BLASTX nr result
ID: Panax21_contig00004890
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00004890
(1608 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 397 e-108
ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|2... 377 e-102
ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 368 3e-99
ref|XP_004147701.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop... 368 3e-99
ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycin... 367 6e-99
>ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|296086279|emb|CBI31720.3| unnamed protein product
[Vitis vinifera]
Length = 415
Score = 397 bits (1019), Expect = e-108
Identities = 228/436 (52%), Positives = 278/436 (63%), Gaps = 7/436 (1%)
Frame = +2
Query: 101 MVLSNKKLKQKIRVXXXXXXXXXXXXQNHPT---KAKVSNDPDQNSLKFLLDSVTQKPRL 271
MVLSNKKLKQK+R PT + DP+ SL+ LL S TQ PRL
Sbjct: 1 MVLSNKKLKQKLRAALAESLVVSVAGTTDPTTTDSTSTNPDPNPQSLENLLGSATQIPRL 60
Query: 272 SKREKRRGKILPFQ--ESVENLNASGDVIAQKEN-GEDGSEGVKKQMKRKREGKGGERME 442
SKREKRR K L Q E N S + A E +DG+ K K+K+ + GE ++
Sbjct: 61 SKREKRR-KTLSLQGPELAGTSNQSEEKEANTEALTDDGNNTENKDKKKKKRKRDGE-VD 118
Query: 443 NGALANVEAXXXXXXXXXXXXXXXXXXXXXXXXDAESVNGVSGEQSVAV-SIKASESQEN 619
+G + +E + V GE+ V + + S+SQEN
Sbjct: 119 DGEVG-LEENKNKLKKKKNKKKKKKKKKQKSEGQNKDVENEGGEKGVVKETAQISDSQEN 177
Query: 620 TDNSTKVYVGGIPYYSTEDDIRSFFESCGSITEIDCMKFPDTGKFRGIAIISFKTEAATK 799
D S KVYVGGIPYYSTEDDIRS+F+SCG+ITE+DCM FP++GKFRGIAIISFKTEAA K
Sbjct: 178 GDASNKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPESGKFRGIAIISFKTEAAAK 237
Query: 800 RALALDGADMGGLFLRIQPYKTTVEKKVSDFSPAIVEGYNRIYVGNLSWDITEDDLKNFF 979
RALALDGADMGGLFL+IQPYKTT K SDF+P +VEGYNRIYVGNL WDITED+++ FF
Sbjct: 238 RALALDGADMGGLFLKIQPYKTTRANKSSDFAPEMVEGYNRIYVGNLPWDITEDEVRKFF 297
Query: 980 SDCSVSSIRFGEDKETGEFRGYAHVDFSDSLSVTLALKLDQKIVCGRPVRIRCAVPAKKV 1159
S C+VSSIRFG DKET EFRGYAHVDFSD+ S+T+ALKLDQ+IVCGRP +IRCAVP K
Sbjct: 298 SRCNVSSIRFGMDKETQEFRGYAHVDFSDNPSLTMALKLDQEIVCGRPAKIRCAVPKKGA 357
Query: 1160 PQSNTKSDPTSRNAEXXXXXXXXXXXXXXXXXXXXXXXEISTISGKIRRRTCYECGEKGH 1339
+T + P+S AE +++ SGK++RRTCYECGE+GH
Sbjct: 358 KDYSTPA-PSSEKAENDGG--------------------LTSGSGKMKRRTCYECGERGH 396
Query: 1340 LTSSCPKKQTADTVKS 1387
++S+CPKKQ D S
Sbjct: 397 ISSACPKKQAPDLKNS 412
Score = 62.8 bits (151), Expect = 3e-07
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Frame = +2
Query: 1322 CGEKGHLTSSCPKKQTADTVKSVPTNTNADNVGVSTDNVEFSTDNVEVSAVSGKIRRRTC 1501
CG + + PKK D P++ A+N G T SGK++RRTC
Sbjct: 342 CGRPAKIRCAVPKKGAKDYSTPAPSSEKAENDGGLTSG-------------SGKMKRRTC 388
Query: 1502 YECGEKGHLTSSCPNKQ-PD 1558
YECGE+GH++S+CP KQ PD
Sbjct: 389 YECGERGHISSACPKKQAPD 408
