BLASTX nr result
ID: Panax21_contig00004947
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00004947
(1502 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002277950.2| PREDICTED: tRNA-specific adenosine deaminase... 267 e-110
emb|CBI27108.3| unnamed protein product [Vitis vinifera] 267 e-105
ref|XP_002514518.1| conserved hypothetical protein [Ricinus comm... 234 2e-91
ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|2... 219 2e-85
ref|XP_004135414.1| PREDICTED: tRNA-specific adenosine deaminase... 227 5e-76
>ref|XP_002277950.2| PREDICTED: tRNA-specific adenosine deaminase, chloroplastic-like
[Vitis vinifera]
Length = 1342
Score = 267 bits (682), Expect(2) = e-110
Identities = 148/288 (51%), Positives = 188/288 (65%), Gaps = 11/288 (3%)
Frame = +1
Query: 670 DPSTQEPLKTEVPDATSTAENSVVKRSGRSLWSVISDIVRLRWASHSETXXXXXXXXXXP 849
+PS QEP KTE + T+T ++V+R+GRS WSVI+DIVR+RW SHSET
Sbjct: 876 NPSLQEPPKTEAEEGTTTTGTAIVRRTGRSFWSVIADIVRMRWVSHSETHNSAMKSGGRS 935
Query: 850 --NQSTSSDTWFSGHEPDENNDENVKQGRGSMLQEFSTVDQKQPGDIHPQSQGEVSSSKR 1023
N+S SD WFSG EPDE+NDEN K+ + S+ QE + DQ Q G +QGE S +
Sbjct: 936 SSNESAGSDAWFSGREPDEHNDENAKREKRSVQQESISNDQPQLGKTPTLNQGEGSQATS 995
Query: 1024 SKDKIKHVKLSPPSSNF-ESGLSSKDILSPTFEET--------GTKHTSSGIVIVEPSFP 1176
+KD+ KH +L PSS+ ESGL K S + +E+ + + S +VE + P
Sbjct: 996 TKDQKKHAELDMPSSSILESGLVLKSNSSASGKESLGWYENAESFQGSPSSSAVVESALP 1055
Query: 1177 LPAIRMRRSPAIQGISAVDKTDASGSGTMVTIEQPVSTSLTEVSETMGKDGEIKRRKLQR 1356
P +RRSP ++ IS+ K SGSG+M ++Q LTE+S T GKDGE+KRRKLQR
Sbjct: 1056 TPGRDIRRSPTVEEISSSTKPVGSGSGSMEGMDQKADVPLTEMSGTEGKDGELKRRKLQR 1115
Query: 1357 NKQVPKDRFDEWEEAYILEAEQRKNDETFMREALLEAKKAADIWEVPV 1500
NKQV KD+FDEWEEAY+LE EQRK DE FMREALLEAKKAA+ WEVPV
Sbjct: 1116 NKQVLKDQFDEWEEAYVLENEQRKIDEMFMREALLEAKKAANAWEVPV 1163
Score = 159 bits (402), Expect(2) = e-110
Identities = 105/239 (43%), Positives = 144/239 (60%), Gaps = 17/239 (7%)
Frame = +3
Query: 3 VEETEQRYSLSDERVSSIGPKGEAQRSTKVMSFHEGLLEEAPSSQASLKLDSQSMVQQVG 182
VEET +RY +DER+ + E ++ +K + F E ++ SSQASL L +Q+ VQQ+
Sbjct: 638 VEETRERYYQADERLVQTRSREEVEKPSKQLHFIESAPGDSSSSQASLNLVAQARVQQIA 697
Query: 183 VNKKN-TSLQATV---------RSQLHVKPSSGLGLDDFHSENLATGSSALHQ----GSP 320
+++ TS QAT+ R LHV+ +SG + E +G SA SP
Sbjct: 698 AEERDKTSSQATLKPPPFQSVERGPLHVELTSGFAAQEVSGETPESGFSASSTLPPTRSP 757
