BLASTX nr result

ID: Panax21_contig00004823 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004823
         (910 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]         308   1e-81
ref|XP_002527284.1| Photosystem I reaction center subunit XI, ch...   301   1e-79
ref|XP_002303024.1| predicted protein [Populus trichocarpa] gi|2...   294   2e-77
ref|NP_001236277.1| uncharacterized protein LOC100500317 [Glycin...   294   2e-77
ref|NP_001236868.1| uncharacterized protein LOC100527240 [Glycin...   293   3e-77

>gb|AAO85557.1| photosystem I subunit XI [Nicotiana attenuata]
          Length = 220

 Score =  308 bits (788), Expect = 1e-81
 Identities = 156/208 (75%), Positives = 169/208 (81%)
 Frame = -3

Query: 770 KSSFTSSALIRGGLVSPKDISGAPLRVLPSRRNSSFAIKAVQVDKPTYQVIQPINGDPFI 591
           KS F SS     GLV+PK ISG+P ++ PS R S F IKAVQ DKPTYQVIQP+NGDPFI
Sbjct: 13  KSKFASSLTRGSGLVTPKGISGSPFKIFPSTRKSCFTIKAVQTDKPTYQVIQPLNGDPFI 72

Query: 590 GSLETPVTSSPLIAWYLSNLPGYRTAVSPLLRGVEVGLAHGFLLVGPFVKTGPLRNTEIX 411
           GSLETPVTSSPLIAWYLSNLP YRTAV+PLLRGVEVGLAHGFLLVGPFVK GPLRNTE  
Sbjct: 73  GSLETPVTSSPLIAWYLSNLPAYRTAVNPLLRGVEVGLAHGFLLVGPFVKAGPLRNTEYA 132

Query: 410 XXXXXXXXXXLVVILSICLTMYGIASFKEGEASTAPSLTLTGRKKQPDELQTADGWSKXX 231
                     LVVILS+CLT+YGI+SFKEGEASTAP+LTLTGRKK PD+LQTA+GWSK  
Sbjct: 133 GGAGSLAAAGLVVILSMCLTIYGISSFKEGEASTAPALTLTGRKKVPDQLQTAEGWSKFT 192

Query: 230 XXXXXXGISGVIWAYFLLYVLDLPYFVK 147
                 GISGV WAYFLLYVLDLPY+VK
Sbjct: 193 GGFFFGGISGVTWAYFLLYVLDLPYYVK 220


>ref|XP_002527284.1| Photosystem I reaction center subunit XI, chloroplast precursor,
           putative [Ricinus communis] gi|223533377|gb|EEF35128.1|
           Photosystem I reaction center subunit XI, chloroplast
           precursor, putative [Ricinus communis]
          Length = 218

 Score =  301 bits (771), Expect = 1e-79
 Identities = 154/208 (74%), Positives = 169/208 (81%)
 Frame = -3

Query: 770 KSSFTSSALIRGGLVSPKDISGAPLRVLPSRRNSSFAIKAVQVDKPTYQVIQPINGDPFI 591
           KSSF SS  +  GL  P+ ISG P RV P++R +SF +KA+Q +KPT+QVIQPINGDPFI
Sbjct: 13  KSSFASS--VTRGLGVPRGISGNPFRVSPAKRATSFTVKAIQSEKPTFQVIQPINGDPFI 70

Query: 590 GSLETPVTSSPLIAWYLSNLPGYRTAVSPLLRGVEVGLAHGFLLVGPFVKTGPLRNTEIX 411
           GSLETPVTSSPLIAWYLSNLP YRTAVSPLLRG+EVGLAHGFLLVGPFVK GPLRNTE  
Sbjct: 71  GSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKAGPLRNTEFA 130

Query: 410 XXXXXXXXXXLVVILSICLTMYGIASFKEGEASTAPSLTLTGRKKQPDELQTADGWSKXX 231
                     LV ILSICLTMYG+ASF EGE STAPSLTLTGRKK+PD+LQTADGW+K  
Sbjct: 131 GAAGSLAAGGLVAILSICLTMYGVASFNEGEPSTAPSLTLTGRKKEPDQLQTADGWAKFT 190

Query: 230 XXXXXXGISGVIWAYFLLYVLDLPYFVK 147
                 GISGVIWAYFLLYVL+LPYFVK
Sbjct: 191 GGFFFGGISGVIWAYFLLYVLNLPYFVK 218


>ref|XP_002303024.1| predicted protein [Populus trichocarpa] gi|222844750|gb|EEE82297.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  294 bits (753), Expect = 2e-77
 Identities = 152/208 (73%), Positives = 167/208 (80%)
 Frame = -3

Query: 770 KSSFTSSALIRGGLVSPKDISGAPLRVLPSRRNSSFAIKAVQVDKPTYQVIQPINGDPFI 591
           KSSF SS   R  LV P  ISGAP RV PS+R  SF +KA+Q +KPTYQV+QPINGDPFI
Sbjct: 13  KSSFASSLARR--LVIPTAISGAPFRVSPSKR--SFTVKAIQSEKPTYQVVQPINGDPFI 68

