BLASTX nr result

ID: Panax21_contig00004817 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004817
         (1256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518729.1| ssm4 protein, putative [Ricinus communis] gi...   528   e-148
ref|XP_004136968.1| PREDICTED: E3 ubiquitin-protein ligase MARCH...   517   e-144
ref|XP_002313128.1| predicted protein [Populus trichocarpa] gi|2...   516   e-144
ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH...   511   e-142
emb|CBI32382.3| unnamed protein product [Vitis vinifera]              511   e-142

>ref|XP_002518729.1| ssm4 protein, putative [Ricinus communis] gi|223542110|gb|EEF43654.1|
            ssm4 protein, putative [Ricinus communis]
          Length = 806

 Score =  528 bits (1361), Expect = e-148
 Identities = 289/420 (68%), Positives = 317/420 (75%), Gaps = 2/420 (0%)
 Frame = -1

Query: 1256 FITFWIWQLVSVRSFGEAHRLFLSHVSTTAILTDCLHGFLLSASIVFIFLGATSLRDYFR 1077
            FITFWIW+L  VRSFGEA RLFLSH+STT ILTDCLHGFLLSASIVFIFLGATSLRDYFR
Sbjct: 165  FITFWIWRLAFVRSFGEAQRLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFR 224

Query: 1076 HLXXXXXXXXXXXXXXXRNGAHAARRPPVQAN-RNFXXXXXXXXXXXXXXXXXXGQLIRR 900
            HL               RNGA AARRP  QAN RNF                  GQ+IRR
Sbjct: 225  HLRELGGQDAEREDEGDRNGARAARRPQGQANNRNFAGEANAEDAGGGQGIAGAGQIIRR 284

Query: 899  NAXXXXXXXXXXXXXXXXXXXXXXIFDGMDDADGAEDVPFDELVGMQGPVFHLVENAFTV 720
            NA                      +FDG+DDADGAEDVPFDELVGMQGPVFHLVENAFTV
Sbjct: 285  NAENVAARWEMQAARLEAHVEQ--MFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTV 342

Query: 719  LASNMIFLGVVIFVPFSLGRIIXXXXXXXXXXXXXXXXXXXXXXTESALSVANTTLKNAL 540
            LASNMIFLGVVIFVPFSLGRI+                      T++ALS+AN TLKNAL
Sbjct: 343  LASNMIFLGVVIFVPFSLGRIVLYYISWLFSSASGPLLSTVMPLTDTALSIANFTLKNAL 402

Query: 539  TEATNMSSDNHQN-LLNHVAEKLQVNATVLTDLSLNGTTPLSADLLKGAAANGASRLSDV 363
            T  TN++S+++   LL  VA+ L+VNA+ + D+S N + PLSA+L+KGAA  G SRLSDV
Sbjct: 403  TAVTNLTSEDYDGGLLGQVADMLKVNASEVNDVSKNISNPLSAELVKGAAI-GTSRLSDV 461

Query: 362  TTLAVGYMFIFSLVFFYLGIVALIRYSKGEPLTMGRFYGIASIAETIPSLFRQFLAAMRH 183
            TTLA+GYMFIFSLVFFYLGIVALIRY+KGEP+TMGRFYGIASIAETIPSLFRQFLAAMRH
Sbjct: 462  TTLAIGYMFIFSLVFFYLGIVALIRYTKGEPMTMGRFYGIASIAETIPSLFRQFLAAMRH 521

Query: 182  LLTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKSIAQRVDFFSVSPLASSLIHWVVG 3
            L+TMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKS+AQRV FFSVSPLASSL+HWVVG
Sbjct: 522  LMTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKSMAQRVQFFSVSPLASSLVHWVVG 581


>ref|XP_004136968.1| PREDICTED: E3 ubiquitin-protein ligase MARCH6-like [Cucumis sativus]
            gi|449495626|ref|XP_004159898.1| PREDICTED: E3
            ubiquitin-protein ligase MARCH6-like [Cucumis sativus]
          Length = 1098

 Score =  517 bits (1331), Expect = e-144
 Identities = 281/419 (67%), Positives = 310/419 (73%), Gaps = 1/419 (0%)
 Frame = -1

