BLASTX nr result

ID: Panax21_contig00004950 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004950
         (528 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314297.1| ABC transporter family protein [Populus tric...   128   1e-42
ref|XP_004145757.1| PREDICTED: ABC transporter F family member 1...   128   7e-42
emb|CAI48070.1| ABC transporter protein [Capsicum chinense]           127   9e-42
gb|AFO64340.1| ABC transporter GCN1 [Hevea brasiliensis]              122   4e-41
ref|XP_003540198.1| PREDICTED: ABC transporter F family member 1...   125   4e-41

>ref|XP_002314297.1| ABC transporter family protein [Populus trichocarpa]
           gi|222850705|gb|EEE88252.1| ABC transporter family
           protein [Populus trichocarpa]
          Length = 599

 Score =  128 bits (322), Expect(2) = 1e-42
 Identities = 66/87 (75%), Positives = 73/87 (83%)
 Frame = -3

Query: 262 QIESLSLTFHGHDLILDSELEXXXXXXXXXXXXXGCGKSTLLASIGHRELPIPEHMDIFH 83
           +IESLS+TFHGHDLI+DSELE             GCGKSTLLA+IG RELPIPEHMDI+H
Sbjct: 74  RIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLAAIGCRELPIPEHMDIYH 133

Query: 82  LTREIEASDMSSLEAVINCDEERLKLE 2
           LTREIEASDMSSLEAVI+CDEERL+LE
Sbjct: 134 LTREIEASDMSSLEAVISCDEERLELE 160



 Score = 70.1 bits (170), Expect(2) = 1e-42
 Identities = 32/47 (68%), Positives = 39/47 (82%)
 Frame = -1

Query: 474 TTKAAAEENGSSSRADNLANGVGSLQISDRTCTGVLCSHPLSRDIRL 334
           ++KAAA  +  +   D L+NGVG+LQISDRTCTGVLCSHPLSRDIR+
Sbjct: 29  SSKAAAAADSQNGGVDKLSNGVGALQISDRTCTGVLCSHPLSRDIRI 75


>ref|XP_004145757.1| PREDICTED: ABC transporter F family member 1-like [Cucumis sativus]
           gi|449526339|ref|XP_004170171.1| PREDICTED: ABC
           transporter F family member 1-like [Cucumis sativus]
          Length = 601

 Score =  128 bits (322), Expect(2) = 7e-42
 Identities = 66/87 (75%), Positives = 73/87 (83%)
 Frame = -3

Query: 262 QIESLSLTFHGHDLILDSELEXXXXXXXXXXXXXGCGKSTLLASIGHRELPIPEHMDIFH 83
           +IESLS+TFHGHDLI+DSELE             GCGKSTLLA+IG RELPIPEHMDI+H
Sbjct: 76  RIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLAAIGCRELPIPEHMDIYH 135

Query: 82  LTREIEASDMSSLEAVINCDEERLKLE 2
           L+REIEASDMSSLEAVI+CDEERLKLE
Sbjct: 136 LSREIEASDMSSLEAVISCDEERLKLE 162



 Score = 67.4 bits (163), Expect(2) = 7e-42
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = -1

Query: 474 TTKAAAEENGSSSRADNLANGVGSLQISDRTCTGVLCSHPLSRDIRL 334
           ++KAAA    S +  D LANGV +LQ+SDRTCTGVLCSHPLSRDIR+
Sbjct: 31  SSKAAAAAAESQNGVDKLANGVDALQLSDRTCTGVLCSHPLSRDIRI 77


>emb|CAI48070.1| ABC transporter protein [Capsicum chinense]
          Length = 250

 Score =  127 bits (319), Expect(2) = 9e-42
 Identities = 65/87 (74%), Positives = 72/87 (82%)
 Frame = -3