Query: 321 SFQHEISGEGRRSETHGEPVNFVSHEDVLDSAAWLQQSSSHFVGEFVEKVRHEVSTSEVK 500
++Q E GE RR ET+GEP+N V+ DVL SA L++SS HFVGEFVEKVRH+V TSE+
Sbjct: 758 TWQREPHGEARRGETYGEPLN-VAPGDVLASADRLEKSSMHFVGEFVEKVRHDVFTSEI- 815
Query: 501 KKERITHETKFVHEGET---HEQKGLGQYSSGDSQQKVHDSSPSSQGSATKGPSHKM*D 668
+KER++ E +++GE H+QKG Y S + Q K HDS SS S TKGPS +M D
Sbjct: 816 QKERVS-EANLLYKGEVPEKHKQKGSSHYGSENLQLKEHDSRRSSGASGTKGPSDEMWD 873
>emb|CBI27108.3| unnamed protein product [Vitis vinifera]
Length = 1151
Score = 267 bits (682), Expect(2) = e-105
Identities = 148/288 (51%), Positives = 188/288 (65%), Gaps = 11/288 (3%)
Frame = +1
Query: 670 DPSTQEPLKTEVPDATSTAENSVVKRSGRSLWSVISDIVRLRWASHSETXXXXXXXXXXP 849
+PS QEP KTE + T+T ++V+R+GRS WSVI+DIVR+RW SHSET
Sbjct: 685 NPSLQEPPKTEAEEGTTTTGTAIVRRTGRSFWSVIADIVRMRWVSHSETHNSAMKSGGRS 744
Query: 850 --NQSTSSDTWFSGHEPDENNDENVKQGRGSMLQEFSTVDQKQPGDIHPQSQGEVSSSKR 1023
N+S SD WFSG EPDE+NDEN K+ + S+ QE + DQ Q G +QGE S +
Sbjct: 745 SSNESAGSDAWFSGREPDEHNDENAKREKRSVQQESISNDQPQLGKTPTLNQGEGSQATS 804
Query: 1024 SKDKIKHVKLSPPSSNF-ESGLSSKDILSPTFEET--------GTKHTSSGIVIVEPSFP 1176
+KD+ KH +L PSS+ ESGL K S + +E+ + + S +VE + P
Sbjct: 805 TKDQKKHAELDMPSSSILESGLVLKSNSSASGKESLGWYENAESFQGSPSSSAVVESALP 864
Query: 1177 LPAIRMRRSPAIQGISAVDKTDASGSGTMVTIEQPVSTSLTEVSETMGKDGEIKRRKLQR 1356
P +RRSP ++ IS+ K SGSG+M ++Q LTE+S T GKDGE+KRRKLQR
Sbjct: 865 TPGRDIRRSPTVEEISSSTKPVGSGSGSMEGMDQKADVPLTEMSGTEGKDGELKRRKLQR 924
Query: 1357 NKQVPKDRFDEWEEAYILEAEQRKNDETFMREALLEAKKAADIWEVPV 1500
NKQV KD+FDEWEEAY+LE EQRK DE FMREALLEAKKAA+ WEVPV
Sbjct: 925 NKQVLKDQFDEWEEAYVLENEQRKIDEMFMREALLEAKKAANAWEVPV 972
Score = 144 bits (362), Expect(2) = e-105
Identities = 97/236 (41%), Positives = 132/236 (55%), Gaps = 14/236 (5%)
Frame = +3
Query: 3 VEETEQRYSLSDERVSSIGPKGEAQRSTKVMSFHEGLLEEAPSSQASLKLDSQSMVQQVG 182
VEET +RY +DER+ + E ++ +K + F E ++ SSQASL L +Q+ VQQ+
Sbjct: 466 VEETRERYYQADERLVQTRSREEVEKPSKQLHFIESAPGDSSSSQASLNLVAQARVQQIA 525
Query: 183 VNKKN-TSLQATV---------RSQLHVKPSSGLGLDDFHSENLATGSSALHQ----GSP 320
+++ TS QAT+ R LHV+ +SG + E +G SA SP
Sbjct: 526 AEERDKTSSQATLKPPPFQSVERGPLHVELTSGFAAQEVSGETPESGFSASSTLPPTRSP 585
Query: 321 SFQHEISGEGRRSETHGEPVNFVSHEDVLDSAAWLQQSSSHFVGEFVEKVRHEVSTSEVK 500
++Q E GE RR ET+GEP+N V+ DVL SA L++SS HFVGEFVEKVRH+V TSE++
