BLASTX nr result
ID: Panax21_contig00004837
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Panax21_contig00004837
(1967 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002302734.1| predicted protein [Populus trichocarpa] gi|2... 434 0.0
ref|XP_002273033.1| PREDICTED: fumarate hydratase 1, mitochondri... 432 0.0
ref|NP_182273.1| fumarate hydratase, class II [Arabidopsis thali... 428 0.0
dbj|BAH19491.1| AT2G47510 [Arabidopsis thaliana] 428 0.0
ref|XP_004152237.1| PREDICTED: fumarate hydratase 1, mitochondri... 425 0.0
>ref|XP_002302734.1| predicted protein [Populus trichocarpa] gi|222844460|gb|EEE82007.1|
predicted protein [Populus trichocarpa]
Length = 490
Score = 434 bits (1116), Expect(2) = 0.0
Identities = 218/259 (84%), Positives = 228/259 (88%)
Frame = -3
Query: 1740 MPMFVAYRRLTGGGSSSMRCAXXXXXXXXXXXSREERDTFGPIQVPADKLWGAQTQRSLQ 1561
M M++ RRL+ G ++ REERDTFGPI VPADKLWGAQTQRSLQ
Sbjct: 1 MAMYIVSRRLSTGSTT---WRYGNWLRSYSTAFREERDTFGPISVPADKLWGAQTQRSLQ 57
Query: 1560 NFYIGGERERMPEPIVHAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVAEGKLNDHFP 1381
NF IGG+RERMPEPI+ AFGILKKCAAKVNM+YGLDPSIGKAIMQAA EVAEGKL+DHFP
Sbjct: 58 NFDIGGDRERMPEPIIRAFGILKKCAAKVNMQYGLDPSIGKAIMQAAHEVAEGKLSDHFP 117
Query: 1380 LVVWQTGSGTQSNMNANEVIANRAAEILGHQRGEKFVHPNDHVNRSQSSNDTFPTVMHIA 1201
LVVWQTGSGTQSNMNANEVIANRAAEILGH+RGEKFVHPNDHVNRSQSSNDTFPTVMHIA
Sbjct: 118 LVVWQTGSGTQSNMNANEVIANRAAEILGHKRGEKFVHPNDHVNRSQSSNDTFPTVMHIA 177
Query: 1200 AAMEINSRLIPKLKQLHTTLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYATQVKYG 1021
AA EINSRLIPKLK LH TLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGY TQVKYG
Sbjct: 178 AATEINSRLIPKLKTLHLTLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYTTQVKYG 237
Query: 1020 IDRVMCTLPRMYQLAQGGT 964
IDRVMCTLP MYQLAQGGT
Sbjct: 238 IDRVMCTLPHMYQLAQGGT 256
Score = 404 bits (1037), Expect(2) = 0.0
Identities = 206/223 (92%), Positives = 211/223 (94%)
Frame = -2
Query: 844 FDVRIAAAVAEETKLPFVTAENKFEALAAHDAFVETSGVLNTVAISLMKIGNDIRLLGSG 665
FDV+IA+AVAEET LPFVTAENKFEALAAHDAFVETSG LNTVA SLMKI NDIRLLGSG
Sbjct: 268 FDVKIASAVAEETNLPFVTAENKFEALAAHDAFVETSGALNTVATSLMKIANDIRLLGSG 327
Query: 664 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVGITVGGSNGHFELNVF 485
PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHV ITVGGSNGHFELNVF
Sbjct: 328 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSNGHFELNVF 387
Query: 484 KPMIASCLLHSLRLLADASASFEKNCARGI*ANRERISKLLHESLMLVTSLNPKIGYDNA 305