Query: 262 QIESLSLTFHGHDLILDSELEXXXXXXXXXXXXXGCGKSTLLASIGHRELPIPEHMDIFH 83
           +IESLS+TFHGHDLI+DSELE             GCGKSTLL +IG RELPIPEHMDIFH
Sbjct: 75  RIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGLRELPIPEHMDIFH 134

Query: 82  LTREIEASDMSSLEAVINCDEERLKLE 2
           L+REIEASDM+SLEAVINCDEERL+LE
Sbjct: 135 LSREIEASDMTSLEAVINCDEERLQLE 161



 Score = 68.2 bits (165), Expect(2) = 9e-42
 Identities = 33/44 (75%), Positives = 37/44 (84%)
 Frame = -1

Query: 465 AAAEENGSSSRADNLANGVGSLQISDRTCTGVLCSHPLSRDIRL 334
           AAAE NG     D+LANG+G L+ISDRTCTGVLCSHPLSRDIR+
Sbjct: 37  AAAESNG----VDSLANGIGDLKISDRTCTGVLCSHPLSRDIRI 76


>gb|AFO64340.1| ABC transporter GCN1 [Hevea brasiliensis]
          Length = 605

 Score =  122 bits (305), Expect(2) = 4e-41
 Identities = 62/87 (71%), Positives = 71/87 (81%)
 Frame = -3

Query: 262 QIESLSLTFHGHDLILDSELEXXXXXXXXXXXXXGCGKSTLLASIGHRELPIPEHMDIFH 83
           +IESLS+TFHGHDLI+DS LE             GCGKSTLL +IG RELPIPEHMDI+H
Sbjct: 80  RIESLSVTFHGHDLIVDSLLELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPEHMDIYH 139

Query: 82  LTREIEASDMSSLEAVINCDEERLKLE 2
           LTREIEASDMS+L+AVI+CDEER+KLE
Sbjct: 140 LTREIEASDMSALQAVISCDEERVKLE 166



 Score = 71.2 bits (173), Expect(2) = 4e-41
 Identities = 32/47 (68%), Positives = 38/47 (80%)
 Frame = -1

Query: 474 TTKAAAEENGSSSRADNLANGVGSLQISDRTCTGVLCSHPLSRDIRL 334
           T  AAA  +  +   DNL+NGVG++QISDRTCTGVLCSHPLSRDIR+
Sbjct: 35  TAAAAAASSADNGSVDNLSNGVGAIQISDRTCTGVLCSHPLSRDIRI 81


>ref|XP_003540198.1| PREDICTED: ABC transporter F family member 1-like isoform 1
           [Glycine max] gi|356543502|ref|XP_003540199.1|
           PREDICTED: ABC transporter F family member 1-like
           isoform 2 [Glycine max]
          Length = 595

 Score =  125 bits (313), Expect(2) = 4e-41
 Identities = 63/87 (72%), Positives = 72/87 (82%)
 Frame = -3

Query: 262 QIESLSLTFHGHDLILDSELEXXXXXXXXXXXXXGCGKSTLLASIGHRELPIPEHMDIFH 83
           +IESLS+TFHGHDLI+DSELE             GCGKSTLL +IG RELPIP+HMDI+H
Sbjct: 70  RIESLSVTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTLLTAIGCRELPIPDHMDIYH 129

Query: 82  LTREIEASDMSSLEAVINCDEERLKLE 2
           LTREIEASDMS+LEAVI+CDEERL+LE
Sbjct: 130 LTREIEASDMSALEAVISCDEERLRLE 156



 Score = 68.2 bits (165), Expect(2) = 4e-41
 Identities = 30/44 (68%), Positives = 36/44 (81%)
 Frame = -1

Query: 465 AAAEENGSSSRADNLANGVGSLQISDRTCTGVLCSHPLSRDIRL 334
           A+++   S   AD LANG+G +QISDRTCTGVLCSHPLSRDIR+
Sbjct: 28  ASSKTTSSEKAADKLANGIGEIQISDRTCTGVLCSHPLSRDIRI 71


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