BLASTX nr result

ID: Panax21_contig00004900 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004900
         (1468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633697.1| PREDICTED: uncharacterized protein LOC100263...   491   e-136
emb|CBI22317.3| unnamed protein product [Vitis vinifera]              491   e-136
ref|XP_002268541.2| PREDICTED: ribosome production factor 1-like...   490   e-136
ref|XP_002302686.1| predicted protein [Populus trichocarpa] gi|2...   489   e-136
ref|XP_003548006.1| PREDICTED: LOW QUALITY PROTEIN: ribosome pro...   486   e-135

>ref|XP_003633697.1| PREDICTED: uncharacterized protein LOC100263155 [Vitis vinifera]
          Length = 801

 Score =  491 bits (1265), Expect = e-136
 Identities = 247/355 (69%), Positives = 271/355 (76%)
 Frame = +1

Query: 52   MAAKRRKDDSDGREEEITRKEEXXXXXXXXXXLLASTIKNKEKRSAVHXXXXXXXXXXXX 231
            M AKR+K +  G ++E+   ++          +L S IKNK+KRSAVH            
Sbjct: 456  MGAKRKKREEVGGDDEVAGGKKQ---------ILPSMIKNKDKRSAVHAKLKHQKKIEKR 506

Query: 232  XXXXXXXXXXXXXXXXXXXXPPKKVPRTIENTRELDETVCKPDDEELFAGNDADEFSSVL 411
                                P K +PRTIENTRE DETVCKPDDEELFAGNDADEFSS+L
Sbjct: 507  KKAKAREAAEKRALELGEEPPVKAIPRTIENTREFDETVCKPDDEELFAGNDADEFSSIL 566

Query: 412  NLEHTPKILITTCRFNSTRGPAFISDLLSVIPNAHYYKRGTYDLKKIVEYARNKDFTSVI 591
            N +  PKILITTCRFNSTRGPAFIS+LLSVIPNAHYYKRGTYDLKKIVEYA+ KDFTS+I
Sbjct: 567  NRKSDPKILITTCRFNSTRGPAFISELLSVIPNAHYYKRGTYDLKKIVEYAKIKDFTSLI 626

Query: 592  VVHTNRREPDALLVIGLPDGPTAHFKLSKLILHKDIKNHGNPTSHKPELVLNNFTTRLGH 771
            VVHTNRREPDALL+IGLPDGPTAHFKLSKL+LHKD+KNHGNPTSH PELVLNNFTTRLGH
Sbjct: 627  VVHTNRREPDALLIIGLPDGPTAHFKLSKLVLHKDVKNHGNPTSHIPELVLNNFTTRLGH 686

Query: 772  RIGRLIQSLFPQDPNFHGRRVVTFHNQRDFIFFRHHRYIFENXXXXXXXXXXXXXXXXXX 951
            RIGR+IQSLFPQ PNF GRRVVTFHNQRDFIFFRHHRYIFE+                  
Sbjct: 687  RIGRMIQSLFPQAPNFRGRRVVTFHNQRDFIFFRHHRYIFESKESKQGDTKGNKDKDAKG 746

Query: 952  XXVSQERVIARLQECGPRFTLKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 1116
               SQ +V+ARLQECGPRFTLKLI+LQHGTFD+KGGEYEWVHKPEMDTSRRRFFL
Sbjct: 747  EKSSQGKVVARLQECGPRFTLKLINLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 801


>emb|CBI22317.3| unnamed protein product [Vitis vinifera]
          Length = 346

 Score =  491 bits (1265), Expect = e-136
 Identities = 247/355 (69%), Positives = 271/355 (76%)
 Frame = +1

Query: 52   MAAKRRKDDSDGREEEITRKEEXXXXXXXXXXLLASTIKNKEKRSAVHXXXXXXXXXXXX 231
            M AKR+K +  G ++E+   ++          +L S IKNK+KRSAVH            
Sbjct: 1    MGAKRKKREEVGGDDEVAGGKKQ---------ILPSMIKNKDKRSAVHAKLKHQKKIEKR 51

Query: 232  XXXXXXXXXXXXXXXXXXXXPPKKVPRTIENTRELDETVCKPDDEELFAGNDADEFSSVL 411
                                P K +PRTIENTRE DETVCKPDDEELFAGNDADEFSS+L
Sbjct: 52   KKAKAREAAEKRALELGEEPPVKAIPRTIENTREFDETVCKPDDEELFAGNDADEFSSIL 111

Query: 412  NLEHTPKILITTCRFNSTRGPAFISDLLSVIPNAHYYKRGTYDLKKIVEYARNKDFTSVI 591
            N +  PKILITTCRFNSTRGPAFIS+LLSVIPNAHYYKRGTYDLKKIVEYA+ KDFTS+I
Sbjct: 112  NRKSDPKILITTCRFNSTRGPAFISELLSVIPNAHYYKRGTYDLKKIVEYAKIKDFTSLI 171

