BLASTX nr result
ID: Panax21_contig00004920
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00004920 (978 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250... 91 7e-18 emb|CBI20169.3| unnamed protein product [Vitis vinifera] 91 7e-18 gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l... 58 3e-06 >ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250468 [Vitis vinifera] Length = 524 Score = 90.5 bits (223), Expect(2) = 7e-18 Identities = 67/180 (37%), Positives = 78/180 (43%) Frame = -1 Query: 978 GEANRKRRVVFDFSDEEDEYKDVVXXXXXXXXXXXXXXXXKQCSKASVVEKISLNFNXXX 799 G+ RKRRVVFDFSDEE+E++D V KQ K V +KI+LN + Sbjct: 306 GDGGRKRRVVFDFSDEEEEFEDAVNLASPDPPKGKSCIVSKQSPKPLVPDKINLNSDQQK 365 Query: 798 XXXXXXXXXKYIRTESNQLLREESLDVSKGKNNGIXXXXXXXXXXSETDACTKDKLTGAA 619 K ESN RE+S +SKGKNNGI E D KDK+ Sbjct: 366 QDKPKVKEEKSSNRESNLSPREDSSVLSKGKNNGISSSDKIAGGVPEIDVNKKDKV---- 421 Query: 618 LKSSSIVTXXXXXXXXXXXXIQSCIPEEGADAKDKVTDAAPNSPKRRKVLKTRIDECGRE 439 TDAAPNSPKRRKV+KTRIDE GRE Sbjct: 422 ------------------------------------TDAAPNSPKRRKVMKTRIDERGRE 445 Score = 26.9 bits (58), Expect(2) = 7e-18 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -3 Query: 439 RPPAAKKSPTVGAVAPS 389 R P AKKSP VG APS Sbjct: 479 RAPPAKKSPAVGNTAPS 495 >emb|CBI20169.3| unnamed protein product [Vitis vinifera] Length = 477 Score = 90.5 bits (223), Expect(2) = 7e-18 Identities = 67/180 (37%), Positives = 78/180 (43%) Frame = -1 Query: 978 GEANRKRRVVFDFSDEEDEYKDVVXXXXXXXXXXXXXXXXKQCSKASVVEKISLNFNXXX 799 G+ RKRRVVFDFSDEE+E++D V KQ K V +KI+LN + Sbjct: 259 GDGGRKRRVVFDFSDEEEEFEDAVNLASPDPPKGKSCIVSKQSPKPLVPDKINLNSDQQK 318 Query: 798 XXXXXXXXXKYIRTESNQLLREESLDVSKGKNNGIXXXXXXXXXXSETDACTKDKLTGAA 619 K ESN RE+S +SKGKNNGI E D KDK+ Sbjct: 319 QDKPKVKEEKSSNRESNLSPREDSSVLSKGKNNGISSSDKIAGGVPEIDVNKKDKV---- 374 Query: 618 LKSSSIVTXXXXXXXXXXXXIQSCIPEEGADAKDKVTDAAPNSPKRRKVLKTRIDECGRE 439 TDAAPNSPKRRKV+KTRIDE GRE Sbjct: 375 ------------------------------------TDAAPNSPKRRKVMKTRIDERGRE 398 Score = 26.9 bits (58), Expect(2) = 7e-18 Identities = 12/17 (70%), Positives = 12/17 (70%) Frame = -3 Query: 439 RPPAAKKSPTVGAVAPS 389 R P AKKSP VG APS Sbjct: 432 RAPPAKKSPAVGNTAPS 448 >gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum] Length = 1561 Score = 58.2 bits (139), Expect = 3e-06 Identities = 24/39 (61%), Positives = 33/39 (84%) Frame = -3 Query: 163 RCIYAIPNGSMFQNDTVTKLEGDVEESKISPTTFRTKLH 47 RC+YA+PNGS+F DT++KL DVEES+ISP+ F ++LH Sbjct: 419 RCVYAVPNGSVFCGDTISKLSRDVEESQISPSAFLSQLH 457