KPMIAS LLHS+RLL DASASFEKNC RGI ANRERISKLLHESLMLVTSLNPKIGYDNA
Sbjct: 388 KPMIASGLLHSIRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTSLNPKIGYDNA 447
Query: 304 AAVAKKAHKEGSTLKEAALNLGVLTSEEFDELVVPEKMIGPSD 176
AAVAK AHKEGSTLKEAAL LG+LTSEEFD LVVPEKMIGP+D
Sbjct: 448 AAVAKLAHKEGSTLKEAALKLGMLTSEEFDTLVVPEKMIGPTD 490
>ref|XP_002273033.1| PREDICTED: fumarate hydratase 1, mitochondrial [Vitis vinifera]
gi|297743928|emb|CBI36898.3| unnamed protein product
[Vitis vinifera]
Length = 494
Score = 432 bits (1111), Expect(2) = 0.0
Identities = 216/260 (83%), Positives = 228/260 (87%), Gaps = 1/260 (0%)
Frame = -3
Query: 1740 MPMFVAYRRLTGGGSSS-MRCAXXXXXXXXXXXSREERDTFGPIQVPADKLWGAQTQRSL 1564
M M+ A RRL GG + S + REE+DTFGPI VP+DKLWGAQTQRSL
Sbjct: 1 MMMYAASRRLCGGSAGSPLLGLRYMCLRSLSTSFREEKDTFGPILVPSDKLWGAQTQRSL 60
Query: 1563 QNFYIGGERERMPEPIVHAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVAEGKLNDHF 1384
QNF IGGERE+MPEPI+ AFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEV+EGKLNDHF
Sbjct: 61 QNFDIGGEREQMPEPIIRAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVSEGKLNDHF 120
Query: 1383 PLVVWQTGSGTQSNMNANEVIANRAAEILGHQRGEKFVHPNDHVNRSQSSNDTFPTVMHI 1204
PLV+WQTGSGTQSNMNANEVIANRAAEILGHQRGEK+VHPNDHVNRSQSSNDTFPTVMHI
Sbjct: 121 PLVIWQTGSGTQSNMNANEVIANRAAEILGHQRGEKYVHPNDHVNRSQSSNDTFPTVMHI 180
Query: 1203 AAAMEINSRLIPKLKQLHTTLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYATQVKY 1024
AAA EINSRLIP LK L T LHSKS+EFKDI+KIGRTHTQDATPLTLGQEFSGY TQVKY
Sbjct: 181 AAATEINSRLIPSLKHLETALHSKSIEFKDIIKIGRTHTQDATPLTLGQEFSGYYTQVKY 240
Query: 1023 GIDRVMCTLPRMYQLAQGGT 964
GIDRV CTLPRMYQLAQGGT
Sbjct: 241 GIDRVTCTLPRMYQLAQGGT 260
Score = 400 bits (1027), Expect(2) = 0.0
Identities = 204/223 (91%), Positives = 210/223 (94%)
Frame = -2
Query: 844 FDVRIAAAVAEETKLPFVTAENKFEALAAHDAFVETSGVLNTVAISLMKIGNDIRLLGSG 665
FDV+IA AVAEET LPFVTAENKFEALAAHDAFVETSG +NTVA SLMKI NDIRLLGSG
Sbjct: 272 FDVKIARAVAEETNLPFVTAENKFEALAAHDAFVETSGSVNTVATSLMKIANDIRLLGSG 331
Query: 664 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVGITVGGSNGHFELNVF 485
PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHV ITVGGSNGHFELNVF
Sbjct: 332 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSNGHFELNVF 391
Query: 484 KPMIASCLLHSLRLLADASASFEKNCARGI*ANRERISKLLHESLMLVTSLNPKIGYDNA 305
KP+IAS LL S+RLL DASASFEKNC RGI AN+ERI KLLHESLMLVTSLNPKIGYDNA
