BLASTX nr result

ID: Panax21_contig00004939 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004939
         (884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283273.1| PREDICTED: ATP-dependent zinc metalloproteas...   315   7e-84
ref|XP_002323508.1| predicted protein [Populus trichocarpa] gi|2...   299   7e-79
ref|XP_002530989.1| Mitochondrial respiratory chain complexes as...   277   2e-72
ref|XP_004164623.1| PREDICTED: ATP-dependent zinc metalloproteas...   269   7e-70
ref|XP_004142062.1| PREDICTED: ATP-dependent zinc metalloproteas...   269   7e-70

>ref|XP_002283273.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 10,
           mitochondrial [Vitis vinifera]
           gi|297746048|emb|CBI16104.3| unnamed protein product
           [Vitis vinifera]
          Length = 820

 Score =  315 bits (808), Expect = 7e-84
 Identities = 164/291 (56%), Positives = 197/291 (67%), Gaps = 1/291 (0%)
 Frame = +3

Query: 15  GSGRQILSPTYLSELDSVFKNPRLRRLFCSKAPKRRNYENYFXXXXXXXXXXXXXXXXXX 194
           G+ R  +  +YLS+L+ V  NPR+RR   S+APK++NYEN++                  
Sbjct: 65  GASRGFVGKSYLSDLNFVLANPRIRRFLSSEAPKKKNYENFYPKNKKETPKGEEQKSESK 124

Query: 195 XXXXXXXHGNYREN-MKQYQNVLTPLMFIGFVLSFIVMGPREQKQISFQEFKNQLLEPGL 371
                  HGN++E  MKQ QNVLTPL+ IG  LS    GPREQKQISFQEFKN+LLEPGL
Sbjct: 125 EDSNTDDHGNFQETFMKQLQNVLTPLLVIGLFLSSFSFGPREQKQISFQEFKNKLLEPGL 184

Query: 372 VDHIXXXXXXXXXXXXXXXXXTTNETNDESIQSPINGSRGKGNVSQCKYFFNIGSVDTFE 551
           VDHI                   N+ +D+ +Q PINGS  +GN +Q K+FFNIGSV++FE
Sbjct: 185 VDHIVVSNKSVAKVYVRGSPL--NQASDDVVQGPINGSPARGN-AQYKFFFNIGSVESFE 241

Query: 552 EKLEEAQDALGIDPHNYVPVTYVSEMDWFVELMRFAPTALLLGSLWYMGKRLQXXXXXXX 731
           EKLEEAQ+ LGIDPHNYVPVTYVSEM W+ ELMRFAPT  LLG+LWYMG+R+Q       
Sbjct: 242 EKLEEAQEVLGIDPHNYVPVTYVSEMVWYQELMRFAPTLALLGALWYMGRRMQSGLGVGG 301

Query: 732 XXXXXXXXIFNMGKANVTKLDKNAKNKVFFKDVAGCDEAKQEIMEVVHFLK 884
                   IFN+GKA++ K+DKNAKNKVFFKDVAGCDEAKQEIME VHFLK
Sbjct: 302 TGGRGGRGIFNIGKAHIMKVDKNAKNKVFFKDVAGCDEAKQEIMEFVHFLK 352


>ref|XP_002323508.1| predicted protein [Populus trichocarpa] gi|222868138|gb|EEF05269.1|
           predicted protein [Populus trichocarpa]
          Length = 794

 Score =  299 bits (765), Expect = 7e-79
 Identities = 153/293 (52%), Positives = 195/293 (66%), Gaps = 2/293 (0%)
 Frame = +3

Query: 12  AGSGRQILSPTYLSELDSVFKNPRLRRLFCSKAPKRRNYENYF--XXXXXXXXXXXXXXX 185
           +G+G+QI+S T LS L+S+  NPR+RR FCS+APK+R YENY+                 
Sbjct: 43  SGAGKQIVSSTQLSNLNSILANPRVRRFFCSEAPKKRKYENYYPKDKKEIPKANESKSES 102

Query: 186 XXXXXXXXXXHGNYRENMKQYQNVLTPLMFIGFVLSFIVMGPREQKQISFQEFKNQLLEP 365
                      G+ +  +K +QN++TPL+F+ FV S +    +EQKQISFQEFKN+LLEP
Sbjct: 103 KGLEDSGGAGGGDSQNTLKLFQNIITPLLFLAFVYSSMFFNTQEQKQISFQEFKNKLLEP 162

