BLASTX nr result

ID: Panax21_contig00004898 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004898
         (757 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002513943.1| conserved hypothetical protein [Ricinus comm...   317   2e-84
ref|XP_002285762.1| PREDICTED: uncharacterized protein LOC100259...   316   4e-84
ref|XP_003544803.1| PREDICTED: uncharacterized protein LOC100791...   312   4e-83
ref|XP_002513945.1| conserved hypothetical protein [Ricinus comm...   305   5e-81
ref|XP_003630473.1| Phi-1 protein [Medicago truncatula] gi|35552...   305   9e-81

>ref|XP_002513943.1| conserved hypothetical protein [Ricinus communis]
           gi|223547029|gb|EEF48526.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 317

 Score =  317 bits (812), Expect = 2e-84
 Identities = 160/243 (65%), Positives = 181/243 (74%), Gaps = 2/243 (0%)
 Frame = +3

Query: 33  SQMASSIIQTLFAIISLFHFTLEARTLNELFHDPSNLLQYHNGPLLSGKISVNLIWYGKF 212
           +  AS  +  LF +IS+F  +L AR LNEL  D   LL+YHNGPLLSGKIS+NLIWYGKF
Sbjct: 2   ASFASHCVLKLFILISIFQISLAARKLNELVQDQPQLLRYHNGPLLSGKISINLIWYGKF 61

Query: 213 KPSQRAIVSDFITXXXXXXXXXXXX-VGTWWKTTEKYYXXXXXXXXXXXXXNLGKQILVP 389
           +PSQ+AI+SDFI+             V +WWKTTEKYY              LGKQI+  
Sbjct: 62  QPSQKAIISDFISSLSEHQSQNSQPSVASWWKTTEKYYHLNSKKATLSL--TLGKQIVDE 119

Query: 390 NYSLGKSLTQHHIVQLSSKGEQKNAINVVLTAADVTVAGFCTSRCGTHGSSS-SKMGQIK 566
            YSLGKSLT  HIV+L+SKG++ NAINVVLT+ADV V GFC +RCGTHGS+S SK G IK
Sbjct: 120 AYSLGKSLTNEHIVELASKGDKMNAINVVLTSADVAVDGFCLNRCGTHGSASGSKTGHIK 179

Query: 567 GKNNKFAYIWVGNPETQCPGYCAWPFHQPIYGPQASPLVAPNNDVGLDGMIINLASLLAG 746
           GKN KFAYIWVGN E QCPGYCAWPFHQPIYGPQ  PLVAPNNDVGLDGM+INLA LLAG
Sbjct: 180 GKNYKFAYIWVGNSEIQCPGYCAWPFHQPIYGPQNQPLVAPNNDVGLDGMVINLAGLLAG 239

Query: 747 TAT 755
           TAT
Sbjct: 240 TAT 242


>ref|XP_002285762.1| PREDICTED: uncharacterized protein LOC100259041 [Vitis vinifera]
           gi|147765766|emb|CAN68978.1| hypothetical protein
           VITISV_040774 [Vitis vinifera]
          Length = 319

 Score =  316 bits (809), Expect = 4e-84
 Identities = 162/230 (70%), Positives = 177/230 (76%), Gaps = 2/230 (0%)
 Frame = +3

Query: 72  IISLFHFTLEARTLNELFHDPSNLLQYHNGPLLSGKISVNLIWYGKFKPSQRAIVSDFIT 251
           +ISLFH +  AR LNEL      LL+YHNGPLLSGKIS+NLIWYGKFKPSQRAIVSDFIT
Sbjct: 16  VISLFHVSYAARKLNELVQQQPLLLEYHNGPLLSGKISINLIWYGKFKPSQRAIVSDFIT 75

Query: 252 XXXXXXXXXXXX-VGTWWKTTEKYYXXXXXXXXXXXXXNLGKQILVPNYSLGKSLTQHHI 428
                        V TWWKTTEKYY             +LG+QIL   YSLGKSLT   I
Sbjct: 76  SLSSSSLSQDQPSVATWWKTTEKYYHLTSKNPSSLKL-SLGEQILDETYSLGKSLTGKQI 134

Query: 429 VQLSSKGEQKNAINVVLTAADVTVAGFCTSRCGTHGSSSS-KMGQIKGKNNKFAYIWVGN 605
           VQL+SKGEQ NAINVVLT++DV V GFC+SRCGTHGSSSS K  Q+KGKN KFAY+WVGN
Sbjct: 135 VQLASKGEQMNAINVVLTSSDVAVEGFCSSRCGTHGSSSSSKNVQVKGKNYKFAYVWVGN 194

Query: 606 PETQCPGYCAWPFHQPIYGPQASPLVAPNNDVGLDGMIINLASLLAGTAT 755
            ETQCPG CAWPFHQPIYGPQ+ PLVAPNNDVGLDG++INLASLLAGTAT
Sbjct: 195 SETQCPGQCAWPFHQPIYGPQSPPLVAPNNDVGLDGIVINLASLLAGTAT 244


>ref|XP_003544803.1| PREDICTED: uncharacterized protein LOC100791695 [Glycine max]
          Length = 313

 Score =  312 bits (800), Expect = 4e-83
 Identities = 157/239 (65%), Positives = 176/239 (73%), Gaps = 2/239 (0%)
 Frame = +3

Query: 45  SSIIQTLFAIISLFHFTLEARTLNELFHDPSNLLQYHNGPLLSGKISVNLIWYGKFKPSQ 224
           S+ +  +F +IS+F  +   R LNEL  D + LL+YHNGPLLSGKIS+NLIWYG FKPSQ
Sbjct: 2   STFMLKIFLLISIFQISFATRRLNELVQDQTQLLRYHNGPLLSGKISINLIWYGHFKPSQ 61

