BLASTX nr result

ID: Panax21_contig00004820 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004820
         (506 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308553.1| predicted protein [Populus trichocarpa] gi|2...    46   4e-10
ref|XP_002278933.2| PREDICTED: zinc finger protein NUTCRACKER-li...    47   7e-10

>ref|XP_002308553.1| predicted protein [Populus trichocarpa] gi|222854529|gb|EEE92076.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score = 45.8 bits (107), Expect(2) = 4e-10
 Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
 Frame = -3

Query: 504 MSATALLQKAAQMGVTSSAGRHGFANVT-SGGCMGQVNGTGGAPPDSLLLQDLMASAQGF 328
           MSATALLQKAAQMGVT S      A         G ++       D   +   ++SA GF
Sbjct: 292 MSATALLQKAAQMGVTVSKPSPSPATAAILRPHQGHMSDHQNPVHD---MMSSLSSASGF 348

Query: 327 EGSTSFEEAFDGMLNQKQE 271
           +GS+   E F+GMLN K++
Sbjct: 349 DGSSFDNEDFNGMLNPKRD 367



 Score = 43.1 bits (100), Expect(2) = 4e-10
 Identities = 22/36 (61%), Positives = 27/36 (75%), Gaps = 1/36 (2%)
 Frame = -1

Query: 155 GNKEGGVNEGMTRDFLGLRAFPQHRSHFLNM-AGFD 51
           G+  GG N+G+TRDFLGL+AFP     FLN+ AGFD
Sbjct: 391 GSHHGGGNDGLTRDFLGLKAFP--HKDFLNLPAGFD 424


>ref|XP_002278933.2| PREDICTED: zinc finger protein NUTCRACKER-like [Vitis vinifera]
          Length = 509

 Score = 46.6 bits (109), Expect(2) = 7e-10
 Identities = 47/134 (35%), Positives = 54/134 (40%), Gaps = 56/134 (41%)
 Frame = -3

Query: 504 MSATALLQKAAQMGVT--------------------------------SSAGR------- 442
           MSATALLQ+AAQMGVT                                S+AG        
Sbjct: 305 MSATALLQQAAQMGVTMSKPSPSPPMLRPHQAHMSAANAGFSSTAVATSTAGSDLGLSSR 364

Query: 441 --------HGFAN------VTSGGCMGQVNGTGGAPPDSLLLQDLMAS---AQGFEGSTS 313
                   HG A+      VTSG       G G       L  D+M+S   A GF G  S
Sbjct: 365 DEMASGFIHGLASFGSKAAVTSGFMEHVATGAGAGAAAPSLFHDMMSSLSSASGF-GGPS 423

Query: 312 FEEAFDGMLNQKQE 271
           FEEAF+GMLN K+E
Sbjct: 424 FEEAFNGMLNPKRE 437



 Score = 41.6 bits (96), Expect(2) = 7e-10
 Identities = 24/42 (57%), Positives = 29/42 (69%)
 Frame = -1

Query: 176 FHLNDQKGNKEGGVNEGMTRDFLGLRAFPQHRSHFLNMAGFD 51
           F  +D +G   GG N+G+TRDFLGLRAF  HR  FLN+ G D
Sbjct: 453 FSRSDHEG---GGGNDGLTRDFLGLRAF-SHRD-FLNIPGLD 489


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