Query: 366 GLVDHIXXXXXXXXXXXXXXXXXTTNETNDESIQSPINGSRGKGNVSQCKYFFNIGSVDT 545
           GLVDHI                   N++ D      +NG+  + N  Q K++FNI SV++
Sbjct: 163 GLVDHIVVSNKSVAKVHVRNSPQNANQSGDN-----VNGTSSRTNDGQYKFYFNIVSVES 217

Query: 546 FEEKLEEAQDALGIDPHNYVPVTYVSEMDWFVELMRFAPTALLLGSLWYMGKRLQXXXXX 725
           FEEKLEEAQ ALGIDPH++VPVTYV+E++WF ELMRFAPTA+LLG LW+MG+R+Q     
Sbjct: 218 FEEKLEEAQQALGIDPHDFVPVTYVNEVNWFQELMRFAPTAMLLGVLWFMGRRMQSGLGV 277

Query: 726 XXXXXXXXXXIFNMGKANVTKLDKNAKNKVFFKDVAGCDEAKQEIMEVVHFLK 884
                     IFNMGKA++TKLDKNAK+KVFFKDVAGCDEAKQEIME VHFLK
Sbjct: 278 GGPGGRGGRGIFNMGKAHITKLDKNAKDKVFFKDVAGCDEAKQEIMEFVHFLK 330


>ref|XP_002530989.1| Mitochondrial respiratory chain complexes assembly protein AFG3,
           putative [Ricinus communis] gi|223529441|gb|EEF31401.1|
           Mitochondrial respiratory chain complexes assembly
           protein AFG3, putative [Ricinus communis]
          Length = 833

 Score =  277 bits (709), Expect = 2e-72
 Identities = 148/294 (50%), Positives = 188/294 (63%), Gaps = 2/294 (0%)
 Frame = +3

Query: 9   GAGSGRQIL-SPTYLSELDSVFKNPRLRRLFCSKAPKRRNYENYFXXXXXXXXXXXXXXX 185
           G G+G+Q+L S T  S  +S+  NPR+R  F ++APK+R+YENY                
Sbjct: 75  GGGAGKQLLLSKTNFSNSNSILANPRVRLFFSTQAPKKRSYENYHPKGKKEIPKENEGNS 134

Query: 186 XXXXXXXXXXHGNYRENMKQYQNVLTPLMFIGFVLSFIVMGPREQKQISFQEFKNQLLEP 365
                      GN +  MK +QN + PL+FI F+ S ++ G +E  QISFQEFK +LLEP
Sbjct: 135 ANRGGGAGAGGGNPQNFMKPFQNFIAPLLFIAFLSSSVLFGAQEPNQISFQEFKTKLLEP 194

Query: 366 GLVDHIXXXXXXXXXXXXXXXXXTTNETNDESI-QSPINGSRGKGNVSQCKYFFNIGSVD 542
           GLVD I                   N+T D+ + Q P +GS  + +  Q  Y F IGSV+
Sbjct: 195 GLVDRIVVSNKSVAKVYVRSLPKNVNQTGDDIVVQVPASGSPDRRSPRQ--YHFTIGSVE 252

Query: 543 TFEEKLEEAQDALGIDPHNYVPVTYVSEMDWFVELMRFAPTALLLGSLWYMGKRLQXXXX 722
           +FEEKLEEAQ ALG+DPH+YVPVTY++E++W  ELMRFAPTALLLG+LW+MG+R+Q    
Sbjct: 253 SFEEKLEEAQQALGVDPHDYVPVTYMNEVNWSQELMRFAPTALLLGTLWFMGRRMQSGLG 312

Query: 723 XXXXXXXXXXXIFNMGKANVTKLDKNAKNKVFFKDVAGCDEAKQEIMEVVHFLK 884
                      IFNMGKA+VTKLDKNAK+K+FFKDVAGCDEAKQEIME VHFLK
Sbjct: 313 VGGSGGRGGRGIFNMGKAHVTKLDKNAKDKIFFKDVAGCDEAKQEIMEFVHFLK 366


>ref|XP_004164623.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 10,
           mitochondrial-like [Cucumis sativus]
          Length = 824

 Score =  269 bits (687), Expect = 7e-70
 Identities = 145/296 (48%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
 Frame = +3

Query: 3   SIGAGSGRQILSPTYLSELDSVFKNPRLRRLFCSKAPKRRNYENYFXXXXXXXXXXXXXX 182
           S G G+G+Q++S  YL  ++    NPR+RRLF S +P ++NYENY+              
Sbjct: 65  STGVGAGKQLVSRKYLDNVNYFLANPRVRRLFSSGSPNKKNYENYYPKDQKEIPKAKDQK 124

