BLASTX nr result

ID: Panax21_contig00004818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004818
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313128.1| predicted protein [Populus trichocarpa] gi|2...   331   1e-88
ref|XP_002518729.1| ssm4 protein, putative [Ricinus communis] gi...   328   5e-88
ref|XP_004136968.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   323   2e-86
ref|XP_002298731.1| predicted protein [Populus trichocarpa] gi|2...   322   4e-86
ref|XP_003518705.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   321   9e-86

>ref|XP_002313128.1| predicted protein [Populus trichocarpa] gi|222849536|gb|EEE87083.1|
           predicted protein [Populus trichocarpa]
          Length = 1110

 Score =  331 bits (848), Expect = 1e-88
 Identities = 173/246 (70%), Positives = 189/246 (76%)
 Frame = -1

Query: 740 FITFWIWRLAFVRSFGEAHRLFLSHISTTAVLTDCLHGFLLSASIVFIFLGATSLRDYFR 561
           FITFWIWRLAFVRS GEA RLFLSHISTT +LTDCLHGFLLSASIVFIFLGATSLRDYFR
Sbjct: 164 FITFWIWRLAFVRSLGEAQRLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFR 223

Query: 560 HLXXXXXXXXXXXXXXXRNGVHAARRPPVQANRNIXXXXXXXXXXXXXXXXXXXQLIRRN 381
           HL               RNG  AARRPP QANRN+                   Q+IRRN
Sbjct: 224 HLRELGGQDAEREDEGDRNGARAARRPPGQANRNVAGEVNAEDAGGAQGIAGAGQIIRRN 283

Query: 380 AENVAARWEMQAARLEAHMEQIFDGMDDADGAEDVPFDELVGMQGPVFHLVENAFTVLAS 201
           AENVAARWEMQAARLEAH+EQ+FDG+DDADGAEDVPFDELVGMQGPVFHLVENAFTVLAS
Sbjct: 284 AENVAARWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLAS 343

Query: 200 NMIFLGIVIFVPFSLGRIIXXXXXXXXXSATTPLLAIVVPLTESALSVANTTLKNALTDT 21
           NMIFLG VIFVPFSLGRII          A+ P+L+ V+PLT++ALS+AN TLKNALT  
Sbjct: 344 NMIFLGAVIFVPFSLGRIILYYISWLFSFASVPVLSTVMPLTDTALSLANITLKNALTAV 403

Query: 20  TNMSSD 3
            N++S+
Sbjct: 404 ENLTSE 409


>ref|XP_002518729.1| ssm4 protein, putative [Ricinus communis]
           gi|223542110|gb|EEF43654.1| ssm4 protein, putative
           [Ricinus communis]
          Length = 806

 Score =  328 bits (842), Expect = 5e-88
 Identities = 175/247 (70%), Positives = 191/247 (77%), Gaps = 1/247 (0%)
 Frame = -1

Query: 740 FITFWIWRLAFVRSFGEAHRLFLSHISTTAVLTDCLHGFLLSASIVFIFLGATSLRDYFR 561
           FITFWIWRLAFVRSFGEA RLFLSHISTT +LTDCLHGFLLSASIVFIFLGATSLRDYFR
Sbjct: 165 FITFWIWRLAFVRSFGEAQRLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFR 224

Query: 560 HLXXXXXXXXXXXXXXXRNGVHAARRPPVQAN-RNIXXXXXXXXXXXXXXXXXXXQLIRR 384
           HL               RNG  AARRP  QAN RN                    Q+IRR
Sbjct: 225 HLRELGGQDAEREDEGDRNGARAARRPQGQANNRNFAGEANAEDAGGGQGIAGAGQIIRR 284

Query: 383 NAENVAARWEMQAARLEAHMEQIFDGMDDADGAEDVPFDELVGMQGPVFHLVENAFTVLA 204
           NAENVAARWEMQAARLEAH+EQ+FDG+DDADGAEDVPFDELVGMQGPVFHLVENAFTVLA
Sbjct: 285 NAENVAARWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLA 344

Query: 203 SNMIFLGIVIFVPFSLGRIIXXXXXXXXXSATTPLLAIVVPLTESALSVANTTLKNALTD 24
           SNMIFLG+VIFVPFSLGRI+         SA+ PLL+ V+PLT++ALS+AN TLKNALT 
Sbjct: 345 SNMIFLGVVIFVPFSLGRIVLYYISWLFSSASGPLLSTVMPLTDTALSIANFTLKNALTA 404

Query: 23  TTNMSSD 3
            TN++S+
Sbjct: 405 VTNLTSE 411


>ref|XP_004136968.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Cucumis
           sativus] gi|449495626|ref|XP_004159898.1| PREDICTED: E3
           ubiquitin-protein ligase MARCH6-like [Cucumis sativus]
          Length = 1098

 Score =  323 bits (828), Expect = 2e-86
 Identities = 173/246 (70%), Positives = 187/246 (76%)
 Frame = -1

Query: 740 FITFWIWRLAFVRSFGEAHRLFLSHISTTAVLTDCLHGFLLSASIVFIFLGATSLRDYFR 561
           FITFWIWRLAFVRSFGEA RLFLSH+S T VLTDCLHGFLLSASIVFIFLGATSLRDYFR
Sbjct: 157 FITFWIWRLAFVRSFGEAQRLFLSHLSATVVLTDCLHGFLLSASIVFIFLGATSLRDYFR 216

