BLASTX nr result

ID: Panax21_contig00004885 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004885
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]     137   2e-30
ref|XP_003615833.1| FAR1-related protein [Medicago truncatula] g...   133   3e-29
ref|XP_003623531.1| FAR1-related protein [Medicago truncatula] g...   129   4e-28
ref|XP_002438240.1| hypothetical protein SORBIDRAFT_10g010346 [S...   128   1e-27
ref|XP_003581310.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...   126   4e-27

>gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 800

 Score =  137 bits (345), Expect = 2e-30
 Identities = 84/226 (37%), Positives = 122/226 (53%), Gaps = 13/226 (5%)
 Frame = -1

Query: 640 NTFV-YYPQVADEFMPKLGQEFQTLDEIHNFYNIYAMHAGFSVRKFNETKKAGSDEICRK 464
           NT V + P   DE  P +G+ F TL E  +FY  YA  AGFSVR  N  K    D +  K
Sbjct: 77  NTSVEWIPACEDELKPVIGKVFDTLVEGGDFYKAYAYVAGFSVR--NSIKTKDKDGVKWK 134

Query: 463 EYVCYKQG-KGKQLAD----------VVVKRKRGSTKEGCTARIVVVKRND-LYVIKKIK 320
            ++C K+G K ++  D          +   RKR  T+EGC AR+V+ +  D  Y +    
Sbjct: 135 YFLCSKEGFKEEKKVDKPQLLIAENSLSKSRKRKLTREGCKARLVLKRTIDGKYEVSNFY 194

Query: 319 EGHSHPLSTLHKRHLLRSHRNVSTVQKSLSQQLGMVNIPQCQQYNFLAVQAGGFENIGCT 140
           EGHSH L +  KR  LRS RNV++V K++       N+   + Y  +  Q G +ENIGCT
Sbjct: 195 EGHSHGLVSPSKRQFLRSARNVTSVHKNILFSCNRANVGTSKSYQIMKEQVGSYENIGCT 254

Query: 139 QQDLYNFERDKRNELKGHDGDMLNEFLQLEQQKNPAFTFTIDTDNE 2
           Q+DL N+ R+ +  +K  D DM  +  + +++ NP+F +  + DNE
Sbjct: 255 QRDLQNYSRNLKELIKDSDADMFIDNFRRKREINPSFFYDYEADNE 300


>ref|XP_003615833.1| FAR1-related protein [Medicago truncatula]
           gi|355517168|gb|AES98791.1| FAR1-related protein
           [Medicago truncatula]
          Length = 662

 Score =  133 bits (335), Expect = 3e-29
 Identities = 81/215 (37%), Positives = 116/215 (53%), Gaps = 8/215 (3%)
 Frame = -1

Query: 622 PQVADEFMPKLGQEFQTLDEIHNFYNIYAMHAGFSVRKFNETKKAGSDEICRKEYVCYKQ 443
           P   DE  PK+GQ F TL E   FY  YA + GFSVR  +ET      +   K +VC K+
Sbjct: 27  PNYDDELKPKVGQIFDTLAEGKLFYQNYAHNVGFSVRSSSETTDKNGVKRW-KYFVCSKE 85

Query: 442 G------KGKQLADVVVK-RKRGSTKEGCTARIVVV-KRNDLYVIKKIKEGHSHPLSTLH 287
           G      K + L  V VK R+R  T+EGC A  V        Y + +  E H+H L++  
Sbjct: 86  GYLSDKKKDEVLDAVAVKSRRRSLTREGCNANAVFKWVEGGKYELARFNESHTHALASPS 145

Query: 286 KRHLLRSHRNVSTVQKSLSQQLGMVNIPQCQQYNFLAVQAGGFENIGCTQQDLYNFERDK 107
           KR  LRS R V+ + KSL    G  NI   + ++ +  Q GG+EN+GCTQ+DL N++RD 
Sbjct: 146 KRPFLRSARKVNPMHKSLLHAYGRANIGPSKSFHLMKEQFGGYENVGCTQKDLQNYKRDL 205

Query: 106 RNELKGHDGDMLNEFLQLEQQKNPAFTFTIDTDNE 2
           +  LK  D ++  +  + +Q+ NP+F +  + D E
Sbjct: 206 QTLLKDSDANVFIDNFRRKQELNPSFFYAYEVDEE 240


>ref|XP_003623531.1| FAR1-related protein [Medicago truncatula]
           gi|355498546|gb|AES79749.1| FAR1-related protein
           [Medicago truncatula]
          Length = 645

 Score =  129 bits (325), Expect = 4e-28
 Identities = 77/214 (35%), Positives = 113/214 (52%), Gaps = 7/214 (3%)
 Frame = -1

Query: 622 PQVADEFMPKLGQEFQTLDEIHNFYNIYAMHAGFSVRKFNETKKAGSDE-----ICRKEY 458
           P   D+  PK+GQ F TL E   FY  YA + GFSVR  +ET      +     +C KE 
Sbjct: 27  PNCDDKLKPKVGQIFDTLAEGKLFYQNYAHNVGFSVRSSSETTDKNGVKRWKYFVCSKEC 86