Query: 183 XXXXXXXXXXXHGNYRENM-KQYQNVLTPLMFIGFVL-SFIVMGPREQKQISFQEFKNQL 356
                      H + +E   KQ+Q+++  ++F G +L SF+  G  EQKQISFQEF+N+L
Sbjct: 125 TNSKDSNSG--HTDSQEKFTKQFQDLM--ILFFGCILASFVFDGSNEQKQISFQEFRNEL 180

Query: 357 LEPGLVDHIXXXXXXXXXXXXXXXXXTTNETNDESIQSPINGSRGKGNVSQCKYFFNIGS 536
           LEPGLVD I                  T +  D+  Q    G  G GNVS+ KY FN+GS
Sbjct: 181 LEPGLVDRIEIANRSVAKVYVRSSPRKTVQKEDDVPQVHDYGKPGTGNVSRYKYSFNVGS 240

Query: 537 VDTFEEKLEEAQDALGIDPHNYVPVTYVSEMDWFVELMRFAPTALLLGSLWYMGKRLQXX 716
           V+ FEEKLEEAQ +LGIDPH++VPV YV +++WF EL+RFAPTALLLG+L++MG+R+Q  
Sbjct: 241 VELFEEKLEEAQKSLGIDPHDFVPVVYVHQVNWFQELLRFAPTALLLGTLYFMGRRMQGG 300

Query: 717 XXXXXXXXXXXXXIFNMGKANVTKLDKNAKNKVFFKDVAGCDEAKQEIMEVVHFLK 884
                        IFN+GKA +TK+DKNAKNKV+FKDVAGCDEAKQEIME VHFLK
Sbjct: 301 LGVGGPGGRGGRGIFNIGKAQITKIDKNAKNKVYFKDVAGCDEAKQEIMEFVHFLK 356


>ref|XP_004142062.1| PREDICTED: ATP-dependent zinc metalloprotease FTSH 10,
           mitochondrial-like [Cucumis sativus]
          Length = 824

 Score =  269 bits (687), Expect = 7e-70
 Identities = 145/296 (48%), Positives = 189/296 (63%), Gaps = 2/296 (0%)
 Frame = +3

Query: 3   SIGAGSGRQILSPTYLSELDSVFKNPRLRRLFCSKAPKRRNYENYFXXXXXXXXXXXXXX 182
           S G G+G+Q++S  YL  ++    NPR+RRLF S +P ++NYENY+              
Sbjct: 65  STGVGAGKQLVSRKYLDNVNYFLANPRVRRLFSSGSPNKKNYENYYPKDQKEIPKAKDQK 124

Query: 183 XXXXXXXXXXXHGNYRENM-KQYQNVLTPLMFIGFVL-SFIVMGPREQKQISFQEFKNQL 356
                      H + +E   KQ+Q+++  ++F G +L SF+  G  EQKQISFQEF+N+L
Sbjct: 125 TNSKDSNSG--HTDSQEKFTKQFQDLM--ILFFGCILASFVFDGSNEQKQISFQEFRNEL 180

Query: 357 LEPGLVDHIXXXXXXXXXXXXXXXXXTTNETNDESIQSPINGSRGKGNVSQCKYFFNIGS 536
           LEPGLVD I                  T +  D+  Q    G  G GNVS+ KY FN+GS
Sbjct: 181 LEPGLVDRIEIANRSVAKVYVRSSPRKTVQKEDDVPQVHDYGKPGTGNVSRYKYSFNVGS 240

Query: 537 VDTFEEKLEEAQDALGIDPHNYVPVTYVSEMDWFVELMRFAPTALLLGSLWYMGKRLQXX 716
           V+ FEEKLEEAQ +LGIDPH++VPV YV +++WF EL+RFAPTALLLG+L++MG+R+Q  
Sbjct: 241 VELFEEKLEEAQKSLGIDPHDFVPVVYVHQVNWFQELLRFAPTALLLGTLYFMGRRMQGG 300

Query: 717 XXXXXXXXXXXXXIFNMGKANVTKLDKNAKNKVFFKDVAGCDEAKQEIMEVVHFLK 884
                        IFN+GKA +TK+DKNAKNKV+FKDVAGCDEAKQEIME VHFLK
Sbjct: 301 LGVGGPGGRGGRGIFNIGKAQITKIDKNAKNKVYFKDVAGCDEAKQEIMEFVHFLK 356


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