Query: 592  VVHTNRREPDALLVIGLPDGPTAHFKLSKLILHKDIKNHGNPTSHKPELVLNNFTTRLGH 771
            VVHTNRREPDALL+IGLPDGPTAHFKLSKL+LHKD+KNHGNPTSH PELVLNNFTTRLGH
Sbjct: 172  VVHTNRREPDALLIIGLPDGPTAHFKLSKLVLHKDVKNHGNPTSHIPELVLNNFTTRLGH 231

Query: 772  RIGRLIQSLFPQDPNFHGRRVVTFHNQRDFIFFRHHRYIFENXXXXXXXXXXXXXXXXXX 951
            RIGR+IQSLFPQ PNF GRRVVTFHNQRDFIFFRHHRYIFE+                  
Sbjct: 232  RIGRMIQSLFPQAPNFRGRRVVTFHNQRDFIFFRHHRYIFESKESKQGDTKGNKDKDAKG 291

Query: 952  XXVSQERVIARLQECGPRFTLKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 1116
               SQ +V+ARLQECGPRFTLKLI+LQHGTFD+KGGEYEWVHKPEMDTSRRRFFL
Sbjct: 292  EKSSQGKVVARLQECGPRFTLKLINLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 346


>ref|XP_002268541.2| PREDICTED: ribosome production factor 1-like [Vitis vinifera]
          Length = 346

 Score =  490 bits (1261), Expect = e-136
 Identities = 247/355 (69%), Positives = 270/355 (76%)
 Frame = +1

Query: 52   MAAKRRKDDSDGREEEITRKEEXXXXXXXXXXLLASTIKNKEKRSAVHXXXXXXXXXXXX 231
            M AKR+K +  G ++E+   ++          +L S IKNKEKRSAVH            
Sbjct: 1    MGAKRKKTEEVGGDDEVGGGKKQ---------ILPSMIKNKEKRSAVHAKLKHQKKIEKR 51

Query: 232  XXXXXXXXXXXXXXXXXXXXPPKKVPRTIENTRELDETVCKPDDEELFAGNDADEFSSVL 411
                                P KK+P TIENTRE DETVCKPDDEELFAGNDADEFSS+L
Sbjct: 52   KKAKAREAAEKRALELGEEPPAKKIPHTIENTREFDETVCKPDDEELFAGNDADEFSSIL 111

Query: 412  NLEHTPKILITTCRFNSTRGPAFISDLLSVIPNAHYYKRGTYDLKKIVEYARNKDFTSVI 591
            N +  PKILITTCRFNSTRGPAFIS+LLSVIPNAHYYKRGTYDLKKIVEYA+ KDFTS+I
Sbjct: 112  NRKSDPKILITTCRFNSTRGPAFISELLSVIPNAHYYKRGTYDLKKIVEYAKKKDFTSLI 171

Query: 592  VVHTNRREPDALLVIGLPDGPTAHFKLSKLILHKDIKNHGNPTSHKPELVLNNFTTRLGH 771
            VVHTNRREPDALL+IGLPDGPTAHFKLSKL+L KD+KNHGNPTSH PELVLNNFTTRLGH
Sbjct: 172  VVHTNRREPDALLIIGLPDGPTAHFKLSKLVLRKDVKNHGNPTSHIPELVLNNFTTRLGH 231

Query: 772  RIGRLIQSLFPQDPNFHGRRVVTFHNQRDFIFFRHHRYIFENXXXXXXXXXXXXXXXXXX 951
            RIGR+IQSLFPQ PNF GRRVVTFHNQRDFIFFRHHRYIFE+                  
Sbjct: 232  RIGRMIQSLFPQAPNFGGRRVVTFHNQRDFIFFRHHRYIFESKESKQGDSKGNKDKDAKG 291

Query: 952  XXVSQERVIARLQECGPRFTLKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 1116
               S+ +V+ARLQECGPRFTLKLISLQHGTFD+KGGEYEWVHKPEMDTSRRRFFL
Sbjct: 292  EKSSRGKVVARLQECGPRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 346


>ref|XP_002302686.1| predicted protein [Populus trichocarpa] gi|222844412|gb|EEE81959.1|
            predicted protein [Populus trichocarpa]
          Length = 361

 Score =  489 bits (1260), Expect = e-136
 Identities = 248/361 (68%), Positives = 271/361 (75%), Gaps = 6/361 (1%)
 Frame = +1

Query: 52   MAAKRRKDDSDGREE-----EITRKEEXXXXXXXXXX-LLASTIKNKEKRSAVHXXXXXX 213
            M  KRR  +S+  EE     E+ RKE+           +L S IKNKEKRSAVH      
Sbjct: 1    MGGKRRTSESEAMEEYGSDVELDRKEKKKKMEKGKTREILPSMIKNKEKRSAVHAKLKHE 60

Query: 214  XXXXXXXXXXXXXXXXXXXXXXXXXXPPKKVPRTIENTRELDETVCKPDDEELFAGNDAD 393
                                      PP+K+PRTIENTRE DETVCKPDDEELFAGNDAD
Sbjct: 61   KKVEKRKKLKARDAEEKRALELGEEPPPRKIPRTIENTRENDETVCKPDDEELFAGNDAD 120

