BLASTX nr result

ID: Panax21_contig00004850 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004850
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301948.1| predicted protein [Populus trichocarpa] gi|2...    78   9e-13
emb|CAN83887.1| hypothetical protein VITISV_001638 [Vitis vinifera]    78   9e-13
gb|AFK37300.1| unknown [Lotus japonicus]                               71   1e-10
ref|XP_002306958.1| predicted protein [Populus trichocarpa] gi|2...    69   3e-10
ref|XP_002510598.1| conserved hypothetical protein [Ricinus comm...    68   1e-09

>ref|XP_002301948.1| predicted protein [Populus trichocarpa] gi|222843674|gb|EEE81221.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 60/160 (37%), Positives = 81/160 (50%), Gaps = 19/160 (11%)
 Frame = -1

Query: 525 HKPKALKSVQSFSEVKKKNIP------RVLKPVQSFKNMF-GKAGGKKSGIHVD--PDLG 373
           HK K  K+      + ++  P      +V+K     K +F G   G+KS       P L 
Sbjct: 91  HKKKMNKATYKRVSLPQETKPASQTQRQVMKHASKLKRLFTGSKAGRKSNAFDGGKPTLP 150

Query: 372 VRASPCLSQMXXXXXXXXXXXXFDWTVAQIAPVE-------SDHDRNNIYDGGEDK---I 223
            RA P LSQM            FDWT  QIAPVE       SD +R + ++  ED+   I
Sbjct: 151 DRA-PSLSQMKRFASGRDTLASFDWTAHQIAPVEPVGRDYYSDEERGDSFEDQEDEEVII 209

Query: 222 CFTAPIQIGGCKAVSLEPKKEINLWKRRTMAQPKPLQLNA 103
            F+AP+ +GG   V L P+KE+NLWKRRTM  P+PL+L +
Sbjct: 210 PFSAPMVLGG--GVDLLPRKEVNLWKRRTMDPPEPLRLKS 247


>emb|CAN83887.1| hypothetical protein VITISV_001638 [Vitis vinifera]
          Length = 245

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 58/136 (42%), Positives = 78/136 (57%), Gaps = 12/136 (8%)
 Frame = -1

Query: 477 KKNIPRVLKPVQS-FKNMFGKAG-GKKSGIHVD--PDLGVRASPCLSQMXXXXXXXXXXX 310
           K++ PR +K   S  + +F  +  G+KS    D  P L  RA P L QM           
Sbjct: 110 KESKPREMKKQHSTLRRIFRSSNSGRKSDASSDDKPSLPDRA-PSLGQMKRFSSGRNAFS 168

Query: 309 XFDWTVAQIAPVESDH-------DRNNIYDGGEDKIC-FTAPIQIGGCKAVSLEPKKEIN 154
            FDWT A +APV+SDH       +R +  +  E+ I  F+API +GG  AV+LEP+KEIN
Sbjct: 169 NFDWT-APVAPVDSDHRSYYSDEERGDFEEEDEEFIIPFSAPILVGG--AVALEPRKEIN 225

Query: 153 LWKRRTMAQPKPLQLN 106
           LWKRRT+  P+PL+LN
Sbjct: 226 LWKRRTLVPPRPLRLN 241


>gb|AFK37300.1| unknown [Lotus japonicus]
          Length = 280

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 57/147 (38%), Positives = 76/147 (51%), Gaps = 20/147 (13%)
 Frame = -1

Query: 486 EVKKKNIPRVLKPVQSFKNMFGKAGGKKSGIHVDPDLGVRASPCLSQMXXXXXXXXXXXX 307
           EVKKKN+    + +        K+ G+KS    D     R +P +SQM            
Sbjct: 138 EVKKKNVASKFQRMLFHAAKQPKSAGRKS----DASSAEREAPHMSQMKRFSSGRDAFSS 193

Query: 306 FDWTVAQIAPVE-------SDHDRNNIYDGGEDK----ICFTAPIQIGG-----CKA--- 184
           FDW  A++A  E       SD DR    DG E++    I F+AP+ IGG     C A   
Sbjct: 194 FDWK-AEMAAEEIHIDDYYSDEDRVVESDGDEEEERIIIPFSAPMLIGGGAGGGCVAHGD 252

Query: 183 -VSLEPKKEINLWKRRTMAQPKPLQLN 106
            ++L+P+KEINLWKRRTMA P+PLQL+
Sbjct: 253 VLNLKPRKEINLWKRRTMAPPRPLQLD 279


>ref|XP_002306958.1| predicted protein [Populus trichocarpa] gi|222856407|gb|EEE93954.1|
           predicted protein [Populus trichocarpa]
          Length = 244

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 51/136 (37%), Positives = 64/136 (47%), Gaps = 12/136 (8%)
 Frame = -1

Query: 474 KNIPRVLKPVQSFKNMF--GKAGGKKSGIHVDPDLGVRASPCLSQMXXXXXXXXXXXXFD 301
           +N  ++ K       +F   KAG K      D       +P LSQM            FD
Sbjct: 105 QNPHKIKKHASKLMRLFTGSKAGRKSIVSGGDKPTLPDKTPSLSQMTRFASGRDTLAGFD 164

Query: 300 WTVAQIAPVESDH----------DRNNIYDGGEDKICFTAPIQIGGCKAVSLEPKKEINL 151
           WT  QIAPVESD           DR    +  E  I F+API +GG   + L P+KEINL
Sbjct: 165 WTAHQIAPVESDRRDYYSDEERVDRLEEEEHEEVIIPFSAPIMVGG--GIDLLPRKEINL 222

Query: 150 WKRRTMAQPKPLQLNA 103
           WK+RT+  P PLQL +
Sbjct: 223 WKKRTINPPNPLQLRS 238


>ref|XP_002510598.1| conserved hypothetical protein [Ricinus communis]
           gi|223551299|gb|EEF52785.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score = 67.8 bits (164), Expect = 1e-09
 Identities = 42/97 (43%), Positives = 57/97 (58%), Gaps = 11/97 (11%)
 Frame = -1

Query: 363 SPCLSQMXXXXXXXXXXXXFDWTVAQIAPVESDH----------DRNNIYDGGEDKIC-F 217
           +P LSQ+            FDWT +Q+ P ESDH          +R++ +D  ED I  F
Sbjct: 175 APALSQLKRFASGRDTFANFDWT-SQVVPAESDHRNYYSDDEEEERHSDHDYDEDVIIPF 233

Query: 216 TAPIQIGGCKAVSLEPKKEINLWKRRTMAQPKPLQLN 106
           +API +G     +L+P+KE+NLW+RRTM  PKPLQLN
Sbjct: 234 SAPIIVGPGVG-NLQPRKEVNLWRRRTMNPPKPLQLN 269


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