BLASTX nr result

ID: Panax21_contig00004926 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004926
         (1251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281875.1| PREDICTED: putative uridine kinase C227.14 [...   278   3e-72
ref|XP_002520981.1| ATP binding protein, putative [Ricinus commu...   274   4e-71
ref|XP_002306820.1| predicted protein [Populus trichocarpa] gi|2...   272   1e-70
ref|XP_004143866.1| PREDICTED: putative uridine kinase C227.14-l...   270   4e-70
ref|NP_171802.2| P-loop containing nucleoside triphosphate hydro...   270   6e-70

>ref|XP_002281875.1| PREDICTED: putative uridine kinase C227.14 [Vitis vinifera]
           gi|297735493|emb|CBI17933.3| unnamed protein product
           [Vitis vinifera]
          Length = 312

 Score =  278 bits (710), Expect = 3e-72
 Identities = 126/160 (78%), Positives = 147/160 (91%)
 Frame = -3

Query: 481 RKIVGIAGPPGSGKSTIASEVARRINKLWPQKSYTFDSQVEPPVVTAVIPMDGFHLYRHQ 302
           ++IVG+AGPPG+GKST+ASEVA R+NKLWPQK+ +FDSQV PP V AV+PMDGFHLYRHQ
Sbjct: 106 KRIVGLAGPPGAGKSTLASEVAWRVNKLWPQKASSFDSQVGPPDVAAVLPMDGFHLYRHQ 165

Query: 301 LDAMEDPEEAHARRGAPWTFDPELFLKCLKTLRDHGSVYAPSFDHGVGDPIKDDIYVNLQ 122
           LDAMEDPEEAHARRGAPWTFDP   L CLK LR  GSVYAPSFDHGVGDP++DDI+++LQ
Sbjct: 166 LDAMEDPEEAHARRGAPWTFDPTRLLTCLKRLRHEGSVYAPSFDHGVGDPVEDDIFISLQ 225

Query: 121 HKVVIVEGNYLLLEDGVWKEISTMFDEKWFIEVDIDTAMQ 2
           HKVVIVEGNYLLL++G WKE+S+MFDEKWFIEVDI+T+M+
Sbjct: 226 HKVVIVEGNYLLLQEGDWKEVSSMFDEKWFIEVDINTSME 265



 Score = 92.0 bits (227), Expect = 3e-16
 Identities = 51/106 (48%), Positives = 68/106 (64%), Gaps = 2/106 (1%)
 Frame = -3

Query: 1075 MDVSSFSASSRGCLTPPSGS--LLLKKIGLAECYRGSVSIFPVKCSSSPLSSHNTFLIQM 902
            M+V+SFS SS+G  +  S S   LL+K+ +   YR SV   P + S  PL          
Sbjct: 1    MEVASFSTSSQGFWSSSSSSELFLLRKVKVPITYRCSVLNSPTRRSVQPLFGGTRSQFGR 60

Query: 901  TNCMQVSCSQKSEISVIEARCMDEIYDTLAKRLVPTAAAATNSSFK 764
             +C++VSCSQK EI V++ RCMDEIYDTLA+RL+PTAA A+N + K
Sbjct: 61   ESCLKVSCSQKGEIPVVDGRCMDEIYDTLAERLLPTAAVASNPNLK 106


>ref|XP_002520981.1| ATP binding protein, putative [Ricinus communis]
           gi|223539818|gb|EEF41398.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 312

 Score =  274 bits (700), Expect = 4e-71
 Identities = 123/160 (76%), Positives = 147/160 (91%)
 Frame = -3

Query: 481 RKIVGIAGPPGSGKSTIASEVARRINKLWPQKSYTFDSQVEPPVVTAVIPMDGFHLYRHQ 302
           + IVG+AGPPG+GKSTIASEV RR+NK+WPQK+ +FDSQV+PP V AV+PMDGFHLYR Q
Sbjct: 106 KHIVGLAGPPGAGKSTIASEVVRRVNKIWPQKASSFDSQVKPPDVAAVLPMDGFHLYRSQ 165