Query: 394  EFSSVLNLEHTPKILITTCRFNSTRGPAFISDLLSVIPNAHYYKRGTYDLKKIVEYARNK 573
            EFSS+L  E TPKILITT RFNSTRGPAFIS+LL VIPNAHYYKRGTYDLKKIVEYA+ +
Sbjct: 121  EFSSILKRERTPKILITTSRFNSTRGPAFISELLQVIPNAHYYKRGTYDLKKIVEYAKKQ 180

Query: 574  DFTSVIVVHTNRREPDALLVIGLPDGPTAHFKLSKLILHKDIKNHGNPTSHKPELVLNNF 753
            DFTS+IVVHTNRREPDALL+IGLPDGPTAHFKLS+L+L KDIKNHGNPTSH+PELVL NF
Sbjct: 181  DFTSLIVVHTNRREPDALLIIGLPDGPTAHFKLSRLVLRKDIKNHGNPTSHEPELVLTNF 240

Query: 754  TTRLGHRIGRLIQSLFPQDPNFHGRRVVTFHNQRDFIFFRHHRYIFENXXXXXXXXXXXX 933
            TTRLGHR GR+IQSLFPQ+PNF GRRVVTFHNQRD+IFFRHHRYIFE             
Sbjct: 241  TTRLGHRAGRIIQSLFPQEPNFRGRRVVTFHNQRDYIFFRHHRYIFETKESKQSDSKGKK 300

Query: 934  XXXXXXXXVSQERVIARLQECGPRFTLKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFF 1113
                    +SQ++VIARLQECGPRFTLKL SLQHGTFD+KGGEYEWVHKPEMDTSRRRFF
Sbjct: 301  GKDGKGEKISQQKVIARLQECGPRFTLKLRSLQHGTFDTKGGEYEWVHKPEMDTSRRRFF 360

Query: 1114 L 1116
            L
Sbjct: 361  L 361


>ref|XP_003548006.1| PREDICTED: LOW QUALITY PROTEIN: ribosome production factor 1-like
            [Glycine max]
          Length = 354

 Score =  486 bits (1250), Expect = e-135
 Identities = 247/351 (70%), Positives = 266/351 (75%)
 Frame = +1

Query: 64   RRKDDSDGREEEITRKEEXXXXXXXXXXLLASTIKNKEKRSAVHXXXXXXXXXXXXXXXX 243
            RRK +   RE+E  +KE           L  S IKNKEKRS +H                
Sbjct: 16   RRKRERRRREKE--KKEP----------LRPSMIKNKEKRSELHAKLKQQKKLDKRAKAK 63

Query: 244  XXXXXXXXXXXXXXXXPPKKVPRTIENTRELDETVCKPDDEELFAGNDADEFSSVLNLEH 423
                            P KKVPRTIENTRELDETVCKPDD+ELFAGNDADEF S+LN + 
Sbjct: 64   ARDAALKRALDLGEEPPEKKVPRTIENTRELDETVCKPDDDELFAGNDADEFGSILNQQQ 123

Query: 424  TPKILITTCRFNSTRGPAFISDLLSVIPNAHYYKRGTYDLKKIVEYARNKDFTSVIVVHT 603
            TPKILITTCRF+STRGPAFIS+LLSVIPNAHY+KRGTYDLKKIVEYA+ KDFTSVIVVHT
Sbjct: 124  TPKILITTCRFHSTRGPAFISELLSVIPNAHYFKRGTYDLKKIVEYAKKKDFTSVIVVHT 183

Query: 604  NRREPDALLVIGLPDGPTAHFKLSKLILHKDIKNHGNPTSHKPELVLNNFTTRLGHRIGR 783
            NRREPDALL+IG+PDGPTAHFKLSKL+L KDIKNHGNPT HKPELVLNNFTTRLGHR+GR
Sbjct: 184  NRREPDALLIIGVPDGPTAHFKLSKLVLRKDIKNHGNPTGHKPELVLNNFTTRLGHRVGR 243

Query: 784  LIQSLFPQDPNFHGRRVVTFHNQRDFIFFRHHRYIFENXXXXXXXXXXXXXXXXXXXXVS 963
            LIQSLFPQDP F GRRVVTFHNQRDFIFFRHHRYIFE                     V 
Sbjct: 244  LIQSLFPQDPEFKGRRVVTFHNQRDFIFFRHHRYIFETKEVKKTESKGKKDKEGKSENVP 303

Query: 964  QERVIARLQECGPRFTLKLISLQHGTFDSKGGEYEWVHKPEMDTSRRRFFL 1116
            +++ IARLQECGPRFTLKLISLQHGTFD+KGGEYEWVHKPEMDTSRRRFFL
Sbjct: 304  EQKTIARLQECGPRFTLKLISLQHGTFDTKGGEYEWVHKPEMDTSRRRFFL 354


Top