Sbjct: 586 TWQREPHGEARRGETYGEPLN-VAPGDVLASADRLEKSSMHFVGEFVEKVRHDVFTSEIQ 644
Query: 501 KKERITHETKFVHEGETHEQKGLGQYSSGDSQQKVHDSSPSSQGSATKGPSHKM*D 668
K ++G Y S + Q K HDS SS S TKGPS +M D
Sbjct: 645 K------------------ERGSSHYGSENLQLKEHDSRRSSGASGTKGPSDEMWD 682
>ref|XP_002514518.1| conserved hypothetical protein [Ricinus communis]
gi|223546122|gb|EEF47624.1| conserved hypothetical
protein [Ricinus communis]
Length = 1624
Score = 234 bits (597), Expect(2) = 2e-91
Identities = 143/306 (46%), Positives = 186/306 (60%), Gaps = 28/306 (9%)
Frame = +1
Query: 667 TDPSTQEPLKTEVPDATSTAENSVVKRSGRSLWSVISDIVRLRWASHSETXXXXXXXXXX 846
TD S QEP + E +++ +++VV+R+GRSLWS+I+D+VRLRW S +ET
Sbjct: 824 TDLSLQEPPEAEAHKGSTSNKDAVVRRTGRSLWSIIADVVRLRWGSRAETPKSGRRSGGK 883
Query: 847 P--NQSTSSDTWFSGHEPDENNDENVKQGRGSMLQEFSTVDQKQPGDIHPQSQGEVSSSK 1020
N S SS+ WFSG +P+EN+D+NV++ R S+ +E S+ Q G Q QGEVSS+
Sbjct: 884 SSSNDSVSSEAWFSGRDPEENSDKNVERER-SVTKETSSSHHLQLGRTTSQGQGEVSSTS 942
Query: 1021 RSKDKIKHVKL--SPPSSNFESGLSSKDILSPTFEET--------------GTKHTSSGI 1152
SK KI +++ SPPS+ + G +SK I SP+ EE G SS +
Sbjct: 943 VSKSKITRLEVDTSPPSTTLKFGSTSKGISSPSEEENLVWGEDGKSFEGTQGHDQKSSHV 1002
Query: 1153 VIVEPSFPLPAIRMRRSPAI--QGISAV--------DKTDASGSGTMVTIEQPVSTSLTE 1302
FP + SP + G+S K D S SG+M +EQPVST TE
Sbjct: 1003 ------FPPSTVGKSSSPLLPSSGMSTFIVEESYGGGKADMSISGSMELMEQPVSTKSTE 1056
Query: 1303 VSETMGKDGEIKRRKLQRNKQVPKDRFDEWEEAYILEAEQRKNDETFMREALLEAKKAAD 1482
VS G +GE+K+R+LQRNKQVPKD+FDEWEEAY+ E EQRK DE FMREALLEAKKAAD
Sbjct: 1057 VSGAEGMEGELKQRRLQRNKQVPKDKFDEWEEAYVRENEQRKIDEMFMREALLEAKKAAD 1116
Query: 1483 IWEVPV 1500
WEVPV
Sbjct: 1117 TWEVPV 1122
Score = 130 bits (326), Expect(2) = 2e-91
Identities = 84/236 (35%), Positives = 124/236 (52%), Gaps = 14/236 (5%)
Frame = +3
Query: 3 VEETEQRYSLSDERVSSIGPKGEAQRSTKVMSFHEGLLEEAPSSQASLKLDSQSMVQQVG 182
++ET +R + + ER++ + EA R+++V SF E E+ SSQASL + SQ+ +QQ+
Sbjct: 590 IQETRERCNQTAERITEAKSRNEAHRTSEVPSFQEKPSEQPSSSQASLNMVSQARIQQID 649
Query: 183 VNKKN----------TSLQATVRSQLHVKPSSGLGLDDFHSENLATGSSALHQGS----P 320
V N S Q R LHV P S D + SSA ++ S P
Sbjct: 650 VEDGNYRSSQAMMMPPSHQVVNRGSLHVNPISETATQDVSGRTSDSSSSAFYENSAGRTP 709
Query: 321 SFQHEISGEGRRSETHGEPVNFVSHEDVLDSAAWLQQSSSHFVGEFVEKVRHEVSTSEVK 500
+ E G + E HGEP+ ++ ED + SA L++SS FVGEF+EK R EVS+SE +