Query: 1256 FITFWIWQLVSVRSFGEAHRLFLSHVSTTAILTDCLHGFLLSASIVFIFLGATSLRDYFR 1077
            FITFWIW+L  VRSFGEA RLFLSH+S T +LTDCLHGFLLSASIVFIFLGATSLRDYFR
Sbjct: 157  FITFWIWRLAFVRSFGEAQRLFLSHLSATVVLTDCLHGFLLSASIVFIFLGATSLRDYFR 216

Query: 1076 HLXXXXXXXXXXXXXXXRNGAHAARRPPVQANRNFXXXXXXXXXXXXXXXXXXGQLIRRN 897
            HL               RNGA A RRPP QANRNF                  GQ+IRRN
Sbjct: 217  HLRELGGQDGEREDDADRNGARAVRRPPGQANRNFAGDANGEDAGGAPVLAGAGQMIRRN 276

Query: 896  AXXXXXXXXXXXXXXXXXXXXXXIFDGMDDADGAEDVPFDELVGMQGPVFHLVENAFTVL 717
            A                      +FD +DDADGAEDVPFDELVGMQGPVFHLVENAFTVL
Sbjct: 277  AENVAARWEMQAARLEAHVEQ--MFD-VDDADGAEDVPFDELVGMQGPVFHLVENAFTVL 333

Query: 716  ASNMIFLGVVIFVPFSLGRIIXXXXXXXXXXXXXXXXXXXXXXTESALSVANTTLKNALT 537
            ASNMIFLGVVIFVPF+LGRII                      TESALS+AN TLKNALT
Sbjct: 334  ASNMIFLGVVIFVPFTLGRIILHYVSWLFSSASGPVFSTMMPLTESALSLANITLKNALT 393

Query: 536  EATNMSSDNHQN-LLNHVAEKLQVNATVLTDLSLNGTTPLSADLLKGAAANGASRLSDVT 360
               N+SSD  ++ LL+ VAE L+VN++ L+D+S N T PLS DLLKGAA  G SRLSDVT
Sbjct: 394  AVANLSSDGKESGLLDQVAEMLKVNSSTLSDVSNNITAPLSVDLLKGAATGG-SRLSDVT 452

Query: 359  TLAVGYMFIFSLVFFYLGIVALIRYSKGEPLTMGRFYGIASIAETIPSLFRQFLAAMRHL 180
            TLAVGY+FIFSLVFFYLG +ALIRY++GEPLTMGR YGIASIAE IPSL RQF+AAMRHL
Sbjct: 453  TLAVGYIFIFSLVFFYLGTIALIRYTRGEPLTMGRLYGIASIAEAIPSLLRQFMAAMRHL 512

Query: 179  LTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKSIAQRVDFFSVSPLASSLIHWVVG 3
            +TM+KVAFLLVIELGVFPLMCGWWLD+CT+RMFGKS+AQRV FFS+SPLASSL+HW VG
Sbjct: 513  MTMVKVAFLLVIELGVFPLMCGWWLDICTVRMFGKSMAQRVQFFSISPLASSLVHWAVG 571


>ref|XP_002313128.1| predicted protein [Populus trichocarpa] gi|222849536|gb|EEE87083.1|
            predicted protein [Populus trichocarpa]
          Length = 1110

 Score =  516 bits (1329), Expect = e-144
 Identities = 282/420 (67%), Positives = 309/420 (73%), Gaps = 2/420 (0%)
 Frame = -1

Query: 1256 FITFWIWQLVSVRSFGEAHRLFLSHVSTTAILTDCLHGFLLSASIVFIFLGATSLRDYFR 1077
            FITFWIW+L  VRS GEA RLFLSH+STT ILTDCLHGFLLSASIVFIFLGATSLRDYFR
Sbjct: 164  FITFWIWRLAFVRSLGEAQRLFLSHISTTVILTDCLHGFLLSASIVFIFLGATSLRDYFR 223

Query: 1076 HLXXXXXXXXXXXXXXXRNGAHAARRPPVQANRNFXXXXXXXXXXXXXXXXXXGQLIRRN 897
            HL               RNGA AARRPP QANRN                   GQ+IRRN
Sbjct: 224  HLRELGGQDAEREDEGDRNGARAARRPPGQANRNVAGEVNAEDAGGAQGIAGAGQIIRRN 283

