BLASTX nr result

ID: Panax21_contig00004814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004814
         (536 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511192.1| COMM domain-containing protein, putative [Ri...    84   3e-33
emb|CAN62484.1| hypothetical protein VITISV_010812 [Vitis vinifera]    81   2e-32
ref|XP_002283737.1| PREDICTED: COMM domain-containing protein 9 ...    81   2e-32
ref|XP_003526960.1| PREDICTED: COMM domain-containing protein 9-...    76   1e-28
ref|XP_003602101.1| FAR1-related protein [Medicago truncatula] g...    74   8e-28

>ref|XP_002511192.1| COMM domain-containing protein, putative [Ricinus communis]
           gi|223550307|gb|EEF51794.1| COMM domain-containing
           protein, putative [Ricinus communis]
          Length = 201

 Score = 83.6 bits (205), Expect(3) = 3e-33
 Identities = 38/49 (77%), Positives = 44/49 (89%)
 Frame = +2

Query: 2   VYENISKDEIQKLFPAEVLPEI*RILTLLLQKFHREWQEDILKDQDTLP 148
           VYENISKDEIQKLFP+EVLPE+ R+LT+LLQKF +EWQED+ KDQ T P
Sbjct: 71  VYENISKDEIQKLFPSEVLPELQRLLTILLQKFQKEWQEDVFKDQVTFP 119



 Score = 57.0 bits (136), Expect(3) = 3e-33
 Identities = 26/37 (70%), Positives = 33/37 (89%)
 Frame = +3

Query: 255 LQSDAQLKTGEKDVKFQLAKDTIESMLKLMYCIRDQL 365
           LQ+DA  ++GE +VKFQLAKDT+E+M+K MYCIRDQL
Sbjct: 147 LQNDAPSQSGELEVKFQLAKDTLETMVKSMYCIRDQL 183



 Score = 47.0 bits (110), Expect(3) = 3e-33
 Identities = 22/27 (81%), Positives = 26/27 (96%), Gaps = 1/27 (3%)
 Frame = +1

Query: 151 LKAMTWNMANQDT-ELTDPVAVINLKI 228
           LKAMTWNMANQDT E+T+P+AVINLK+
Sbjct: 121 LKAMTWNMANQDTAEMTEPMAVINLKL 147


>emb|CAN62484.1| hypothetical protein VITISV_010812 [Vitis vinifera]
          Length = 239

 Score = 80.9 bits (198), Expect(3) = 2e-32
 Identities = 38/49 (77%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   VYENISKDEIQKLFPAEVLPEI*RILTLLLQKFHREWQEDILKDQDTLP 148
           VYENISKDEIQKLFP EVLPE+ R+LTLLLQKF REW+ED+L DQ  +P
Sbjct: 7   VYENISKDEIQKLFPDEVLPELQRLLTLLLQKFQREWREDVLNDQVIMP 55



 Score = 53.5 bits (127), Expect(3) = 2e-32
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = +3

Query: 255 LQSDAQLKTGEKDVKFQLAKDTIESMLKLMYCIRDQL 365
           LQ+DAQ  +GE +VKFQL KDT+E+MLK MY IRDQL
Sbjct: 82  LQNDAQSHSGELEVKFQLDKDTLETMLKSMYSIRDQL 118



 Score = 50.4 bits (119), Expect(3) = 2e-32
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = +1

Query: 151 LKAMTWNMANQDTELTDPVAVINLKI 228
           LKAMTWNMANQ+TE+ DPVAVINLK+
Sbjct: 57  LKAMTWNMANQETEMLDPVAVINLKL 82


>ref|XP_002283737.1| PREDICTED: COMM domain-containing protein 9 [Vitis vinifera]
           gi|297734414|emb|CBI15661.3| unnamed protein product
           [Vitis vinifera]
          Length = 200

 Score = 80.9 bits (198), Expect(3) = 2e-32
 Identities = 38/49 (77%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   VYENISKDEIQKLFPAEVLPEI*RILTLLLQKFHREWQEDILKDQDTLP 148
           VYENISKDEIQKLFP EVLPE+ R+LTLLLQKF REW+ED+L DQ  +P
Sbjct: 71  VYENISKDEIQKLFPDEVLPELQRLLTLLLQKFQREWREDVLNDQVIMP 119