Query: 560 HLXXXXXXXXXXXXXXXRNGVHAARRPPVQANRNIXXXXXXXXXXXXXXXXXXXQLIRRN 381
           HL               RNG  A RRPP QANRN                    Q+IRRN
Sbjct: 217 HLRELGGQDGEREDDADRNGARAVRRPPGQANRNFAGDANGEDAGGAPVLAGAGQMIRRN 276

Query: 380 AENVAARWEMQAARLEAHMEQIFDGMDDADGAEDVPFDELVGMQGPVFHLVENAFTVLAS 201
           AENVAARWEMQAARLEAH+EQ+FD +DDADGAEDVPFDELVGMQGPVFHLVENAFTVLAS
Sbjct: 277 AENVAARWEMQAARLEAHVEQMFD-VDDADGAEDVPFDELVGMQGPVFHLVENAFTVLAS 335

Query: 200 NMIFLGIVIFVPFSLGRIIXXXXXXXXXSATTPLLAIVVPLTESALSVANTTLKNALTDT 21
           NMIFLG+VIFVPF+LGRII         SA+ P+ + ++PLTESALS+AN TLKNALT  
Sbjct: 336 NMIFLGVVIFVPFTLGRIILHYVSWLFSSASGPVFSTMMPLTESALSLANITLKNALTAV 395

Query: 20  TNMSSD 3
            N+SSD
Sbjct: 396 ANLSSD 401


>ref|XP_002298731.1| predicted protein [Populus trichocarpa] gi|222845989|gb|EEE83536.1|
           predicted protein [Populus trichocarpa]
          Length = 1054

 Score =  322 bits (826), Expect = 4e-86
 Identities = 168/246 (68%), Positives = 187/246 (76%)
 Frame = -1

Query: 740 FITFWIWRLAFVRSFGEAHRLFLSHISTTAVLTDCLHGFLLSASIVFIFLGATSLRDYFR 561
           FITFWIWRLAFVRSF EA RLFLSHISTT +LTDCLHGFLLSASIVFIFLGATSLRDYFR
Sbjct: 125 FITFWIWRLAFVRSFVEAQRLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFR 184

Query: 560 HLXXXXXXXXXXXXXXXRNGVHAARRPPVQANRNIXXXXXXXXXXXXXXXXXXXQLIRRN 381
           HL               +NG  AAR+ P QANRN+                   Q+I+RN
Sbjct: 185 HLRELGGQDAEREDDGDQNGARAARQQPGQANRNVAGEANAEDAGGAQGIAGGGQIIQRN 244

Query: 380 AENVAARWEMQAARLEAHMEQIFDGMDDADGAEDVPFDELVGMQGPVFHLVENAFTVLAS 201
            ENVAARWEMQAARLEAH+EQ+FDG+DDADGAEDVPFDELVGMQGPVFHLVENAFTVLAS
Sbjct: 245 VENVAARWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLAS 304

Query: 200 NMIFLGIVIFVPFSLGRIIXXXXXXXXXSATTPLLAIVVPLTESALSVANTTLKNALTDT 21
           NMIFLG VIFVPFSLGRII          A+ P+L+ V+PLT++ALS+AN TLKNALT  
Sbjct: 305 NMIFLGAVIFVPFSLGRIILYYISWLFSFASVPVLSTVMPLTDTALSLANITLKNALTAV 364

Query: 20  TNMSSD 3
            N++S+
Sbjct: 365 ANLTSE 370


>ref|XP_003518705.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Glycine max]
          Length = 1123

 Score =  321 bits (823), Expect = 9e-86
 Identities = 170/247 (68%), Positives = 186/247 (75%), Gaps = 1/247 (0%)
 Frame = -1

Query: 740 FITFWIWRLAFVRSFGEAHRLFLSHISTTAVLTDCLHGFLLSASIVFIFLGATSLRDYFR 561
           FITFWIWRLAFVRS GEA RLFLSH+ST  +LTDCLHGFLLSASIVFIFLGATSLRDYFR
Sbjct: 178 FITFWIWRLAFVRSLGEAQRLFLSHLSTAVILTDCLHGFLLSASIVFIFLGATSLRDYFR 237

Query: 560 HLXXXXXXXXXXXXXXXRNGVHAARRPPVQANRNIXXXXXXXXXXXXXXXXXXXQ-LIRR 384
           HL               RNG   ARRPP QANRNI                     +IRR
Sbjct: 238 HLREIGGQDADREDEVDRNGARIARRPPGQANRNINNGDGNGEDAGGVQGIAGAGQVIRR 297

Query: 383 NAENVAARWEMQAARLEAHMEQIFDGMDDADGAEDVPFDELVGMQGPVFHLVENAFTVLA 204
           NAENVAARWEMQAARLEAH+EQ+FDG+DDADGAEDVPFDELVGMQGPVFHLVENAFTVLA
Sbjct: 298 NAENVAARWEMQAARLEAHVEQMFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVLA 357

Query: 203 SNMIFLGIVIFVPFSLGRIIXXXXXXXXXSATTPLLAIVVPLTESALSVANTTLKNALTD 24
           SNMIFLG+VIFVPFSLGRII         +A+ P+L+ V PL +++LS+AN TLKNALT 
Sbjct: 358 SNMIFLGVVIFVPFSLGRIILHYLSWFFSTASGPVLSAVAPLADTSLSLANITLKNALTA 417

Query: 23  TTNMSSD 3
             NMSS+
Sbjct: 418 VKNMSSE 424


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