Query: 896  AXXXXXXXXXXXXXXXXXXXXXXIFDGMDDADGAEDVPFDELVGMQGPVFHLVENAFTVL 717
            A                      +FDG+DDADGAEDVPFDELVGMQGPVFHLVENAFTVL
Sbjct: 284  AENVAARWEMQAARLEAHVEQ--MFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVL 341

Query: 716  ASNMIFLGVVIFVPFSLGRIIXXXXXXXXXXXXXXXXXXXXXXTESALSVANTTLKNALT 537
            ASNMIFLG VIFVPFSLGRII                      T++ALS+AN TLKNALT
Sbjct: 342  ASNMIFLGAVIFVPFSLGRIILYYISWLFSFASVPVLSTVMPLTDTALSLANITLKNALT 401

Query: 536  EATNMSSDNHQN--LLNHVAEKLQVNATVLTDLSLNGTTPLSADLLKGAAANGASRLSDV 363
               N++S+      +L  VA+ L VNA+ L ++S N ++ LSAD+LKGA+  G SRLSDV
Sbjct: 402  AVENLTSEGEDGGGVLGQVADMLNVNASGLNEVSNNISSSLSADILKGASV-GTSRLSDV 460

Query: 362  TTLAVGYMFIFSLVFFYLGIVALIRYSKGEPLTMGRFYGIASIAETIPSLFRQFLAAMRH 183
            TTLA+GYMFIFSLVFFYLG VALIRY+KGEPLTMGRFYGIASIAETIPSLFRQFLAA RH
Sbjct: 461  TTLAIGYMFIFSLVFFYLGGVALIRYTKGEPLTMGRFYGIASIAETIPSLFRQFLAATRH 520

Query: 182  LLTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKSIAQRVDFFSVSPLASSLIHWVVG 3
            L+TMIKVAFLLVIELGVFPLMCGWWLD+CTIRMFGKS+AQRV FFS+SPLASSL+HWVVG
Sbjct: 521  LMTMIKVAFLLVIELGVFPLMCGWWLDICTIRMFGKSMAQRVQFFSISPLASSLVHWVVG 580


>ref|XP_002282447.2| PREDICTED: E3 ubiquitin-protein ligase MARCH6 [Vitis vinifera]
          Length = 1195

 Score =  511 bits (1315), Expect = e-142
 Identities = 281/419 (67%), Positives = 308/419 (73%), Gaps = 1/419 (0%)
 Frame = -1

Query: 1256 FITFWIWQLVSVRSFGEAHRLFLSHVSTTAILTDCLHGFLLSASIVFIFLGATSLRDYFR 1077
            FITFWIW+   VRSFGEA RLFLSH+STT ILTDCLHGFLLSASIVFIFLGATSLRDY R
Sbjct: 245  FITFWIWRFSFVRSFGEAQRLFLSHLSTTVILTDCLHGFLLSASIVFIFLGATSLRDYVR 304

Query: 1076 HLXXXXXXXXXXXXXXXRNGAHAARRPPVQANRNFXXXXXXXXXXXXXXXXXXGQLIRRN 897
            HL               RN   AARRPP QANRNF                  GQL  RN
Sbjct: 305  HLRELGGPDAEREDEGERN-PRAARRPPGQANRNFAREGNGEDAGGAQGIAGAGQLDGRN 363

Query: 896  AXXXXXXXXXXXXXXXXXXXXXXIFDGMDDADGAEDVPFDELVGMQGPVFHLVENAFTVL 717
                                   +FDG+DDADGAEDVPFDELVGMQGPVFHLVENAFTVL
Sbjct: 364  PDNVAVRWEMQAARLEAHVEQ--MFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVL 421

Query: 716  ASNMIFLGVVIFVPFSLGRIIXXXXXXXXXXXXXXXXXXXXXXTESALSVANTTLKNALT 537
            ASNMIFLGVVIF+PFSLGR+I                      TESALS+AN TLKNALT
Sbjct: 422  ASNMIFLGVVIFLPFSLGRVILHYISWLFSSATGPVLSTFMPLTESALSLANITLKNALT 481