Query: 301 LDAMEDPEEAHARRGAPWTFDPELFLKCLKTLRDHGSVYAPSFDHGVGDPIKDDIYVNLQ 122
           LDAME+P+EAHARRGAPWTF P L L+CLK LR+ GSVYAPSFDHGVGDP++DDI+V+LQ
Sbjct: 166 LDAMENPDEAHARRGAPWTFSPTLLLECLKKLRNEGSVYAPSFDHGVGDPVEDDIFVSLQ 225

Query: 121 HKVVIVEGNYLLLEDGVWKEISTMFDEKWFIEVDIDTAMQ 2
           HKV+IVEGNYLLL +G WK+IS+MFDEKW+I+VDIDTAM+
Sbjct: 226 HKVIIVEGNYLLLGEGAWKDISSMFDEKWYIDVDIDTAME 265



 Score = 71.6 bits (174), Expect = 4e-10
 Identities = 45/106 (42%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
 Frame = -3

Query: 1075 MDVSSFSASSRGC-LTPPSGSLLLKKIGLAECYRGSVSIFPVKCSSSPLSSHNTF-LIQM 902
            M+VSS S +SR C  +P + SLLLK+I     ++  VSI   K +S  L S  T   +  
Sbjct: 1    MEVSSLSITSRACPFSPATESLLLKRIRRPSLHQCLVSISLNKRTSQSLFSRQTGPTVFK 60

Query: 901  TNCMQVSCSQKSEISVIEARCMDEIYDTLAKRLVPTAAAATNSSFK 764
             N ++V CS + ++ V+EA  M EIYD LA+R++P AAAA+N + K
Sbjct: 61   ENSIKVLCSLRRDVPVVEASSMGEIYDALAERILPAAAAASNPNLK 106


>ref|XP_002306820.1| predicted protein [Populus trichocarpa] gi|222856269|gb|EEE93816.1|
           predicted protein [Populus trichocarpa]
          Length = 231

 Score =  272 bits (695), Expect = 1e-70
 Identities = 122/158 (77%), Positives = 144/158 (91%)
 Frame = -3

Query: 475 IVGIAGPPGSGKSTIASEVARRINKLWPQKSYTFDSQVEPPVVTAVIPMDGFHLYRHQLD 296
           IV +AGPPG+GKST+ASE+  R+N+LWPQK+ +FD QV+PP V AV+PMDGFHLYR QLD
Sbjct: 27  IVALAGPPGAGKSTLASEIVHRVNRLWPQKASSFDLQVKPPDVAAVLPMDGFHLYRSQLD 86

Query: 295 AMEDPEEAHARRGAPWTFDPELFLKCLKTLRDHGSVYAPSFDHGVGDPIKDDIYVNLQHK 116
           AME+PEEAHARRGAPWTF P L L+CL+ LR+ GSVYAPSFDHGVGDP++DDI+V+LQHK
Sbjct: 87  AMENPEEAHARRGAPWTFSPTLLLRCLEKLRNEGSVYAPSFDHGVGDPVEDDIFVSLQHK 146

Query: 115 VVIVEGNYLLLEDGVWKEISTMFDEKWFIEVDIDTAMQ 2
           VVIVEGNYLLLEDG WK++S+MFDEKWFI+VDIDTAMQ
Sbjct: 147 VVIVEGNYLLLEDGAWKDVSSMFDEKWFIDVDIDTAMQ 184


>ref|XP_004143866.1| PREDICTED: putative uridine kinase C227.14-like [Cucumis sativus]
          Length = 309

 Score =  270 bits (691), Expect = 4e-70
 Identities = 122/158 (77%), Positives = 144/158 (91%)
 Frame = -3

Query: 475 IVGIAGPPGSGKSTIASEVARRINKLWPQKSYTFDSQVEPPVVTAVIPMDGFHLYRHQLD 296
           IVG+AGPPG+GK+TIASEV +R+NKLWPQK+ + DSQV P  V AV+PMDGFHLYR QLD
Sbjct: 105 IVGLAGPPGAGKTTIASEVVQRLNKLWPQKASSMDSQVNPADVAAVLPMDGFHLYRSQLD 164

