BLASTX nr result

ID: Panax21_contig00004883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004883
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   146   9e-34
ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   147   1e-33
gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [So...   145   2e-33
ref|XP_003537078.1| PREDICTED: succinyl-CoA ligase [ADP-forming]...   144   3e-33
gb|ACU17170.1| unknown [Glycine max]                                  144   3e-33

>ref|XP_003542431.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial-like [Glycine max]
          Length = 422

 Score =  146 bits (368), Expect(2) = 9e-34
 Identities = 71/88 (80%), Positives = 80/88 (90%)
 Frame = +2

Query: 107 SLSVAGKWQQHQLRRLNIHEYQGAELMAKHGINVPPGIAVSSVEEIRNPIQDVFLKENEL 286
           SLSVAGKWQ +QLRRLNIHEYQGAELM+KHG+NVP G+AVSSVEE+R  I+D+F  ENEL
Sbjct: 13  SLSVAGKWQHNQLRRLNIHEYQGAELMSKHGVNVPRGVAVSSVEEVRKAIKDLFPNENEL 72

Query: 287 VVKSQILAGGRGLVTFKNGFQGGVHIVK 370
           VVKSQILAGGRGL TFK+G +GGVHIVK
Sbjct: 73  VVKSQILAGGRGLGTFKSGLKGGVHIVK 100



 Score = 23.5 bits (49), Expect(2) = 9e-34
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 73  MVRGLLKKIASKSL 114
           MVRGLL K+ S+SL
Sbjct: 1   MVRGLLNKLVSRSL 14


>ref|XP_002275953.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial [Vitis vinifera]
           gi|147782941|emb|CAN72294.1| hypothetical protein
           VITISV_037293 [Vitis vinifera]
           gi|297744178|emb|CBI37148.3| unnamed protein product
           [Vitis vinifera]
          Length = 423

 Score =  147 bits (372), Expect = 1e-33
 Identities = 72/88 (81%), Positives = 80/88 (90%)
 Frame = +2

Query: 107 SLSVAGKWQQHQLRRLNIHEYQGAELMAKHGINVPPGIAVSSVEEIRNPIQDVFLKENEL 286
           SL+VAGKWQQ QLRRLNIHEYQGAELM+K+GINVP G+AV S+EE+R  IQDVF KENEL
Sbjct: 13  SLNVAGKWQQQQLRRLNIHEYQGAELMSKYGINVPKGVAVGSIEEVRKTIQDVFPKENEL 72

Query: 287 VVKSQILAGGRGLVTFKNGFQGGVHIVK 370
           VVKSQILAGGRGL TFK+G +GGVHIVK
Sbjct: 73  VVKSQILAGGRGLGTFKSGLKGGVHIVK 100


>gb|ABC01911.1| succinyl CoA ligase beta subunit-like protein [Solanum tuberosum]
          Length = 421

 Score =  145 bits (365), Expect(2) = 2e-33
 Identities = 69/88 (78%), Positives = 80/88 (90%)
 Frame = +2

Query: 107 SLSVAGKWQQHQLRRLNIHEYQGAELMAKHGINVPPGIAVSSVEEIRNPIQDVFLKENEL 286
           SLSVAGKWQQ QLRRLNIHEYQGAELM K+GINVP G+AV+S++E++  IQDVF  ++E+
Sbjct: 13  SLSVAGKWQQQQLRRLNIHEYQGAELMGKYGINVPKGVAVASLDEVKKAIQDVFPNQSEV 72

Query: 287 VVKSQILAGGRGLVTFKNGFQGGVHIVK 370
           VVKSQ+LAGGRGL TFKNGFQGGVHIVK
Sbjct: 73  VVKSQVLAGGRGLGTFKNGFQGGVHIVK 100



 Score = 23.5 bits (49), Expect(2) = 2e-33
 Identities = 9/14 (64%), Positives = 14/14 (100%)
 Frame = +1

Query: 73  MVRGLLKKIASKSL 114
           MVRG+L+K+A++SL
Sbjct: 1   MVRGMLRKLANQSL 14


>ref|XP_003537078.1| PREDICTED: succinyl-CoA ligase [ADP-forming] subunit beta,
           mitochondrial [Glycine max]
          Length = 422

 Score =  144 bits (363), Expect(2) = 3e-33
 Identities = 71/88 (80%), Positives = 79/88 (89%)
 Frame = +2

Query: 107 SLSVAGKWQQHQLRRLNIHEYQGAELMAKHGINVPPGIAVSSVEEIRNPIQDVFLKENEL 286
           SLSVAGKWQ +QLRRLNIHEYQGAELM+KHG+NVP G+AVSSVEE R  I+D+F  ENEL
Sbjct: 13  SLSVAGKWQHNQLRRLNIHEYQGAELMSKHGVNVPRGVAVSSVEEARKVIKDLFPNENEL 72

Query: 287 VVKSQILAGGRGLVTFKNGFQGGVHIVK 370
           VVKSQILAGGRGL TFK+G +GGVHIVK
Sbjct: 73  VVKSQILAGGRGLGTFKSGLKGGVHIVK 100



 Score = 23.5 bits (49), Expect(2) = 3e-33
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 73  MVRGLLKKIASKSL 114
           MVRGLL K+ S+SL
Sbjct: 1   MVRGLLNKLVSRSL 14


>gb|ACU17170.1| unknown [Glycine max]
          Length = 172

 Score =  144 bits (363), Expect(2) = 3e-33
 Identities = 71/88 (80%), Positives = 79/88 (89%)
 Frame = +2

Query: 107 SLSVAGKWQQHQLRRLNIHEYQGAELMAKHGINVPPGIAVSSVEEIRNPIQDVFLKENEL 286
           SLSVAGKWQ +QLRRLNIHEYQGAELM+KHG+NVP G+AVSSVEE R  I+D+F  ENEL
Sbjct: 13  SLSVAGKWQHNQLRRLNIHEYQGAELMSKHGVNVPRGVAVSSVEEARKVIKDLFPNENEL 72

Query: 287 VVKSQILAGGRGLVTFKNGFQGGVHIVK 370
           VVKSQILAGGRGL TFK+G +GGVHIVK
Sbjct: 73  VVKSQILAGGRGLGTFKSGLKGGVHIVK 100



 Score = 23.5 bits (49), Expect(2) = 3e-33
 Identities = 10/14 (71%), Positives = 12/14 (85%)
 Frame = +1

Query: 73  MVRGLLKKIASKSL 114
           MVRGLL K+ S+SL
Sbjct: 1   MVRGLLNKLVSRSL 14


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