BLASTX nr result

ID: Panax21_contig00004944 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004944
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein ...   219   3e-55
emb|CBI32068.3| unnamed protein product [Vitis vinifera]              219   3e-55
ref|XP_002520196.1| conserved hypothetical protein [Ricinus comm...   216   3e-54
ref|XP_002314629.1| SIN3 component, histone deacetylase complex ...   202   6e-50
ref|XP_002311786.1| SIN3 component, histone deacetylase complex ...   199   3e-49

>ref|XP_002267856.2| PREDICTED: paired amphipathic helix protein Sin3-like 4-like [Vitis
            vinifera]
          Length = 1421

 Score =  219 bits (559), Expect = 3e-55
 Identities = 123/224 (54%), Positives = 139/224 (62%), Gaps = 10/224 (4%)
 Frame = +2

Query: 5    GHFKIEREEGELSPNGDFEEDNFQAYGD------SDTGATSMQYQTRHXXXXXXXXXXXX 166
            G+ KIEREEGELSPNGDFEEDNF  YGD      S   A S QYQTRH            
Sbjct: 958  GNSKIEREEGELSPNGDFEEDNFAVYGDAGVEGKSKDTAASRQYQTRHGVEEICCGEAGG 1017

Query: 167  -NDVDAXXXXXXXXXXXXXXXXNASANGDASVSESAXXXXXXXXXXXXXXXXXXXXTKAE 343
             ND DA                NAS NGD S SES                      KAE
Sbjct: 1018 ENDADADDEGEESAQRSSEDSENASENGDVSGSESGEGEECSREEHEEDGDHDEHDNKAE 1077

Query: 344  SEGEAEGITNARDIEGDGTLLPFSERFLQSVKPLTMHVPPVLQFKEKSSQIFYGNDSFYI 523
            SEGEAEG+ +A D+EGDGTLLPFSERFL +VKPL  HVPP LQ KEK+S++FYGNDSFY+
Sbjct: 1078 SEGEAEGMADAHDVEGDGTLLPFSERFLLTVKPLAKHVPPSLQDKEKNSRVFYGNDSFYV 1137

Query: 524  LFRLHQTLYDRIKSVK---SSAEKKWRGSTDIYATDLCAKFMNA 646
            LFRLHQTLY+R++S K   SS E+KWR S+D  +TDL A+FMNA
Sbjct: 1138 LFRLHQTLYERMQSAKLNSSSGERKWRASSDTNSTDLYARFMNA 1181


>emb|CBI32068.3| unnamed protein product [Vitis vinifera]
          Length = 1445

 Score =  219 bits (559), Expect = 3e-55
 Identities = 123/224 (54%), Positives = 139/224 (62%), Gaps = 10/224 (4%)
 Frame = +2

Query: 5    GHFKIEREEGELSPNGDFEEDNFQAYGD------SDTGATSMQYQTRHXXXXXXXXXXXX 166
            G+ KIEREEGELSPNGDFEEDNF  YGD      S   A S QYQTRH            
Sbjct: 982  GNSKIEREEGELSPNGDFEEDNFAVYGDAGVEGKSKDTAASRQYQTRHGVEEICCGEAGG 1041

Query: 167  -NDVDAXXXXXXXXXXXXXXXXNASANGDASVSESAXXXXXXXXXXXXXXXXXXXXTKAE 343
             ND DA                NAS NGD S SES                      KAE
Sbjct: 1042 ENDADADDEGEESAQRSSEDSENASENGDVSGSESGEGEECSREEHEEDGDHDEHDNKAE 1101

Query: 344  SEGEAEGITNARDIEGDGTLLPFSERFLQSVKPLTMHVPPVLQFKEKSSQIFYGNDSFYI 523
            SEGEAEG+ +A D+EGDGTLLPFSERFL +VKPL  HVPP LQ KEK+S++FYGNDSFY+
Sbjct: 1102 SEGEAEGMADAHDVEGDGTLLPFSERFLLTVKPLAKHVPPSLQDKEKNSRVFYGNDSFYV 1161

Query: 524  LFRLHQTLYDRIKSVK---SSAEKKWRGSTDIYATDLCAKFMNA 646
            LFRLHQTLY+R++S K   SS E+KWR S+D  +TDL A+FMNA
Sbjct: 1162 LFRLHQTLYERMQSAKLNSSSGERKWRASSDTNSTDLYARFMNA 1205


>ref|XP_002520196.1| conserved hypothetical protein [Ricinus communis]
            gi|223540688|gb|EEF42251.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1452

 Score =  216 bits (550), Expect = 3e-54
 Identities = 117/223 (52%), Positives = 137/223 (61%), Gaps = 11/223 (4%)
 Frame = +2

Query: 11   FKIEREEGELSPNGDFEEDNFQAYGDSDT--------GATSMQYQTRHXXXXXXXXXXXX 166
            FKIEREEGELSPNGDFEEDNF AYG++ +         A + QYQTRH            
Sbjct: 1002 FKIEREEGELSPNGDFEEDNFAAYGEAGSEAVHKAKENAVNRQYQTRHGEEETCGEAGGE 1061