>ref|XP_002316306.1| predicted protein [Populus trichocarpa] gi|222865346|gb|EEF02477.1|
predicted protein [Populus trichocarpa]
Length = 442
Score = 377 bits (967), Expect = e-102
Identities = 221/453 (48%), Positives = 271/453 (59%), Gaps = 18/453 (3%)
Frame = +2
Query: 101 MVLSNKKLKQKIR-VXXXXXXXXXXXXQNHPTKAKVSNDPDQNS-LKFLLDSVTQKPRLS 274
MVLSNKKLKQK+R V +K +P+ NS L+ LL++ Q+ RLS
Sbjct: 1 MVLSNKKLKQKLRAVKAEALVSKVSNGPERDSKNGSLGNPESNSQLQELLEAAKQRQRLS 60
Query: 275 KREKRR----------------GKILPFQESVENLNASGDVIAQKENGEDGSEGVKKQMK 406
KRE+RR G + VE++ GD++ ++ + SE K K
Sbjct: 61 KREQRRKTQSLQGIDSENKSQAGDNGEEDKKVEDIR-EGDLLVGEDGDGESSEKKIKTKK 119
Query: 407 RKREGKGGERMENGALANVEAXXXXXXXXXXXXXXXXXXXXXXXXDAESVNGVSGEQSVA 586
RKR+ + GE + G +VE E G E V
Sbjct: 120 RKRKREEGESEKKGLEEDVEVKEAKKAKKKKKKKKKKTKKKTKAKTEEEKAGGEAEGVVE 179
Query: 587 VSIKASESQENTDNSTKVYVGGIPYYSTEDDIRSFFESCGSITEIDCMKFPDTGKFRGIA 766
+ A ES+ + D + +VYVGGIPYYSTEDDIRSFFE CG+ITE+DCM FPD+GKFRGIA
Sbjct: 180 AAKVAGESKISEDIADRVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFRGIA 239
Query: 767 IISFKTEAATKRALALDGADMGGLFLRIQPYKTTVEKKVSDFSPAIVEGYNRIYVGNLSW 946
IISFKTEAA KRAL LDG+DMGG +L+IQPYKTT K +F+P IVEGYNRIYVGNLSW
Sbjct: 240 IISFKTEAAAKRALDLDGSDMGGFYLKIQPYKTTKVNKEPNFAPGIVEGYNRIYVGNLSW 299
Query: 947 DITEDDLKNFFSDCSVSSIRFGEDKETGEFRGYAHVDFSDSLSVTLALKLDQKIVCGRPV 1126
DITEDDLK FFSDC +SSIRFG DKETGEFRGY HVDFSD+ S+ ALKLDQ+IVCGRP+
Sbjct: 300 DITEDDLKKFFSDCKISSIRFGMDKETGEFRGYGHVDFSDNDSLVKALKLDQRIVCGRPI 359
Query: 1127 RIRCAVPAKKVPQSNTKSDPTSRNAEXXXXXXXXXXXXXXXXXXXXXXXEISTISGKIRR 1306
+I CAVP KK + + A+ S SGKI+R
Sbjct: 360 KISCAVP-KKGGKLQENQNQIVEEAKIQSTAMPMITSDEVNNGVP------SISSGKIKR 412
Query: 1307 RTCYECGEKGHLTSSCPKKQTADTVKSVPTNTN 1405
RTCYECGEKGH++++CPKK TAD PT++N
Sbjct: 413 RTCYECGEKGHISTACPKKLTAD-----PTDSN 440
>ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 432
Score = 368 bits (944), Expect = 3e-99
Identities = 217/465 (46%), Positives = 272/465 (58%), Gaps = 36/465 (7%)
Frame = +2
Query: 101 MVLSNKKLKQKIR--VXXXXXXXXXXXXQNHPTKAKVSNDPDQNSLKFLLDSVTQK-PRL 271
MVLSNKKLKQK+R + N + + + SLK LL + + PRL
Sbjct: 1 MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
Query: 272 SKREKRRGKILPFQESVENLNASGDVIAQKENGEDGSEGVKKQMKRKREG---------- 421
SKREKRR E+L +G +KE ED ++G+ ++ +++ EG
Sbjct: 61 SKREKRR----------ESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGL 110
Query: 422 ----KGGERMENGALANVEAXXXXXXXXXXXXXXXXXXXXXXXXDAE-----SVNGVSGE 574
+ ++++N + + E S N V G+
Sbjct: 111 EEDNEKAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKEKEKEKQGDVSGNDVKGQ 170
Query: 575 QSVAVSIKASESQENTDNSTKVYVGGIPYYSTEDDIRSFFESCGSITEIDCMKFPDTGKF 754
