BLASTX nr result

ID: Panax21_contig00004839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004839
         (2030 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283606.1| PREDICTED: peptidyl-tRNA hydrolase, mitochon...   153   1e-34
ref|XP_003629730.1| Peptidyl-tRNA hydrolase [Medicago truncatula...   149   4e-33
ref|NP_001239948.1| uncharacterized protein LOC100808506 [Glycin...   149   4e-33
ref|XP_003524957.1| PREDICTED: peptidyl-tRNA hydrolase, mitochon...   145   3e-32
gb|ACU21547.1| unknown [Glycine max]                                  143   2e-31

>ref|XP_002283606.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial [Vitis vinifera]
           gi|297746470|emb|CBI16526.3| unnamed protein product
           [Vitis vinifera]
          Length = 217

 Score =  153 bits (387), Expect = 1e-34
 Identities = 71/96 (73%), Positives = 80/96 (83%)
 Frame = -2

Query: 820 MLSRISRRYLCTVTPQPWLFVGLGNLGDKYKTIRHNVGFKMIDAFAELQGIPVDTVHCKA 641
           ML+R SRR  CT +P+PWLFVGLGN GDKYK  RHNVGF+MI+AFAE QGIP+DTVHCKA
Sbjct: 1   MLNRFSRRLFCTASPRPWLFVGLGNPGDKYKGTRHNVGFEMINAFAESQGIPMDTVHCKA 60

Query: 640 LFGKGFVDGVSVFLAKPQTYMNFSGESVSNLKLYFK 533
           +FG+GFVD V VFLAKPQTYMN SGES   L  Y+K
Sbjct: 61  IFGQGFVDAVPVFLAKPQTYMNLSGESAGPLAAYYK 96


>ref|XP_003629730.1| Peptidyl-tRNA hydrolase [Medicago truncatula]
           gi|355523752|gb|AET04206.1| Peptidyl-tRNA hydrolase
           [Medicago truncatula]
          Length = 403

 Score =  149 bits (375), Expect = 4e-33
 Identities = 70/96 (72%), Positives = 78/96 (81%)
 Frame = -2

Query: 820 MLSRISRRYLCTVTPQPWLFVGLGNLGDKYKTIRHNVGFKMIDAFAELQGIPVDTVHCKA 641
           MLS +++R  CTV P+PWLFVGLGN GDKYK  RHNVGF+MIDAFAE QGI +DTVHCKA
Sbjct: 1   MLSTLTKRSFCTVAPRPWLFVGLGNPGDKYKGTRHNVGFEMIDAFAESQGIAMDTVHCKA 60

Query: 640 LFGKGFVDGVSVFLAKPQTYMNFSGESVSNLKLYFK 533
           +FGKGFV  V VFLAKPQTYMN SGES   L  Y+K
Sbjct: 61  IFGKGFVGDVPVFLAKPQTYMNLSGESAGPLAAYYK 96


>ref|NP_001239948.1| uncharacterized protein LOC100808506 [Glycine max]
           gi|255645293|gb|ACU23143.1| unknown [Glycine max]
          Length = 218

 Score =  149 bits (375), Expect = 4e-33
 Identities = 71/96 (73%), Positives = 78/96 (81%)
 Frame = -2

Query: 820 MLSRISRRYLCTVTPQPWLFVGLGNLGDKYKTIRHNVGFKMIDAFAELQGIPVDTVHCKA 641
           ML R+SRR  CT TP+PWLFVGLGN GDK+K  RHNVGF+MIDAFAE QGIP+DTVH KA
Sbjct: 1   MLHRLSRRCFCTFTPRPWLFVGLGNPGDKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKA 60

Query: 640 LFGKGFVDGVSVFLAKPQTYMNFSGESVSNLKLYFK 533
           +FGKGFV  V VFLAKPQTYMN SGES   L  Y+K
Sbjct: 61  IFGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYK 96


>ref|XP_003524957.1| PREDICTED: peptidyl-tRNA hydrolase, mitochondrial-like [Glycine
           max]
          Length = 217

 Score =  145 bits (367), Expect = 3e-32
 Identities = 68/96 (70%), Positives = 79/96 (82%)
 Frame = -2

Query: 820 MLSRISRRYLCTVTPQPWLFVGLGNLGDKYKTIRHNVGFKMIDAFAELQGIPVDTVHCKA 641
           ML+R++RR+ CTV P+PWLFVGLGN G+K+K  RHNVGF+MIDAFAE QGIP+DTVH KA
Sbjct: 1   MLNRLNRRFFCTVAPRPWLFVGLGNPGEKFKGTRHNVGFEMIDAFAESQGIPMDTVHSKA 60

Query: 640 LFGKGFVDGVSVFLAKPQTYMNFSGESVSNLKLYFK 533
           + GKGFV  V VFLAKPQTYMN SGES   L  Y+K
Sbjct: 61  ISGKGFVGEVPVFLAKPQTYMNLSGESTGPLAAYYK 96


>gb|ACU21547.1| unknown [Glycine max]
          Length = 202

 Score =  143 bits (361), Expect = 2e-31
 Identities = 67/96 (69%), Positives = 78/96 (81%)
 Frame = -2

Query: 820 MLSRISRRYLCTVTPQPWLFVGLGNLGDKYKTIRHNVGFKMIDAFAELQGIPVDTVHCKA 641
           ML+R++RR+ CTV P+PWLFVGLGN G+K+K  RHNVGF+MIDA AE QGIP+DTVH KA
Sbjct: 1   MLNRLNRRFFCTVAPRPWLFVGLGNPGEKFKGTRHNVGFEMIDALAESQGIPMDTVHSKA 60

Query: 640 LFGKGFVDGVSVFLAKPQTYMNFSGESVSNLKLYFK 533
           + GKGFV  V VFLAKPQTYMN SGES   L  Y+K
Sbjct: 61  ISGKGFVGEVPVFLAKPQTYMNLSGESAGPLAAYYK 96


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