Query: 167  NDVDAXXXXXXXXXXXXXXXXNASANGDASVSESAXXXXXXXXXXXXXXXXXXXXTKAES 346
            ND DA                NAS NG+ S SES                      KAES
Sbjct: 1062 NDADADDEGDESAHRSSEDSENASENGEVSGSESGDGEDCSREEHEEAGEHDEHDNKAES 1121

Query: 347  EGEAEGITNARDIEGDGTLLPFSERFLQSVKPLTMHVPPVLQFKEKSSQIFYGNDSFYIL 526
            EGEAEG+ +A D+EG+GT+LPFSERFL +VKPL  HVPP L  K+K S++FYGNDSFY+L
Sbjct: 1122 EGEAEGMADAHDVEGEGTMLPFSERFLLNVKPLAKHVPPALHDKDKGSRVFYGNDSFYVL 1181

Query: 527  FRLHQTLYDRIKSVK---SSAEKKWRGSTDIYATDLCAKFMNA 646
            FRLHQTLY+RI+S K   SSAE+KWR S D   TDL A+FM+A
Sbjct: 1182 FRLHQTLYERIQSAKINSSSAERKWRASNDTNPTDLYARFMSA 1224


>ref|XP_002314629.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
            gi|222863669|gb|EEF00800.1| SIN3 component, histone
            deacetylase complex [Populus trichocarpa]
          Length = 1385

 Score =  202 bits (513), Expect = 6e-50
 Identities = 113/215 (52%), Positives = 129/215 (60%), Gaps = 3/215 (1%)
 Frame = +2

Query: 11   FKIEREEGELSPNGDFEEDNFQAYGDSDTGATSMQYQTRHXXXXXXXXXXXXNDVDAXXX 190
            FKIEREEGELSPNGDFEEDNF  YG++   A      +              ND DA   
Sbjct: 952  FKIEREEGELSPNGDFEEDNFAFYGEAGLEAAHKAKDSA---------VRGENDADADDE 1002

Query: 191  XXXXXXXXXXXXXNASANGDASVSESAXXXXXXXXXXXXXXXXXXXXTKAESEGEAEGIT 370
                         NAS NGD S SES                      KAESEGEAEG+ 
Sbjct: 1003 GDESAQRSTEDSENASENGDVSGSESGDGEDCSREEHEEDGDHDEHDIKAESEGEAEGMA 1062

Query: 371  NARDIEGDGTLLPFSERFLQSVKPLTMHVPPVLQFKEKSSQIFYGNDSFYILFRLHQTLY 550
            +A D+EGDGT+LPFSERFL +VKPL  HVPP L  KEK S++FYGNDSFY+LFRLHQTLY
Sbjct: 1063 DAHDVEGDGTMLPFSERFLLNVKPLAKHVPPSLHDKEKVSRVFYGNDSFYVLFRLHQTLY 1122

Query: 551  DRIKSVK---SSAEKKWRGSTDIYATDLCAKFMNA 646
            +RI+S K   SSAE+KWR S D   TDL A+FM+A
Sbjct: 1123 ERIQSAKVNSSSAERKWRASNDTSPTDLYARFMSA 1157


>ref|XP_002311786.1| SIN3 component, histone deacetylase complex [Populus trichocarpa]
            gi|222851606|gb|EEE89153.1| SIN3 component, histone
            deacetylase complex [Populus trichocarpa]
          Length = 1343

 Score =  199 bits (507), Expect = 3e-49
 Identities = 111/215 (51%), Positives = 128/215 (59%), Gaps = 3/215 (1%)
 Frame = +2

Query: 11   FKIEREEGELSPNGDFEEDNFQAYGDSDTGATSMQYQTRHXXXXXXXXXXXXNDVDAXXX 190
            FKIEREEGELSPNGDFEEDNF  YG++   A     +               ND DA   
Sbjct: 888  FKIEREEGELSPNGDFEEDNFAVYGEAGLEAAHKGEECGEAGGE--------NDADADDE 939

Query: 191  XXXXXXXXXXXXXNASANGDASVSESAXXXXXXXXXXXXXXXXXXXXTKAESEGEAEGIT 370
                         NAS NGD S SES                      KAESEGEAEG+ 
Sbjct: 940  GGESAQRSSEDSENASENGDVSGSESGDGEDCSREEHEEDGDHDEHDNKAESEGEAEGMA 999

Query: 371  NARDIEGDGTLLPFSERFLQSVKPLTMHVPPVLQFKEKSSQIFYGNDSFYILFRLHQTLY 550
            +A D+EG+GT+LPFSERFL +VKPL  HVPP L  KEK  ++FYGNDSFY+LFRLHQTLY
Sbjct: 1000 DAHDVEGEGTILPFSERFLLNVKPLAKHVPPSLHDKEKGFRVFYGNDSFYVLFRLHQTLY 1059

Query: 551  DRIKSVK---SSAEKKWRGSTDIYATDLCAKFMNA 646
            +RI+S K   SSAE+KWR S D   TDL A+FM+A
Sbjct: 1060 ERIQSAKVNSSSAERKWRASNDTSPTDLYARFMSA 1094


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