BLASTX nr result

ID: Panax21_contig00004871 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004871
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809...   176   4e-42
ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257...   174   1e-41
ref|XP_003603172.1| RNA-binding protein with multiple splicing [...   172   4e-41
ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|2...   172   4e-41
gb|AFK48970.1| unknown [Lotus japonicus]                              171   1e-40

>ref|XP_003526036.1| PREDICTED: uncharacterized protein LOC100809186 [Glycine max]
          Length = 228

 Score =  176 bits (446), Expect = 4e-42
 Identities = 79/97 (81%), Positives = 90/97 (92%)
 Frame = -3

Query: 692 ESNVLFVDGLPNDCSRREVGHLFRPFIGFREIRVVHKEPRRTGDKAKVLCFVEFTDAKCA 513
           +SN+LFV GLPNDC+RREVGHLFRPFIG+++IRVVHKEPRR+GDKA  LCFVEF D+KCA
Sbjct: 119 DSNILFVGGLPNDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMTLCFVEFVDSKCA 178

Query: 512 LTALEALQGYKFDNKKPDSPVLRIIFAHFPFRPPSDH 402
           LTA+EALQGYKFD+KKPDSP L+I FAHFPFR PSDH
Sbjct: 179 LTAMEALQGYKFDDKKPDSPTLKIEFAHFPFRLPSDH 215


>ref|XP_002280068.1| PREDICTED: uncharacterized protein LOC100257637 isoform 1 [Vitis
           vinifera] gi|296081671|emb|CBI20676.3| unnamed protein
           product [Vitis vinifera]
          Length = 239

 Score =  174 bits (442), Expect = 1e-41
 Identities = 81/97 (83%), Positives = 88/97 (90%)
 Frame = -3

Query: 695 KESNVLFVDGLPNDCSRREVGHLFRPFIGFREIRVVHKEPRRTGDKAKVLCFVEFTDAKC 516
           +ESN+LFVDGLP DC+RREVGHLFRPFIGF+EIRVVHKEPR +GDKA VLCFVEF DA C
Sbjct: 136 QESNILFVDGLPKDCTRREVGHLFRPFIGFKEIRVVHKEPRHSGDKAMVLCFVEFNDASC 195

Query: 515 ALTALEALQGYKFDNKKPDSPVLRIIFAHFPFRPPSD 405
           + TALEALQGYKFD+KKPDSP LRI FAHFPFR PSD
Sbjct: 196 SRTALEALQGYKFDDKKPDSPTLRIQFAHFPFRLPSD 232


>ref|XP_003603172.1| RNA-binding protein with multiple splicing [Medicago truncatula]
           gi|355492220|gb|AES73423.1| RNA-binding protein with
           multiple splicing [Medicago truncatula]
          Length = 229

 Score =  172 bits (437), Expect = 4e-41
 Identities = 76/96 (79%), Positives = 89/96 (92%)
 Frame = -3

Query: 692 ESNVLFVDGLPNDCSRREVGHLFRPFIGFREIRVVHKEPRRTGDKAKVLCFVEFTDAKCA 513
           ESN+LFV GLP DC+RREVGHLFRPFIG+++I+VVHKEPRR+GDKA + CFVEFT+ KCA
Sbjct: 131 ESNILFVGGLPKDCTRREVGHLFRPFIGYKDIKVVHKEPRRSGDKAMIFCFVEFTEPKCA 190

Query: 512 LTALEALQGYKFDNKKPDSPVLRIIFAHFPFRPPSD 405
           LTA+EALQGYKFD+KKPDSP L+I FAHFPFRPP+D
Sbjct: 191 LTAMEALQGYKFDDKKPDSPTLKIKFAHFPFRPPTD 226


>ref|XP_002308540.1| predicted protein [Populus trichocarpa] gi|222854516|gb|EEE92063.1|
           predicted protein [Populus trichocarpa]
          Length = 476

 Score =  172 bits (437), Expect = 4e-41
 Identities = 78/98 (79%), Positives = 89/98 (90%)
 Frame = -3

Query: 692 ESNVLFVDGLPNDCSRREVGHLFRPFIGFREIRVVHKEPRRTGDKAKVLCFVEFTDAKCA 513
           ESN+LFVDGLP DC+RREVGHLFRPFIG++EIRVVHKE R++GD+A VLCFVEFTDA CA
Sbjct: 172 ESNILFVDGLPTDCTRREVGHLFRPFIGYKEIRVVHKEARKSGDRATVLCFVEFTDANCA 231

Query: 512 LTALEALQGYKFDNKKPDSPVLRIIFAHFPFRPPSDHE 399
            TA+EALQGYKFD+KKPDSP L+I FA FPFRPPSD +
Sbjct: 232 ATAMEALQGYKFDDKKPDSPTLKIQFARFPFRPPSDRD 269


>gb|AFK48970.1| unknown [Lotus japonicus]
          Length = 229

 Score =  171 bits (433), Expect = 1e-40
 Identities = 78/97 (80%), Positives = 90/97 (92%)
 Frame = -3

Query: 692 ESNVLFVDGLPNDCSRREVGHLFRPFIGFREIRVVHKEPRRTGDKAKVLCFVEFTDAKCA 513
           +SNVLFVD LP DC+RREVGHLFRPFIG+++IRVVHKEPRR+GDKA VLCFVEF D+KCA
Sbjct: 128 DSNVLFVDVLPRDCTRREVGHLFRPFIGYKDIRVVHKEPRRSGDKAMVLCFVEFDDSKCA 187

Query: 512 LTALEALQGYKFDNKKPDSPVLRIIFAHFPFRPPSDH 402
           LTA+EALQGYKFD+KKPDS  L+I FAHFPFRPP+D+
Sbjct: 188 LTAMEALQGYKFDDKKPDSRTLKIQFAHFPFRPPADN 224


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