Sbjct: 710 TSFQEPYGRDGKDEYHGEPLKLLTPEDAMGSAYRLEESSMQFVGEFMEKSRQEVSSSETR 769
Query: 501 KKERITHETKFVHEGETHEQKGLGQYSSGDSQQKVHDSSPSSQGSATKGPSHKM*D 668
+++ + + EG+ ++K Q+ S Q K DS S GS KGPS +M D
Sbjct: 770 REKDFKQK---LVEGKKEKRKNSSQFGSESLQLKEQDSKRLSGGSGEKGPSDEMWD 822
>ref|XP_002312358.1| predicted protein [Populus trichocarpa] gi|222852178|gb|EEE89725.1|
predicted protein [Populus trichocarpa]
Length = 1364
Score = 219 bits (559), Expect(2) = 2e-85
Identities = 132/296 (44%), Positives = 176/296 (59%), Gaps = 18/296 (6%)
Frame = +1
Query: 667 TDPSTQEPLKTEVPDATSTAENSVVKRSGRSLWSVISDIVRLRWASHSETXXXXXXXXXX 846
TDPS QEP +TE P ++ E+ VV+R+GRSLWS+IS++V LRW SH+ET
Sbjct: 899 TDPSIQEPTETEAPAGSTETESGVVRRTGRSLWSIISNVVLLRWGSHAETPKSAWRSGGK 958
Query: 847 P--NQSTSSDTWFSGHEPDENNDENVKQGRGSMLQEFSTVDQKQPGDIHPQSQGEVSSSK 1020
N S +S+ WFSGHEPDEN+DEN+K+ R SM +E ++ Q QP + Q Q + S +
Sbjct: 959 SSSNDSVTSEAWFSGHEPDENSDENMKRERESMPKEAASSHQLQPTNTFSQDQAKASDTF 1018
Query: 1021 RSKDKIKHVK--LSPPSSNFESGLSSKDILSPTFEE--------------TGTKHTSSGI 1152
SK+ I+ ++ S +S +SK I +P+ EE T + +
Sbjct: 1019 VSKNIIRQLEGYTSSRPIMLKSKSTSKGISTPSEEENLGWSQDGNDFQVATSSTEVDESL 1078
Query: 1153 VIVEPSFPLPAIRMRRSPAIQGISAVDKTDASGSGTMVTIEQPVSTSLTEVSETMGKDGE 1332
+++ PS P ++ S KT+ S SG+M EQ S L VS + GK E
Sbjct: 1079 LVLLPS------TSTSDPIVEESSGTAKTNVSVSGSM---EQLDSEMLIGVSGSEGKGVE 1129
Query: 1333 IKRRKLQRNKQVPKDRFDEWEEAYILEAEQRKNDETFMREALLEAKKAADIWEVPV 1500
K+R+LQRNKQV +DRFDEWEEAY+ E+E RK DE FMREALLEAKKAAD WEVPV
Sbjct: 1130 SKQRRLQRNKQVERDRFDEWEEAYLRESELRKTDEMFMREALLEAKKAADSWEVPV 1185
Score = 124 bits (312), Expect(2) = 2e-85
Identities = 86/235 (36%), Positives = 115/235 (48%), Gaps = 15/235 (6%)
Frame = +3
Query: 3 VEETEQRYSLSDERVSSIGPKGEAQRSTKVMSFHEGLLEEAP-SSQASLKLDSQSMVQQV 179
+ ET +R +E V+ + E R T +E +EA SQAS + SQ +Q+V
Sbjct: 662 IRETRERTDKIEENVTQFKSRNEVWRPTYESRHNERTSQEAALDSQASANMVSQVGIQEV 721
Query: 180 GVNKKNTSL----------QATVRSQLHVKPSSGLGLDDFHSENLATGSSALH----QGS 317
V + N Q R V P S + +G+SAL+ G+
Sbjct: 722 DVGEGNQRTSQAIMMPPPPQLLARGTACVNPPSKNANQEISRGTSESGASALYIISGGGT 781
Query: 318 PSFQHEISGEGRRSETHGEPVNFVSHEDVLDSAAWLQQSSSHFVGEFVEKVRHEVSTSEV 497
P FQ E G+ + E + EP N + D L S L++SS FVGEFVEK RHEV SE+
Sbjct: 782 PVFQQETYGKNEKDEIYREPSNLILTGDALGSTHRLEESSMQFVGEFVEKARHEVLASEI 841
