BLASTX nr result
ID: Panax21_contig00004820
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Panax21_contig00004820 (506 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002308553.1| predicted protein [Populus trichocarpa] gi|2... 46 4e-10 ref|XP_002278933.2| PREDICTED: zinc finger protein NUTCRACKER-li... 47 7e-10 >ref|XP_002308553.1| predicted protein [Populus trichocarpa] gi|222854529|gb|EEE92076.1| predicted protein [Populus trichocarpa] Length = 444 Score = 45.8 bits (107), Expect(2) = 4e-10 Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 1/79 (1%) Frame = -3 Query: 504 MSATALLQKAAQMGVTSSAGRHGFANVT-SGGCMGQVNGTGGAPPDSLLLQDLMASAQGF 328 MSATALLQKAAQMGVT S A G ++ D + ++SA GF Sbjct: 292 MSATALLQKAAQMGVTVSKPSPSPATAAILRPHQGHMSDHQNPVHD---MMSSLSSASGF 348 Query: 327 EGSTSFEEAFDGMLNQKQE 271 +GS+ E F+GMLN K++ Sbjct: 349 DGSSFDNEDFNGMLNPKRD 367 Score = 43.1 bits (100), Expect(2) = 4e-10 Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%) Frame = -1 Query: 155 GNKEGGVNEGMTRDFLGLRAFPQHRSHFLNM-AGFD 51 G+ GG N+G+TRDFLGL+AFP FLN+ AGFD Sbjct: 391 GSHHGGGNDGLTRDFLGLKAFP--HKDFLNLPAGFD 424 >ref|XP_002278933.2| PREDICTED: zinc finger protein NUTCRACKER-like [Vitis vinifera] Length = 509 Score = 46.6 bits (109), Expect(2) = 7e-10 Identities = 47/134 (35%), Positives = 54/134 (40%), Gaps = 56/134 (41%) Frame = -3 Query: 504 MSATALLQKAAQMGVT--------------------------------SSAGR------- 442 MSATALLQ+AAQMGVT S+AG Sbjct: 305 MSATALLQQAAQMGVTMSKPSPSPPMLRPHQAHMSAANAGFSSTAVATSTAGSDLGLSSR 364 Query: 441 --------HGFAN------VTSGGCMGQVNGTGGAPPDSLLLQDLMAS---AQGFEGSTS 313 HG A+ VTSG G G L D+M+S A GF G S Sbjct: 365 DEMASGFIHGLASFGSKAAVTSGFMEHVATGAGAGAAAPSLFHDMMSSLSSASGF-GGPS 423 Query: 312 FEEAFDGMLNQKQE 271 FEEAF+GMLN K+E Sbjct: 424 FEEAFNGMLNPKRE 437 Score = 41.6 bits (96), Expect(2) = 7e-10 Identities = 24/42 (57%), Positives = 29/42 (69%) Frame = -1 Query: 176 FHLNDQKGNKEGGVNEGMTRDFLGLRAFPQHRSHFLNMAGFD 51 F +D +G GG N+G+TRDFLGLRAF HR FLN+ G D Sbjct: 453 FSRSDHEG---GGGNDGLTRDFLGLRAF-SHRD-FLNIPGLD 489