Query: 225 RAIVSDFITXXXXXXXXXXXX-VGTWWKTTEKYYXXXXXXXXXXXXX-NLGKQILVPNYS 398
           +AIVSDFIT             V TWWKTTEKYY               L KQIL  NYS
Sbjct: 62  KAIVSDFITSLSPSSPHSTQPSVATWWKTTEKYYHHLSNTKKTSPLSIPLNKQILDENYS 121

Query: 399 LGKSLTQHHIVQLSSKGEQKNAINVVLTAADVTVAGFCTSRCGTHGSSSSKMGQIKGKNN 578
           LGKSLT  H++QL+SKG+ KNAINVVLT+ADV V GFCTSRCGTHGSSS+  G  K KN 
Sbjct: 122 LGKSLTSKHLIQLASKGDHKNAINVVLTSADVAVEGFCTSRCGTHGSSSA--GHAKNKNY 179

Query: 579 KFAYIWVGNPETQCPGYCAWPFHQPIYGPQASPLVAPNNDVGLDGMIINLASLLAGTAT 755
           KFAYIWVGN E QCPG CAWPFHQPIYGPQ+ PLVAPNNDVG+DGM+INLASLLAGT T
Sbjct: 180 KFAYIWVGNSEAQCPGQCAWPFHQPIYGPQSPPLVAPNNDVGIDGMVINLASLLAGTVT 238


>ref|XP_002513945.1| conserved hypothetical protein [Ricinus communis]
           gi|223547031|gb|EEF48528.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 318

 Score =  305 bits (782), Expect = 5e-81
 Identities = 156/233 (66%), Positives = 171/233 (73%), Gaps = 2/233 (0%)
 Frame = +3

Query: 63  LFAIISLFHFTLEARTLNELFHDPSNLL-QYHNGPLLSGKISVNLIWYGKFKPSQRAIVS 239
           L  + SLFHF L AR L E       LL QYHNGPLL+GKIS+NLIWYGKFKPSQRAIVS
Sbjct: 11  LLLVGSLFHFNLAARLLTESAETKEALLFQYHNGPLLTGKISINLIWYGKFKPSQRAIVS 70

Query: 240 DFITXXXXXXXXXXXX-VGTWWKTTEKYYXXXXXXXXXXXXXNLGKQILVPNYSLGKSLT 416
           DFIT             V TWWK TEKYY             +LG QIL  +YSLGKSL+
Sbjct: 71  DFITSLSSVKSTVAQPSVVTWWKATEKYYRHINSKKSYNLALSLGAQILDESYSLGKSLS 130

Query: 417 QHHIVQLSSKGEQKNAINVVLTAADVTVAGFCTSRCGTHGSSSSKMGQIKGKNNKFAYIW 596
              IVQL+SKG QK+AINVVLT+ADV V GFC+SRCGTHGSS S    I GKN+KFAYIW
Sbjct: 131 NKQIVQLASKGGQKDAINVVLTSADVAVDGFCSSRCGTHGSSISAQKMINGKNSKFAYIW 190

Query: 597 VGNPETQCPGYCAWPFHQPIYGPQASPLVAPNNDVGLDGMIINLASLLAGTAT 755
           VGN ETQCPG CAWPFHQPIYGPQ++PL+APNND GLDGM+INLASLLAGT T
Sbjct: 191 VGNSETQCPGQCAWPFHQPIYGPQSTPLIAPNNDAGLDGMVINLASLLAGTTT 243


>ref|XP_003630473.1| Phi-1 protein [Medicago truncatula] gi|355524495|gb|AET04949.1|
           Phi-1 protein [Medicago truncatula]
          Length = 317

 Score =  305 bits (780), Expect = 9e-81
 Identities = 157/243 (64%), Positives = 178/243 (73%), Gaps = 4/243 (1%)
 Frame = +3

Query: 39  MASSIIQTL--FAIISLFHFTLEARTLNELFHDPSNLLQYHNGPLLSGKISVNLIWYGKF 212
           MASS    L  F +IS+F+ +  AR LNEL  D S LL YHNGPLL GKISVNLIWYG F
Sbjct: 1   MASSFQSLLKFFLLISIFYLSSAARNLNELVQDQSQLLHYHNGPLLYGKISVNLIWYGNF 60

Query: 213 KPSQRAIVSDFITXXXXXXXXXXXX--VGTWWKTTEKYYXXXXXXXXXXXXXNLGKQILV 386
           KPSQ+AI++DF T              V  WWKTTEKYY             +L KQIL 
Sbjct: 61  KPSQKAIITDFFTSLSSPSSSKPNQPSVSAWWKTTEKYYHLTSKKKSTQLSLSLNKQILD 120

Query: 387 PNYSLGKSLTQHHIVQLSSKGEQKNAINVVLTAADVTVAGFCTSRCGTHGSSSSKMGQIK 566
            NYSLGKSLT  +I+QL+SKGE K++INVVLT++DV+V  FC  RCGTHGSSSS + + K
Sbjct: 121 ENYSLGKSLTNKNIIQLASKGEHKDSINVVLTSSDVSVERFCMDRCGTHGSSSSLVPR-K 179

Query: 567 GKNNKFAYIWVGNPETQCPGYCAWPFHQPIYGPQASPLVAPNNDVGLDGMIINLASLLAG 746
           GK  KFAYIWVGN ETQCPG CAWPFHQPIYGPQ++PLVAPNNDVGLDGM+INLASLLAG
Sbjct: 180 GKVAKFAYIWVGNSETQCPGLCAWPFHQPIYGPQSAPLVAPNNDVGLDGMVINLASLLAG 239

Query: 747 TAT 755
           TAT
Sbjct: 240 TAT 242


Top