Sbjct: 392 KPLIASGLLRSIRLLGDASASFEKNCVRGIQANKERILKLLHESLMLVTSLNPKIGYDNA 451
Query: 304 AAVAKKAHKEGSTLKEAALNLGVLTSEEFDELVVPEKMIGPSD 176
AAVAKKAHKEG TLKEAALNLGVLTSEEFD+LVVPEKMIGPSD
Sbjct: 452 AAVAKKAHKEGRTLKEAALNLGVLTSEEFDQLVVPEKMIGPSD 494
>ref|NP_182273.1| fumarate hydratase, class II [Arabidopsis thaliana]
gi|145331433|ref|NP_001078075.1| fumarate hydratase,
class II [Arabidopsis thaliana]
gi|39931311|sp|P93033.2|FUM1_ARATH RecName: Full=Fumarate
hydratase 1, mitochondrial; Short=Fumarase 1; Flags:
Precursor gi|2443751|gb|AAB71399.1| fumarase [Arabidopsis
thaliana] gi|2529676|gb|AAC62859.1| putative fumarase
[Arabidopsis thaliana] gi|15809968|gb|AAL06911.1|
At2g47510/T30B22.19 [Arabidopsis thaliana]
gi|17064768|gb|AAL32538.1| putative fumarase [Arabidopsis
thaliana] gi|28059023|gb|AAO29979.1| putative fumarase
[Arabidopsis thaliana] gi|330255758|gb|AEC10852.1|
fumarate hydratase, class II [Arabidopsis thaliana]
gi|330255759|gb|AEC10853.1| fumarate hydratase, class II
[Arabidopsis thaliana]
Length = 492
Score = 428 bits (1100), Expect(2) = 0.0
Identities = 217/260 (83%), Positives = 232/260 (89%), Gaps = 1/260 (0%)
Frame = -3
Query: 1740 MPMFVAYRRLTGGGS-SSMRCAXXXXXXXXXXXSREERDTFGPIQVPADKLWGAQTQRSL 1564
M ++VA RRL+GG + +++R A REERDTFGPIQVP+DKLWGAQTQRSL
Sbjct: 1 MSIYVASRRLSGGTTVTALRYATSLRSYSTSF--REERDTFGPIQVPSDKLWGAQTQRSL 58
Query: 1563 QNFYIGGERERMPEPIVHAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVAEGKLNDHF 1384
QNF IGGERERMPEPIV AFG+LKKCAAKVNMEYGLDP+IGKAIMQAAQEVAEGKLNDHF
Sbjct: 59 QNFEIGGERERMPEPIVRAFGVLKKCAAKVNMEYGLDPTIGKAIMQAAQEVAEGKLNDHF 118
Query: 1383 PLVVWQTGSGTQSNMNANEVIANRAAEILGHQRGEKFVHPNDHVNRSQSSNDTFPTVMHI 1204
PLVVWQTGSGTQSNMNANEVIANRAAEILG +RGEK VHPNDHVNRSQSSNDTFPTVMHI
Sbjct: 119 PLVVWQTGSGTQSNMNANEVIANRAAEILGRKRGEKCVHPNDHVNRSQSSNDTFPTVMHI 178
Query: 1203 AAAMEINSRLIPKLKQLHTTLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYATQVKY 1024
AAA EINSRLIP LK LH+TL SKS EFKDIVKIGRTHTQDATPLTLGQEF GYATQVKY
Sbjct: 179 AAATEINSRLIPSLKTLHSTLESKSFEFKDIVKIGRTHTQDATPLTLGQEFGGYATQVKY 238
Query: 1023 GIDRVMCTLPRMYQLAQGGT 964
G++RV CTLPR+YQLAQGGT
Sbjct: 239 GLNRVTCTLPRLYQLAQGGT 258
Score = 402 bits (1034), Expect(2) = 0.0
Identities = 203/223 (91%), Positives = 211/223 (94%)
Frame = -2
Query: 844 FDVRIAAAVAEETKLPFVTAENKFEALAAHDAFVETSGVLNTVAISLMKIGNDIRLLGSG 665
FDV+IAAAVAEET LPFVTAENKFEALAAHDA VETSG LNT+A SLMKI NDIR LGSG
Sbjct: 270 FDVKIAAAVAEETNLPFVTAENKFEALAAHDACVETSGSLNTIATSLMKIANDIRFLGSG 329
