLREIQDEQSKIKVNKP 935

Query: 594  TRSKDQWEELSDGKSGAKLRLSSFLPSTPIPMVLPGAFQVSDGERGTPPWAASGTPPLIS 415
              SKD+ E+LSD  SG K++LSSFLPS+PIP+    + QVSDGE  TPPWAASGTPP  S
Sbjct: 936  AGSKDKVEDLSDFGSGGKIKLSSFLPSSPIPVTSSRSSQVSDGEISTPPWAASGTPPQPS 995

Query: 414  RPSLRDXXXXXXXXXXXXXXXSPKTKTSGFSLTXXXXXXXXXXXSNRWFKPEMDTPSTIR 235
            RPSLR                SPKT T+GFS+             +RWFKPE++TPS+IR
Sbjct: 996  RPSLR-HIQMQQGKKQQSLSHSPKTTTAGFSIPTCQGSPSETTGVSRWFKPEVETPSSIR 1054

Query: 234  SIQIEERAMKDLKRFYSSVKIVKNQ 160
            SIQIEE+AMKDLKRFYSSVKIV+ Q
Sbjct: 1055 SIQIEEKAMKDLKRFYSSVKIVRKQ 1079


Top