Query: 295 AMEDPEEAHARRGAPWTFDPELFLKCLKTLRDHGSVYAPSFDHGVGDPIKDDIYVNLQHK 116
           +ME+PEEAHARRGAPWTF+P+L L CLKTLR  GSVYAPSFDHGVGDP++DDI+V LQHK
Sbjct: 165 SMENPEEAHARRGAPWTFNPQLLLTCLKTLRSQGSVYAPSFDHGVGDPVEDDIFVGLQHK 224

Query: 115 VVIVEGNYLLLEDGVWKEISTMFDEKWFIEVDIDTAMQ 2
           VVIVEGNYLLL+DGVWKEIS++FDEKWF+E+DID +M+
Sbjct: 225 VVIVEGNYLLLDDGVWKEISSIFDEKWFVEIDIDKSME 262



 Score = 61.2 bits (147), Expect = 5e-07
 Identities = 27/44 (61%), Positives = 35/44 (79%)
 Frame = -3

Query: 895 CMQVSCSQKSEISVIEARCMDEIYDTLAKRLVPTAAAATNSSFK 764
           C+ V CSQK E SV+E RC+D+IYD LA+RL+PTAAAA++   K
Sbjct: 60  CVTVFCSQKREFSVVEGRCIDDIYDDLARRLLPTAAAASDPDLK 103


>ref|NP_171802.2| P-loop containing nucleoside triphosphate hydrolase-like protein
           [Arabidopsis thaliana] gi|63147412|gb|AAY34179.1|
           At1g03030 [Arabidopsis thaliana]
           gi|108385285|gb|ABF85769.1| At1g03030 [Arabidopsis
           thaliana] gi|110737366|dbj|BAF00628.1| hypothetical
           protein [Arabidopsis thaliana]
           gi|332189396|gb|AEE27517.1| P-loop containing nucleoside
           triphosphate hydrolase-like protein [Arabidopsis
           thaliana]
          Length = 301

 Score =  270 bits (690), Expect = 6e-70
 Identities = 119/160 (74%), Positives = 145/160 (90%)
 Frame = -3

Query: 481 RKIVGIAGPPGSGKSTIASEVARRINKLWPQKSYTFDSQVEPPVVTAVIPMDGFHLYRHQ 302
           +++VG+AGPPG+GKST+A+EV RR+NKLWPQK+ +FD++V PP V  V+PMDGFHLYR Q
Sbjct: 95  KRLVGLAGPPGAGKSTVANEVVRRVNKLWPQKAASFDAEVNPPDVAIVLPMDGFHLYRSQ 154

Query: 301 LDAMEDPEEAHARRGAPWTFDPELFLKCLKTLRDHGSVYAPSFDHGVGDPIKDDIYVNLQ 122
           LDAMEDP+EAHARRGAPWTFDP L L CLK L++ GSVY PSFDHGVGDP++DDI+V+LQ
Sbjct: 155 LDAMEDPKEAHARRGAPWTFDPALLLNCLKKLKNEGSVYVPSFDHGVGDPVEDDIFVSLQ 214

Query: 121 HKVVIVEGNYLLLEDGVWKEISTMFDEKWFIEVDIDTAMQ 2
           HKVVIVEGNY+LLE+G WK+IS MFDEKWFI+V++DTAMQ
Sbjct: 215 HKVVIVEGNYILLEEGSWKDISDMFDEKWFIDVNLDTAMQ 254



 Score = 57.8 bits (138), Expect = 6e-06
 Identities = 39/104 (37%), Positives = 56/104 (53%)
 Frame = -3

Query: 1075 MDVSSFSASSRGCLTPPSGSLLLKKIGLAECYRGSVSIFPVKCSSSPLSSHNTFLIQMTN 896
            M+VSSFS   R C +      L +  G  + +    S+ P+  S     +   +LI    
Sbjct: 1    MEVSSFSTVPRYCNSRSFVPELSRFRGF-KVHLWDQSLVPLHFSIRKRKNTPRYLI---- 55

Query: 895  CMQVSCSQKSEISVIEARCMDEIYDTLAKRLVPTAAAATNSSFK 764
                SCSQK +++V++  CMDEIYD LA+RLVPTAAA  + + K
Sbjct: 56   ----SCSQKKDVTVVDGSCMDEIYDKLAERLVPTAAAMFSPNLK 95


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