 Score = 53.5 bits (127), Expect(3) = 2e-32
 Identities = 26/37 (70%), Positives = 31/37 (83%)
 Frame = +3

Query: 255 LQSDAQLKTGEKDVKFQLAKDTIESMLKLMYCIRDQL 365
           LQ+DAQ  +GE +VKFQL KDT+E+MLK MY IRDQL
Sbjct: 146 LQNDAQSHSGELEVKFQLDKDTLETMLKSMYSIRDQL 182



 Score = 50.4 bits (119), Expect(3) = 2e-32
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = +1

Query: 151 LKAMTWNMANQDTELTDPVAVINLKI 228
           LKAMTWNMANQ+TE+ DPVAVINLK+
Sbjct: 121 LKAMTWNMANQETEMLDPVAVINLKL 146


>ref|XP_003526960.1| PREDICTED: COMM domain-containing protein 9-like [Glycine max]
          Length = 192

 Score = 75.9 bits (185), Expect(3) = 1e-28
 Identities = 33/49 (67%), Positives = 43/49 (87%)
 Frame = +2

Query: 2   VYENISKDEIQKLFPAEVLPEI*RILTLLLQKFHREWQEDILKDQDTLP 148
           VYEN SK++I KLFP+EVLPE+ ++LTLLL KF REWQED++KDQ+ +P
Sbjct: 71  VYENTSKEDIPKLFPSEVLPELQKLLTLLLHKFQREWQEDVMKDQNIVP 119



 Score = 52.0 bits (123), Expect(3) = 1e-28
 Identities = 23/36 (63%), Positives = 30/36 (83%)
 Frame = +3

Query: 255 LQSDAQLKTGEKDVKFQLAKDTIESMLKLMYCIRDQ 362
           LQ+D Q  +GE+DVKF+LA D+I+ MLK M+CIRDQ
Sbjct: 146 LQNDGQFHSGEQDVKFKLATDSIDMMLKAMHCIRDQ 181



 Score = 44.3 bits (103), Expect(3) = 1e-28
 Identities = 20/26 (76%), Positives = 21/26 (80%)
 Frame = +1

Query: 151 LKAMTWNMANQDTELTDPVAVINLKI 228
           LKAMTWNMAN D E  DP AVINLK+
Sbjct: 121 LKAMTWNMANLDKESADPAAVINLKL 146


>ref|XP_003602101.1| FAR1-related protein [Medicago truncatula]
           gi|355491149|gb|AES72352.1| FAR1-related protein
           [Medicago truncatula]
          Length = 193

 Score = 73.6 bits (179), Expect(3) = 8e-28
 Identities = 32/49 (65%), Positives = 42/49 (85%)
 Frame = +2

Query: 2   VYENISKDEIQKLFPAEVLPEI*RILTLLLQKFHREWQEDILKDQDTLP 148
           VYEN  KD+  KLFP+EVLPE+ ++LTLLLQKF ++WQED+LKDQ+ +P
Sbjct: 71  VYENTCKDDYPKLFPSEVLPELQKLLTLLLQKFQQQWQEDVLKDQNIVP 119



 Score = 50.1 bits (118), Expect(3) = 8e-28
 Identities = 22/26 (84%), Positives = 25/26 (96%)
 Frame = +1

Query: 151 LKAMTWNMANQDTELTDPVAVINLKI 228
           LKAMTWNMA+QDTEL+DP AVINLK+
Sbjct: 121 LKAMTWNMADQDTELSDPTAVINLKL 146



 Score = 45.4 bits (106), Expect(3) = 8e-28
 Identities = 21/36 (58%), Positives = 29/36 (80%)
 Frame = +3

Query: 255 LQSDAQLKTGEKDVKFQLAKDTIESMLKLMYCIRDQ 362
           LQ+DA+  +GE D+KFQLA D++E MLK M+ +RDQ
Sbjct: 146 LQNDARFHSGELDLKFQLATDSVEMMLKEMHNMRDQ 181


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