Query: 664 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVGITVGGSNGHFELNVF 485
PRCGLGEL+LPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHV +TVGGSNGHFELNVF
Sbjct: 330 PRCGLGELVLPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVF 389
Query: 484 KPMIASCLLHSLRLLADASASFEKNCARGI*ANRERISKLLHESLMLVTSLNPKIGYDNA 305
KP+IAS LLHS+RL+ADASASFEKNC RGI ANRERISKLLHESLMLVTSLNPKIGYDNA
Sbjct: 390 KPVIASALLHSVRLIADASASFEKNCVRGIEANRERISKLLHESLMLVTSLNPKIGYDNA 449
Query: 304 AAVAKKAHKEGSTLKEAALNLGVLTSEEFDELVVPEKMIGPSD 176
AAVAKKAHKEG TLKEAALNLGVLT+EEFD LVVPEKMIGPSD
Sbjct: 450 AAVAKKAHKEGCTLKEAALNLGVLTAEEFDTLVVPEKMIGPSD 492
>dbj|BAH19491.1| AT2G47510 [Arabidopsis thaliana]
Length = 492
Score = 428 bits (1100), Expect(2) = 0.0
Identities = 217/260 (83%), Positives = 232/260 (89%), Gaps = 1/260 (0%)
Frame = -3
Query: 1740 MPMFVAYRRLTGGGS-SSMRCAXXXXXXXXXXXSREERDTFGPIQVPADKLWGAQTQRSL 1564
M ++VA RRL+GG + +++R A REERDTFGPIQVP+DKLWGAQTQRSL
Sbjct: 1 MSIYVASRRLSGGTTVTALRYATSLRSYSTSF--REERDTFGPIQVPSDKLWGAQTQRSL 58
Query: 1563 QNFYIGGERERMPEPIVHAFGILKKCAAKVNMEYGLDPSIGKAIMQAAQEVAEGKLNDHF 1384
QNF IGGERERMPEPIV AFG+LKKCAAKVNMEYGLDP+IGKAIMQAAQEVAEGKLNDHF
Sbjct: 59 QNFEIGGERERMPEPIVRAFGVLKKCAAKVNMEYGLDPTIGKAIMQAAQEVAEGKLNDHF 118
Query: 1383 PLVVWQTGSGTQSNMNANEVIANRAAEILGHQRGEKFVHPNDHVNRSQSSNDTFPTVMHI 1204
PLVVWQTGSGTQSNMNANEVIANRAAEILG +RGEK VHPNDHVNRSQSSNDTFPTVMHI
Sbjct: 119 PLVVWQTGSGTQSNMNANEVIANRAAEILGRKRGEKCVHPNDHVNRSQSSNDTFPTVMHI 178
Query: 1203 AAAMEINSRLIPKLKQLHTTLHSKSVEFKDIVKIGRTHTQDATPLTLGQEFSGYATQVKY 1024
AAA EINSRLIP LK LH+TL SKS EFKDIVKIGRTHTQDATPLTLGQEF GYATQVKY
Sbjct: 179 AAATEINSRLIPSLKTLHSTLESKSFEFKDIVKIGRTHTQDATPLTLGQEFGGYATQVKY 238
Query: 1023 GIDRVMCTLPRMYQLAQGGT 964
G++RV CTLPR+YQLAQGGT
Sbjct: 239 GLNRVTCTLPRLYQLAQGGT 258
Score = 400 bits (1028), Expect(2) = 0.0
Identities = 202/223 (90%), Positives = 210/223 (94%)
Frame = -2
Query: 844 FDVRIAAAVAEETKLPFVTAENKFEALAAHDAFVETSGVLNTVAISLMKIGNDIRLLGSG 665
FDV+IAAAVAEET LPFVTAENKFEALAAHDA VETSG LNT+A SLMKI NDIR LGSG
Sbjct: 270 FDVKIAAAVAEETNLPFVTAENKFEALAAHDACVETSGSLNTIATSLMKIANDIRFLGSG 329
Query: 664 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVGITVGGSNGHFELNVF 485
PRCGLGEL+LPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHV +TVGGSNGHFELNVF
Sbjct: 330 PRCGLGELVLPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAVTVGGSNGHFELNVF 389
Query: 484 KPMIASCLLHSLRLLADASASFEKNCARGI*ANRERISKLLHESLMLVTSLNPKIGYDNA 305