SE EN +TKVYVGGIPYYSTEDDI SFFESCG+ITEIDCMKFP++GKF
Sbjct: 171 VEETHYNIGSEFDENL--ATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKF 228
Query: 755 RGIAIISFKTEAATKRALALDGADMGGLFLRIQPYKTTVEKKVSDFSPAIVEGYNRIYVG 934
RGIAI+SFKTEAA KRALA DGADMGGLFL++QPYK T + + +DFSP +VEGYNRIY+G
Sbjct: 229 RGIAILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIG 288
Query: 935 NLSWDITEDDLKNFFSDCSVSSIRFGEDKETGEFRGYAHVDFSDSLSVTLALKLDQKIVC 1114
NLSWD+TEDDLK F +C ++SIRFG DKETGEFRGYAHVDFSD +S+ ALKLDQKI+
Sbjct: 289 NLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIH 348
Query: 1115 GRPVRIRCAVPAKKV--------------PQSNTKSDPTSRNAEXXXXXXXXXXXXXXXX 1252
GRPV+IRCAVP K P+ N + P ++ A
Sbjct: 349 GRPVKIRCAVPKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSV------------- 395
Query: 1253 XXXXXXXEISTISGKIRRRTCYECGEKGHLTSSCPKKQTADTVKS 1387
+S +SGKIRRRTCYECGEKGHL+S+CP KQ AD+V S
Sbjct: 396 --------VSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 432
Score = 67.8 bits (164), Expect = 8e-09
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2
Query: 1463 VSAVSGKIRRRTCYECGEKGHLTSSCPNKQPDESIKS 1573
VSAVSGKIRRRTCYECGEKGHL+S+CPNKQ +S+ S
Sbjct: 396 VSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 432
>ref|XP_004147701.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
sativus]
Length = 432
Score = 368 bits (944), Expect = 3e-99
Identities = 217/465 (46%), Positives = 272/465 (58%), Gaps = 36/465 (7%)
Frame = +2
Query: 101 MVLSNKKLKQKIR--VXXXXXXXXXXXXQNHPTKAKVSNDPDQNSLKFLLDSVTQK-PRL 271
MVLSNKKLKQK+R + N + + + SLK LL + + PRL
Sbjct: 1 MVLSNKKLKQKLREKLAESLISSVAGRDTNFGVSGERDTESPRKSLKELLGTASGNGPRL 60
Query: 272 SKREKRRGKILPFQESVENLNASGDVIAQKENGEDGSEGVKKQMKRKREG---------- 421
SKREKRR E+L +G +KE ED ++G+ ++ +++ EG
Sbjct: 61 SKREKRR----------ESLVLTGSDGNKKEKKEDENQGLGEKKRKRNEGVKEKNAVDGL 110
Query: 422 ----KGGERMENGALANVEAXXXXXXXXXXXXXXXXXXXXXXXXDAE-----SVNGVSGE 574
+ ++++N + + E S N V G+
Sbjct: 111 EEDNEKAKKLKNKKKQQQKKKMKKKKSNKKENNGEEEKEKEKDKEKEKQGDVSGNDVKGQ 170
Query: 575 QSVAVSIKASESQENTDNSTKVYVGGIPYYSTEDDIRSFFESCGSITEIDCMKFPDTGKF 754
SE EN +TKVYVGGIPYYSTEDDI SFFESCG+ITEIDCMKFP++GKF
Sbjct: 171 VEETHYNIGSEFDENL--ATKVYVGGIPYYSTEDDICSFFESCGTITEIDCMKFPESGKF 228
Query: 755 RGIAIISFKTEAATKRALALDGADMGGLFLRIQPYKTTVEKKVSDFSPAIVEGYNRIYVG 934
RGIAI+SFKTEAA KRALA DGADMGGLFL++QPYK T + + +DFSP +VEGYNRIY+G
Sbjct: 229 RGIAILSFKTEAAAKRALACDGADMGGLFLKVQPYKGTRKNRAADFSPGLVEGYNRIYIG 288
Query: 935 NLSWDITEDDLKNFFSDCSVSSIRFGEDKETGEFRGYAHVDFSDSLSVTLALKLDQKIVC 1114
NLSWD+TEDDLK F +C ++SIRFG DKETGEFRGYAHVDFSD +S+ ALKLDQKI+
Sbjct: 289 NLSWDVTEDDLKKLFVNCKIASIRFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIH 348