Query: 498 KKKERITHETKFVHEGETHEQKGLGQYSSGDSQQKVHDSSPSSQGSATKGPSHKM 662
+KE+ +TK +E E QK GQY S D Q K DS SS+GS KGPS +M
Sbjct: 842 -QKEKTVSDTKLAYEAEKQRQKSSGQYDSEDLQFKRQDSRQSSRGSREKGPSDEM 895
>ref|XP_004135414.1| PREDICTED: tRNA-specific adenosine deaminase, chloroplastic-like
[Cucumis sativus]
Length = 1264
Score = 227 bits (579), Expect(2) = 5e-76
Identities = 136/284 (47%), Positives = 179/284 (63%), Gaps = 7/284 (2%)
Frame = +1
Query: 670 DPSTQEPLKTEVPDATSTAENSVVKRSGRSLWSVISDIVRLRWASHSETXXXXXXXXXX- 846
D +T++P KT+ P+ ++ +EN++VKRSG+SLW+VISDIVRLRW S +ET
Sbjct: 811 DSTTEQPPKTDDPEISAHSENAIVKRSGKSLWNVISDIVRLRWNSRTETSESALRSGGRN 870
Query: 847 -PNQSTSSDTWFSGHEPDENNDENVKQGRGSMLQEFSTVDQKQPGDIHPQSQGEVSSSKR 1023
PN+S S++TWFSG E +E+ +N K GR + + EF+++DQ + ++ Q Q ++S K+
Sbjct: 871 SPNESVSNETWFSGREHEES--DNTKMGR-TTVSEFTSLDQLEEPNLSAQGQ-DLSDDKK 926
Query: 1024 SKDKIKHVKLSPPSSNFESGLSSKDILSPTFEETGTKHT-----SSGIVIVEPSFPLPAI 1188
K K V +P SSN S L + E T T SSG+ I S PL
Sbjct: 927 VKSKYYEVD-TPSSSNTVEPKPSGGTLLVSGEAILTDGTKVEVISSGLDIEPSSIPLSTQ 985
Query: 1189 RMRRSPAIQGISAVDKTDASGSGTMVTIEQPVSTSLTEVSETMGKDGEIKRRKLQRNKQV 1368
++ SP IQ +S KT+A S + + S L+E S T KDGE+K+RKLQRNKQV
Sbjct: 986 GIKESPTIQEMSQSGKTEAFASSSADQLGHSFSAKLSETSTTETKDGEVKQRKLQRNKQV 1045
Query: 1369 PKDRFDEWEEAYILEAEQRKNDETFMREALLEAKKAADIWEVPV 1500
KDRFDEWEEAY+LE EQRK DE FMREAL EAKKAAD WEVPV
Sbjct: 1046 LKDRFDEWEEAYLLETEQRKIDEMFMREALAEAKKAADTWEVPV 1089
Score = 85.5 bits (210), Expect(2) = 5e-76
Identities = 74/232 (31%), Positives = 112/232 (48%), Gaps = 12/232 (5%)
Frame = +3
Query: 3 VEETEQRYSLSDERVSSIGPKGEAQRSTKVMSFHEGLLEEAPSSQASLKLDSQSMVQQVG 182
V+ET R+ +++RV E++ EE Q S+ L SQS Q +G
Sbjct: 593 VKETIIRHGQNNDRVVQTESGKESKNH-----------EEKLKVQGSINLSSQSSYQGIG 641
Query: 183 VN----KKNTSL------QATVRSQLHVKPSSGLG-LDDFHSENLATGSSALHQG-SPSF 326
VN K++ ++ Q R L +S +G + + ++G+S + G SP+
Sbjct: 642 VNIDENKRSQAVLMPPPSQLAARDSLRTDSTSEMGQVVSRRTSGSSSGASYMQSGGSPAL 701
Query: 327 QHEISGEGRRSETHGEPVNFVSHEDVLDSAAWLQQSSSHFVGEFVEKVRHEVSTSEVKKK 506
+ G E+ EPV ++ +D L SA L++SS+ FVGEF+EK R+E+ SE
Sbjct: 702 DRKSYRGGGADESIEEPVYVITPDDTLGSADRLERSSAQFVGEFMEKSRNELLISET-HA 760
Query: 507 ERITHETKFVHEGETHEQKGLGQYSSGDSQQKVHDSSPSSQGSATKGPSHKM 662
ER T E +HE + G+ D Q+K HDS SS S TKGP +M
Sbjct: 761 ERNTSEVDLLHEEQD------GESDLVDYQRKDHDSRLSSGSSGTKGPPDEM 806