Query: 536  EATNMSSDNHQN-LLNHVAEKLQVNATVLTDLSLNGTTPLSADLLKGAAANGASRLSDVT 360
              T++SS++ +N LL  VAE L+VN + L + S N + PLSAD LKGA   G SRLSDVT
Sbjct: 482  AVTDLSSESQENGLLGQVAEMLKVNTSGLNETSNNISMPLSADFLKGATI-GTSRLSDVT 540

Query: 359  TLAVGYMFIFSLVFFYLGIVALIRYSKGEPLTMGRFYGIASIAETIPSLFRQFLAAMRHL 180
            TLA+GYMF+FSL+FFYLGIVALIRY+KGEPLTMGRFYGI+SIAETIPSLFRQFLAAMRHL
Sbjct: 541  TLAIGYMFVFSLIFFYLGIVALIRYTKGEPLTMGRFYGISSIAETIPSLFRQFLAAMRHL 600

Query: 179  LTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKSIAQRVDFFSVSPLASSLIHWVVG 3
            +TMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGK+++QRV FFSVSPLASSL+HW+VG
Sbjct: 601  MTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKTLSQRVQFFSVSPLASSLVHWIVG 659


>emb|CBI32382.3| unnamed protein product [Vitis vinifera]
          Length = 1110

 Score =  511 bits (1315), Expect = e-142
 Identities = 281/419 (67%), Positives = 308/419 (73%), Gaps = 1/419 (0%)
 Frame = -1

Query: 1256 FITFWIWQLVSVRSFGEAHRLFLSHVSTTAILTDCLHGFLLSASIVFIFLGATSLRDYFR 1077
            FITFWIW+   VRSFGEA RLFLSH+STT ILTDCLHGFLLSASIVFIFLGATSLRDY R
Sbjct: 160  FITFWIWRFSFVRSFGEAQRLFLSHLSTTVILTDCLHGFLLSASIVFIFLGATSLRDYVR 219

Query: 1076 HLXXXXXXXXXXXXXXXRNGAHAARRPPVQANRNFXXXXXXXXXXXXXXXXXXGQLIRRN 897
            HL               RN   AARRPP QANRNF                  GQL  RN
Sbjct: 220  HLRELGGPDAEREDEGERN-PRAARRPPGQANRNFAREGNGEDAGGAQGIAGAGQLDGRN 278

Query: 896  AXXXXXXXXXXXXXXXXXXXXXXIFDGMDDADGAEDVPFDELVGMQGPVFHLVENAFTVL 717
                                   +FDG+DDADGAEDVPFDELVGMQGPVFHLVENAFTVL
Sbjct: 279  PDNVAVRWEMQAARLEAHVEQ--MFDGLDDADGAEDVPFDELVGMQGPVFHLVENAFTVL 336

Query: 716  ASNMIFLGVVIFVPFSLGRIIXXXXXXXXXXXXXXXXXXXXXXTESALSVANTTLKNALT 537
            ASNMIFLGVVIF+PFSLGR+I                      TESALS+AN TLKNALT
Sbjct: 337  ASNMIFLGVVIFLPFSLGRVILHYISWLFSSATGPVLSTFMPLTESALSLANITLKNALT 396

Query: 536  EATNMSSDNHQN-LLNHVAEKLQVNATVLTDLSLNGTTPLSADLLKGAAANGASRLSDVT 360
              T++SS++ +N LL  VAE L+VN + L + S N + PLSAD LKGA   G SRLSDVT
Sbjct: 397  AVTDLSSESQENGLLGQVAEMLKVNTSGLNETSNNISMPLSADFLKGATI-GTSRLSDVT 455

Query: 359  TLAVGYMFIFSLVFFYLGIVALIRYSKGEPLTMGRFYGIASIAETIPSLFRQFLAAMRHL 180
            TLA+GYMF+FSL+FFYLGIVALIRY+KGEPLTMGRFYGI+SIAETIPSLFRQFLAAMRHL
Sbjct: 456  TLAIGYMFVFSLIFFYLGIVALIRYTKGEPLTMGRFYGISSIAETIPSLFRQFLAAMRHL 515

Query: 179  LTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKSIAQRVDFFSVSPLASSLIHWVVG 3
            +TMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGK+++QRV FFSVSPLASSL+HW+VG
Sbjct: 516  MTMIKVAFLLVIELGVFPLMCGWWLDVCTIRMFGKTLSQRVQFFSVSPLASSLVHWIVG 574


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