BLASTX nr result

ID: Panax21_contig00004920 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004920
         (978 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250...    91   7e-18
emb|CBI20169.3| unnamed protein product [Vitis vinifera]               91   7e-18
gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...    58   3e-06

>ref|XP_002283370.1| PREDICTED: uncharacterized protein LOC100250468 [Vitis vinifera]
          Length = 524

 Score = 90.5 bits (223), Expect(2) = 7e-18
 Identities = 67/180 (37%), Positives = 78/180 (43%)
 Frame = -1

Query: 978 GEANRKRRVVFDFSDEEDEYKDVVXXXXXXXXXXXXXXXXKQCSKASVVEKISLNFNXXX 799
           G+  RKRRVVFDFSDEE+E++D V                KQ  K  V +KI+LN +   
Sbjct: 306 GDGGRKRRVVFDFSDEEEEFEDAVNLASPDPPKGKSCIVSKQSPKPLVPDKINLNSDQQK 365

Query: 798 XXXXXXXXXKYIRTESNQLLREESLDVSKGKNNGIXXXXXXXXXXSETDACTKDKLTGAA 619
                    K    ESN   RE+S  +SKGKNNGI           E D   KDK+    
Sbjct: 366 QDKPKVKEEKSSNRESNLSPREDSSVLSKGKNNGISSSDKIAGGVPEIDVNKKDKV---- 421

Query: 618 LKSSSIVTXXXXXXXXXXXXIQSCIPEEGADAKDKVTDAAPNSPKRRKVLKTRIDECGRE 439
                                               TDAAPNSPKRRKV+KTRIDE GRE
Sbjct: 422 ------------------------------------TDAAPNSPKRRKVMKTRIDERGRE 445



 Score = 26.9 bits (58), Expect(2) = 7e-18
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -3

Query: 439 RPPAAKKSPTVGAVAPS 389
           R P AKKSP VG  APS
Sbjct: 479 RAPPAKKSPAVGNTAPS 495


>emb|CBI20169.3| unnamed protein product [Vitis vinifera]
          Length = 477

 Score = 90.5 bits (223), Expect(2) = 7e-18
 Identities = 67/180 (37%), Positives = 78/180 (43%)
 Frame = -1

Query: 978 GEANRKRRVVFDFSDEEDEYKDVVXXXXXXXXXXXXXXXXKQCSKASVVEKISLNFNXXX 799
           G+  RKRRVVFDFSDEE+E++D V                KQ  K  V +KI+LN +   
Sbjct: 259 GDGGRKRRVVFDFSDEEEEFEDAVNLASPDPPKGKSCIVSKQSPKPLVPDKINLNSDQQK 318

Query: 798 XXXXXXXXXKYIRTESNQLLREESLDVSKGKNNGIXXXXXXXXXXSETDACTKDKLTGAA 619
                    K    ESN   RE+S  +SKGKNNGI           E D   KDK+    
Sbjct: 319 QDKPKVKEEKSSNRESNLSPREDSSVLSKGKNNGISSSDKIAGGVPEIDVNKKDKV---- 374

Query: 618 LKSSSIVTXXXXXXXXXXXXIQSCIPEEGADAKDKVTDAAPNSPKRRKVLKTRIDECGRE 439
                                               TDAAPNSPKRRKV+KTRIDE GRE
Sbjct: 375 ------------------------------------TDAAPNSPKRRKVMKTRIDERGRE 398



 Score = 26.9 bits (58), Expect(2) = 7e-18
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -3

Query: 439 RPPAAKKSPTVGAVAPS 389
           R P AKKSP VG  APS
Sbjct: 432 RAPPAKKSPAVGNTAPS 448


>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 24/39 (61%), Positives = 33/39 (84%)
 Frame = -3

Query: 163 RCIYAIPNGSMFQNDTVTKLEGDVEESKISPTTFRTKLH 47
           RC+YA+PNGS+F  DT++KL  DVEES+ISP+ F ++LH
Sbjct: 419 RCVYAVPNGSVFCGDTISKLSRDVEESQISPSAFLSQLH 457


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