BLASTX nr result

ID: Panax21_contig00004936 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004936
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313120.1| predicted protein [Populus trichocarpa] gi|2...   100   6e-33
ref|XP_002869179.1| hypothetical protein ARALYDRAFT_328341 [Arab...   104   2e-32
ref|XP_004136976.1| PREDICTED: methylcrotonoyl-CoA carboxylase b...   102   2e-32
gb|AAK62371.1|AF386926_1 Unknown protein [Arabidopsis thaliana]       103   2e-32
emb|CAN64992.1| hypothetical protein VITISV_001775 [Vitis vinifera]   103   2e-32

>ref|XP_002313120.1| predicted protein [Populus trichocarpa] gi|222849528|gb|EEE87075.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 99.8 bits (247), Expect(2) = 6e-33
 Identities = 46/54 (85%), Positives = 51/54 (94%)
 Frame = -2

Query: 164 PRERIDRLLDPGSSFLELSQLAGYELYKEPLPSGGIVTGIGAVHGKLCMFVAND 3
           PRERID+L+DPGSSFLELSQLAG+ELY E LPSGGI+TGIG VHG+LCMFVAND
Sbjct: 88  PRERIDKLIDPGSSFLELSQLAGHELYGETLPSGGIITGIGPVHGRLCMFVAND 141



 Score = 66.2 bits (160), Expect(2) = 6e-33
 Identities = 31/41 (75%), Positives = 36/41 (87%)
 Frame = -3

Query: 361 FSRNSEIMEALISQLQSHINKIMEGGGAEAVKRNRSRNKLL 239
           F++NS+ ME LISQLQSHINK++ GGG EAVKRNR RNKLL
Sbjct: 47  FAQNSKAMEGLISQLQSHINKVLAGGGEEAVKRNRKRNKLL 87


>ref|XP_002869179.1| hypothetical protein ARALYDRAFT_328341 [Arabidopsis lyrata subsp.
           lyrata] gi|297315015|gb|EFH45438.1| hypothetical protein
           ARALYDRAFT_328341 [Arabidopsis lyrata subsp. lyrata]
          Length = 626

 Score =  104 bits (259), Expect(2) = 2e-32
 Identities = 47/54 (87%), Positives = 53/54 (98%)
 Frame = -2

Query: 164 PRERIDRLLDPGSSFLELSQLAGYELYKEPLPSGGIVTGIGAVHGKLCMFVAND 3
           PRERIDRLLDPGSSFLELSQLAG+ELY+EPLPSGGI+TGIG +HG+LCMF+AND
Sbjct: 102 PRERIDRLLDPGSSFLELSQLAGHELYEEPLPSGGIITGIGPIHGRLCMFMAND 155



 Score = 60.1 bits (144), Expect(2) = 2e-32
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -3

Query: 361 FSRNSEIMEALISQLQSHINKIMEGGGAEAVKRNRSRNKLL 239
           FS NS  ME ++S+L+SHI K++ GGG EAVKRNRSRNKLL
Sbjct: 61  FSSNSIAMEGILSELRSHIKKVLAGGGEEAVKRNRSRNKLL 101


>ref|XP_004136976.1| PREDICTED: methylcrotonoyl-CoA carboxylase beta chain,
           mitochondrial-like [Cucumis sativus]
          Length = 577

 Score =  102 bits (255), Expect(2) = 2e-32
 Identities = 48/54 (88%), Positives = 51/54 (94%)
 Frame = -2

Query: 164 PRERIDRLLDPGSSFLELSQLAGYELYKEPLPSGGIVTGIGAVHGKLCMFVAND 3
           PRERIDRLLDPGSSFLELSQLAG+ELY EPLPS GI+TGIG VHG+LCMFVAND
Sbjct: 92  PRERIDRLLDPGSSFLELSQLAGHELYDEPLPSAGIITGIGPVHGRLCMFVAND 145



 Score = 61.6 bits (148), Expect(2) = 2e-32
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = -3

Query: 361 FSRNSEIMEALISQLQSHINKIMEGGGAEAVKRNRSRNKLL 239
           F+RNS  M+  IS+L+SHINK++ GGG EAVKRN+SRNKLL
Sbjct: 51  FARNSGAMDGFISELRSHINKVLAGGGPEAVKRNKSRNKLL 91


>gb|AAK62371.1|AF386926_1 Unknown protein [Arabidopsis thaliana]
          Length = 587

 Score =  103 bits (258), Expect(2) = 2e-32
 Identities = 46/54 (85%), Positives = 53/54 (98%)
 Frame = -2

Query: 164 PRERIDRLLDPGSSFLELSQLAGYELYKEPLPSGGIVTGIGAVHGKLCMFVAND 3
           PRERIDRLLDPGSSFLELSQLAG+ELY+EPLPSGGI+TGIG +HG++CMF+AND
Sbjct: 102 PRERIDRLLDPGSSFLELSQLAGHELYEEPLPSGGIITGIGTIHGRICMFMAND 155



 Score = 60.1 bits (144), Expect(2) = 2e-32
 Identities = 28/41 (68%), Positives = 34/41 (82%)
 Frame = -3

Query: 361 FSRNSEIMEALISQLQSHINKIMEGGGAEAVKRNRSRNKLL 239
           FS NS  ME ++S+L+SHI K++ GGG EAVKRNRSRNKLL
Sbjct: 61  FSSNSIAMEGILSELRSHIKKVLAGGGEEAVKRNRSRNKLL 101


>emb|CAN64992.1| hypothetical protein VITISV_001775 [Vitis vinifera]
          Length = 570

 Score =  103 bits (257), Expect(2) = 2e-32
 Identities = 48/54 (88%), Positives = 52/54 (96%)
 Frame = -2

Query: 164 PRERIDRLLDPGSSFLELSQLAGYELYKEPLPSGGIVTGIGAVHGKLCMFVAND 3
           PRERIDRLLDPGSSFLELSQLAG+ELY+EPLPS GI+TGIG VHG+LCMFVAND
Sbjct: 84  PRERIDRLLDPGSSFLELSQLAGHELYEEPLPSAGIITGIGPVHGRLCMFVAND 137



 Score = 60.5 bits (145), Expect(2) = 2e-32
 Identities = 28/41 (68%), Positives = 35/41 (85%)
 Frame = -3

Query: 361 FSRNSEIMEALISQLQSHINKIMEGGGAEAVKRNRSRNKLL 239
           FS+NS IM   ISQL+SH+ K++ GGGAE+V+RNRSRNKLL
Sbjct: 43  FSQNSAIMNDYISQLKSHVQKVLGGGGAESVRRNRSRNKLL 83


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