Query: 590 GSLETPVTSSPLIAWYLSNLPGYRTAVSPLLRGVEVGLAHGFLLVGPFVKTGPLRNTEIX 411
           GSLETP+TSSPLIAWYLSNLP YRTAVSPLLRG+EVGLAHGFLLVGPFVK GPLRNTE  
Sbjct: 69  GSLETPITSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGFLLVGPFVKAGPLRNTEYA 128

Query: 410 XXXXXXXXXXLVVILSICLTMYGIASFKEGEASTAPSLTLTGRKKQPDELQTADGWSKXX 231
                     LV ILSICLTMYG+ASF EGE STAP LTLTGRKK+PD+LQT+DGW+K  
Sbjct: 129 GAAGSLAAGGLVAILSICLTMYGVASFTEGEPSTAPGLTLTGRKKEPDQLQTSDGWAKFS 188

Query: 230 XXXXXXGISGVIWAYFLLYVLDLPYFVK 147
                 GISGVIWAYFLLYV++LPY+VK
Sbjct: 189 GGFFFGGISGVIWAYFLLYVINLPYYVK 216


>ref|NP_001236277.1| uncharacterized protein LOC100500317 [Glycine max]
           gi|255630008|gb|ACU15356.1| unknown [Glycine max]
          Length = 214

 Score =  294 bits (752), Expect = 2e-77
 Identities = 149/209 (71%), Positives = 171/209 (81%), Gaps = 1/209 (0%)
 Frame = -3

Query: 770 KSSFTSSALIRGGLVSPKDISGA-PLRVLPSRRNSSFAIKAVQVDKPTYQVIQPINGDPF 594
           KS+FT +      LV+PK +S + PL +LPS+R  SF ++A+Q +KPTYQVIQPINGDPF
Sbjct: 12  KSTFTKT------LVAPKGLSASSPLHLLPSKRQFSFTVRAIQSEKPTYQVIQPINGDPF 65

Query: 593 IGSLETPVTSSPLIAWYLSNLPGYRTAVSPLLRGVEVGLAHGFLLVGPFVKTGPLRNTEI 414
           IGSLETPVTSSPLIAWYLSNLP YRTAVSPLLRG+EVGLAHG+LLVGPFVK GPLRNTEI
Sbjct: 66  IGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFVKAGPLRNTEI 125

Query: 413 XXXXXXXXXXXLVVILSICLTMYGIASFKEGEASTAPSLTLTGRKKQPDELQTADGWSKX 234
                      LVVILS+CLT+YGI+SF EG+ STAPSLTLTGRKK+PD+LQTADGW+K 
Sbjct: 126 AGQAGSLAAGGLVVILSLCLTIYGISSFNEGDPSTAPSLTLTGRKKEPDQLQTADGWAKF 185

Query: 233 XXXXXXXGISGVIWAYFLLYVLDLPYFVK 147
                  GISGVIWAYFLLYVLDLPY++K
Sbjct: 186 TGGFFFGGISGVIWAYFLLYVLDLPYYIK 214


>ref|NP_001236868.1| uncharacterized protein LOC100527240 [Glycine max]
           gi|255631856|gb|ACU16295.1| unknown [Glycine max]
          Length = 214

 Score =  293 bits (751), Expect = 3e-77
 Identities = 150/209 (71%), Positives = 170/209 (81%), Gaps = 1/209 (0%)
 Frame = -3

Query: 770 KSSFTSSALIRGGLVSPKDISGA-PLRVLPSRRNSSFAIKAVQVDKPTYQVIQPINGDPF 594
           KS+FT +      LV+PK +S + PL ++PSRR  SF +KA+Q +KPTYQVIQPINGDPF
Sbjct: 12  KSTFTRT------LVAPKGLSASSPLHLVPSRRQFSFTVKAIQSEKPTYQVIQPINGDPF 65

Query: 593 IGSLETPVTSSPLIAWYLSNLPGYRTAVSPLLRGVEVGLAHGFLLVGPFVKTGPLRNTEI 414
           IGSLETPVTSSPLIAWYLSNLP YRTAVSPLLRG+EVGLAHG+LLVGPFVK GPLRNTEI
Sbjct: 66  IGSLETPVTSSPLIAWYLSNLPAYRTAVSPLLRGIEVGLAHGYLLVGPFVKAGPLRNTEI 125

Query: 413 XXXXXXXXXXXLVVILSICLTMYGIASFKEGEASTAPSLTLTGRKKQPDELQTADGWSKX 234
                      LVVILS+CLT+YGI+SF EG  STAPSLTLTGRKK+PD+LQTADGW+K 
Sbjct: 126 AGQAGSLAAGGLVVILSLCLTIYGISSFNEGAPSTAPSLTLTGRKKEPDQLQTADGWAKF 185

Query: 233 XXXXXXXGISGVIWAYFLLYVLDLPYFVK 147
                  GISGVIWAYFLLYVLDLPY++K
Sbjct: 186 TGGFFFGGISGVIWAYFLLYVLDLPYYIK 214


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