KP+IAS LLHS+RL+ADASASFEKNC RGI ANRERISKLLHESLMLVTS NPKIGYDNA
Sbjct: 390 KPVIASALLHSVRLIADASASFEKNCVRGIEANRERISKLLHESLMLVTSWNPKIGYDNA 449
Query: 304 AAVAKKAHKEGSTLKEAALNLGVLTSEEFDELVVPEKMIGPSD 176
AAVAKKAHKEG TLKEAALNLGVLT+EEFD LVVPEKMIGPSD
Sbjct: 450 AAVAKKAHKEGCTLKEAALNLGVLTAEEFDTLVVPEKMIGPSD 492
>ref|XP_004152237.1| PREDICTED: fumarate hydratase 1, mitochondrial-like [Cucumis sativus]
gi|449484240|ref|XP_004156827.1| PREDICTED: fumarate
hydratase 1, mitochondrial-like [Cucumis sativus]
Length = 495
Score = 425 bits (1092), Expect(2) = 0.0
Identities = 203/226 (89%), Positives = 219/226 (96%)
Frame = -3
Query: 1641 REERDTFGPIQVPADKLWGAQTQRSLQNFYIGGERERMPEPIVHAFGILKKCAAKVNMEY 1462
REERDTFGPI VP+D+LWGAQTQRSLQNF IGG+RERMPEPI+ AFG+LKKCAAKVNM+Y
Sbjct: 35 REERDTFGPINVPSDRLWGAQTQRSLQNFEIGGDRERMPEPIIRAFGVLKKCAAKVNMDY 94
Query: 1461 GLDPSIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRAAEILGHQRG 1282
GLDP+IGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRA+EILGH+RG
Sbjct: 95 GLDPTIGKAIMQAAQEVAEGKLNDHFPLVVWQTGSGTQSNMNANEVIANRASEILGHKRG 154
Query: 1281 EKFVHPNDHVNRSQSSNDTFPTVMHIAAAMEINSRLIPKLKQLHTTLHSKSVEFKDIVKI 1102
+KFVHPNDHVNRSQSSNDTFPTVMHIAAA EINS+ IPKLK LH++L+SKS+EFKDIVKI
Sbjct: 155 DKFVHPNDHVNRSQSSNDTFPTVMHIAAATEINSKFIPKLKTLHSSLYSKSIEFKDIVKI 214
Query: 1101 GRTHTQDATPLTLGQEFSGYATQVKYGIDRVMCTLPRMYQLAQGGT 964
GRTHTQDATPLTLGQEFSGY TQVKYGIDRV+CTLPRMYQLAQGGT
Sbjct: 215 GRTHTQDATPLTLGQEFSGYTTQVKYGIDRVLCTLPRMYQLAQGGT 260
Score = 401 bits (1031), Expect(2) = 0.0
Identities = 204/223 (91%), Positives = 211/223 (94%)
Frame = -2
Query: 844 FDVRIAAAVAEETKLPFVTAENKFEALAAHDAFVETSGVLNTVAISLMKIGNDIRLLGSG 665
FDV+IAAAVAEET LPFVTAENKFEALAAHDAFVETSG LNTVA SLMKI NDIRLLGSG
Sbjct: 272 FDVKIAAAVAEETNLPFVTAENKFEALAAHDAFVETSGSLNTVAASLMKIANDIRLLGSG 331
Query: 664 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVGITVGGSNGHFELNVF 485
PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHV ITVGGSNGHFELNV+
Sbjct: 332 PRCGLGELILPENEPGSSIMPGKVNPTQCEALTMVCAQVMGNHVAITVGGSNGHFELNVY 391
Query: 484 KPMIASCLLHSLRLLADASASFEKNCARGI*ANRERISKLLHESLMLVTSLNPKIGYDNA 305
KPMIA+ LLHSLRLL DASASFEKNC RGI ANRERISKLLHESLMLVT+LNPKIGYDNA
Sbjct: 392 KPMIANALLHSLRLLGDASASFEKNCVRGIQANRERISKLLHESLMLVTALNPKIGYDNA 451
Query: 304 AAVAKKAHKEGSTLKEAALNLGVLTSEEFDELVVPEKMIGPSD 176
AAVAKKAHKEGSTLKEAAL LGVL+ E+FD+ VVPEKMIGPSD
Sbjct: 452 AAVAKKAHKEGSTLKEAALKLGVLSEEDFDKHVVPEKMIGPSD 494