Query: 1115 GRPVRIRCAVPAKKV--------------PQSNTKSDPTSRNAEXXXXXXXXXXXXXXXX 1252
GRPV+IRCAVP K P+ N + P ++ A
Sbjct: 349 GRPVKIRCAVPKKGTENGGGGAVAGAETHPEMNPEPIPETKEAAVSV------------- 395
Query: 1253 XXXXXXXEISTISGKIRRRTCYECGEKGHLTSSCPKKQTADTVKS 1387
+S +SGKIRRRTCYECGEKGHL+S+CP KQ AD+V S
Sbjct: 396 --------VSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 432
Score = 67.8 bits (164), Expect = 8e-09
Identities = 30/37 (81%), Positives = 34/37 (91%)
Frame = +2
Query: 1463 VSAVSGKIRRRTCYECGEKGHLTSSCPNKQPDESIKS 1573
VSAVSGKIRRRTCYECGEKGHL+S+CPNKQ +S+ S
Sbjct: 396 VSAVSGKIRRRTCYECGEKGHLSSNCPNKQLADSVTS 432
>ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
gi|255644669|gb|ACU22837.1| unknown [Glycine max]
Length = 411
Score = 367 bits (941), Expect = 6e-99
Identities = 213/429 (49%), Positives = 260/429 (60%), Gaps = 6/429 (1%)
Frame = +2
Query: 101 MVLSNKKLKQKIRVXXXXXXXXXXXXQNHPTKAKVSNDPDQNSLKFLLDSVTQKPRLSKR 280
MVLSNKKLK K+R P+ + +N+ NSLK LLDS T K R SKR
Sbjct: 1 MVLSNKKLKLKLRAELAQRNSNAAAEP--PSSSSSTNN--NNSLKTLLDSATPKARFSKR 56
Query: 281 EKRRGKILPFQESVENLNASGDVIAQKE-NGEDGSEGVKKQMKRKREGKGGERMENGALA 457
EKRR K+ Q S + A KE E +EG + +++++ +G + NG
Sbjct: 57 EKRR-KLRSDQPSQQ---------ANKEIQTETEAEGSPNKKRKRKKVEGDDVAANG--- 103
Query: 458 NVEAXXXXXXXXXXXXXXXXXXXXXXXXDAESVNGVSGEQSVAVSIKASESQENTDN--- 628
V E+ + GE A + + + + DN
Sbjct: 104 -VSDTPKNKKKKQKQKKNKNKNKKKSTTAEENESNGGGEMPEATELTKTNTTTSKDNGDA 162
Query: 629 --STKVYVGGIPYYSTEDDIRSFFESCGSITEIDCMKFPDTGKFRGIAIISFKTEAATKR 802
+TK YVGGIPYYSTEDDIRS+FESCG+ITE+DCM FP+TGKFRGIAII+FKTEAA KR
Sbjct: 163 PTNTKAYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKR 222
Query: 803 ALALDGADMGGLFLRIQPYKTTVEKKVSDFSPAIVEGYNRIYVGNLSWDITEDDLKNFFS 982
ALALDGADMGGLFL+IQPYK T K SDF+P I+EGYNRIYVGNLSWDITE++L+ FF+
Sbjct: 223 ALALDGADMGGLFLKIQPYKATRANKASDFAPEILEGYNRIYVGNLSWDITEEELRKFFN 282
Query: 983 DCSVSSIRFGEDKETGEFRGYAHVDFSDSLSVTLALKLDQKIVCGRPVRIRCAVPAKKVP 1162
C ++S+RFG DKETGEFRGYAHVDFSDS S+ AL LDQ ++ GRPVRI CAVP KK
Sbjct: 283 GCEITSLRFGMDKETGEFRGYAHVDFSDSQSLKTALALDQNVLFGRPVRISCAVPLKKKT 342
Query: 1163 QSNTKSDPTSRNAEXXXXXXXXXXXXXXXXXXXXXXXEISTISGKIRRRTCYECGEKGHL 1342
++T S N + ST SGK+RRRTCYECGEKGH
Sbjct: 343 GTHTSSTVNGANGDKPSSTGSDRIDGADGDKPS------STGSGKMRRRTCYECGEKGHT 396
Query: 1343 TSSCPKKQT 1369
++CPKKQT
Sbjct: 397 FAACPKKQT 405
Score = 58.2 bits (139), Expect = 6e-06
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Frame = +2
Query: 1358 KKQTADTVKSVPTNTNADNVG-VSTDNVEFSTDNVEVSAVSGKIRRRTCYECGEKGHLTS 1534
KK+T S N D +D ++ + + S SGK+RRRTCYECGEKGH +
Sbjct: 339 KKKTGTHTSSTVNGANGDKPSSTGSDRIDGADGDKPSSTGSGKMRRRTCYECGEKGHTFA 398
Query: 1535 SCPNKQ 1552
+CP KQ
Sbjct: 399 ACPKKQ 404