Query: 457 VCYKQGKGKQLADVVVK-RKRGSTKEGCTARIVVV-KRNDLYVIKKIKEGHSHPLSTLHK 284
               + K + L  V VK R+R  T+EGC A  V        Y + +  E H+H L++  K
Sbjct: 87  YLPDKKKDEVLDAVAVKSRRRSLTREGCNANAVFKWVEGGKYELARFNESHTHALASPSK 146

Query: 283 RHLLRSHRNVSTVQKSLSQQLGMVNIPQCQQYNFLAVQAGGFENIGCTQQDLYNFERDKR 104
           R  LRS   V+ + KSL    G  NI   + ++ +  Q GG+EN+GCTQ+DL N++RD +
Sbjct: 147 RPFLRSASKVNPMHKSLLHAYGRANIGPSKSFHLMKEQFGGYENVGCTQKDLQNYKRDLQ 206

Query: 103 NELKGHDGDMLNEFLQLEQQKNPAFTFTIDTDNE 2
             LK  D ++  +  + +Q+ NP+F +  + D E
Sbjct: 207 TLLKDSDANVFIDNFRRKQELNPSFFYAYEVDEE 240


>ref|XP_002438240.1| hypothetical protein SORBIDRAFT_10g010346 [Sorghum bicolor]
           gi|241916463|gb|EER89607.1| hypothetical protein
           SORBIDRAFT_10g010346 [Sorghum bicolor]
          Length = 261

 Score =  128 bits (321), Expect = 1e-27
 Identities = 77/205 (37%), Positives = 111/205 (54%), Gaps = 6/205 (2%)
 Frame = -1

Query: 598 PKLGQEFQTLDEIHNFYNIYAMHAGFSVRKFNETKKAGSDEICRKEYVCYKQGKGKQLAD 419
           P +G  F TL ++ NFY  YA  AGF VR     K+   +EI  + Y C ++G  K+  +
Sbjct: 56  PVVGMIFDTLTDVENFYKSYAHDAGFFVRVGQHKKQ--DEEIFYQRYCCSREGYRKERIE 113

Query: 418 VVVKRKRGSTKE-----GCTARIVVVKRNDL-YVIKKIKEGHSHPLSTLHKRHLLRSHRN 257
           V+  +KR ++K      GC ARIVV   +D  Y I    E H+H   +  K+HLLRS+R+
Sbjct: 114 VISPKKRKTSKSKETRCGCQARIVVKLGSDKKYRILSFVEEHNHGFVSPDKKHLLRSNRH 173

Query: 256 VSTVQKSLSQQLGMVNIPQCQQYNFLAVQAGGFENIGCTQQDLYNFERDKRNELKGHDGD 77
           VS   KS        +I   Q +  L V  GGFEN+GCT +DL N+ RD R+++K  D +
Sbjct: 174 VSERVKSTLFNCHKASIGMSQTFRLLHVSDGGFENVGCTLRDLKNYYRDSRSKIKDADAE 233

Query: 76  MLNEFLQLEQQKNPAFTFTIDTDNE 2
           M     + +++ NPAF +    D E
Sbjct: 234 MFVHQFERKKEVNPAFFYEFMVDKE 258


>ref|XP_003581310.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Brachypodium
           distachyon]
          Length = 743

 Score =  126 bits (316), Expect = 4e-27
 Identities = 74/215 (34%), Positives = 111/215 (51%), Gaps = 6/215 (2%)
 Frame = -1

Query: 628 YYPQVADEFMPKLGQEFQTLDEIHNFYNIYAMHAGFSVRKFNETKKAGSDEICRKEYVCY 449
           + P    +  PK+G  F+ L  +  FY  YA H+GF VR   + +K  ++ +  K Y+  
Sbjct: 16  FIPGCEQKLKPKVGMTFEGLKAVEEFYKSYAHHSGFGVR-IGQQRKLDNEIVRSKRYMRN 74

Query: 448 KQG----KGKQLADVVVKR-KRGSTKEGCTARIVV-VKRNDLYVIKKIKEGHSHPLSTLH 287
           ++G    KG ++ D  VKR K  +T+ GC A I V +   D Y I+   E H+H L +  
Sbjct: 75  REGFKSEKGNEIIDPSVKRHKNTATRCGCDAHIFVKLCVTDAYKIESWVEHHNHSLMSPD 134

Query: 286 KRHLLRSHRNVSTVQKSLSQQLGMVNIPQCQQYNFLAVQAGGFENIGCTQQDLYNFERDK 107
           K HL+RS+R VS   K+        +I  CQ Y  L V  GGF N+GCT++DL N+ RD 
Sbjct: 135 KHHLIRSNRQVSERAKNTLYTCNKASIGTCQAYRLLQVSEGGFSNVGCTKRDLQNYYRDL 194

Query: 106 RNELKGHDGDMLNEFLQLEQQKNPAFTFTIDTDNE 2
           R +++  D  M    L  + + NP+F +      E
Sbjct: 195 RYKIRNADAQMFVSQLARKHEANPSFFYDFVVSEE 229


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