BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Panax21_contig00004806
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146173.1| PREDICTED: HMG1/2-like protein-like [Cucumis...   117   1e-24
gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirs...   116   2e-24
gb|ADM47612.1| high mobility group protein [Hevea brasiliensis]       115   5e-24
ref|XP_002272299.1| PREDICTED: high mobility group-like isoform ...   115   5e-24
ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus...   114   1e-23

>ref|XP_004146173.1| PREDICTED: HMG1/2-like protein-like [Cucumis sativus]
           gi|449495123|ref|XP_004159740.1| PREDICTED: HMG1/2-like
           protein-like [Cucumis sativus]
           gi|63020536|gb|AAY26151.1| high mobility group protein
           [Cucumis sativus]
          Length = 146

 Score =  117 bits (292), Expect = 1e-24
 Identities = 57/100 (57%), Positives = 73/100 (73%)
 Frame = -1

Query: 520 PKEEIKRPQVKSVEISEGSDQATDDSDYDIPKRPSSAFFVFMESFRESYMKEHPNNKFIS 341
           PK+   + + KS   S+ S +A  D +   PKRP+SAFFVFME FR+ Y KEHPNNK ++
Sbjct: 10  PKKTDTKLKSKSAGASKKSAKAAKDPNK--PKRPASAFFVFMEEFRKQYKKEHPNNKSVA 67

Query: 340 VVAKAGGDKWKSMSEAEKAPFVAKAERRKADYDNHMMAYN 221
            V KAGGDKWKSMS+AEKAP++ KAE+RK +Y+  M AYN
Sbjct: 68  AVGKAGGDKWKSMSDAEKAPYINKAEKRKTEYNKSMQAYN 107


>gb|ADO34795.1| high mobility group box 1 protein [Gossypium hirsutum]
          Length = 142

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/89 (60%), Positives = 66/89 (74%)
 Frame = -1

Query: 487 SVEISEGSDQATDDSDYDIPKRPSSAFFVFMESFRESYMKEHPNNKFISVVAKAGGDKWK 308
           SV+   G        D + PKRP+SAFFVFME FRE Y K+HP NK ++ V KAGGDKWK
Sbjct: 16  SVKSKAGKKSGKAAKDPNKPKRPASAFFVFMEEFREQYKKDHPKNKSVAAVGKAGGDKWK 75

Query: 307 SMSEAEKAPFVAKAERRKADYDNHMMAYN 221
           S+SEAEKAP+VAKAE+RK +Y+ +M AYN
Sbjct: 76  SLSEAEKAPYVAKAEKRKVEYEKNMKAYN 104


>gb|ADM47612.1| high mobility group protein [Hevea brasiliensis]
          Length = 146

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/90 (61%), Positives = 68/90 (75%)
 Frame = -1

Query: 490 KSVEISEGSDQATDDSDYDIPKRPSSAFFVFMESFRESYMKEHPNNKFISVVAKAGGDKW 311
           K  + S+ S +A  D +   PKRP+SAFFVFME FRE Y KEHP NK ++ V KAGGDKW
Sbjct: 21  KPAKASKKSGKAAKDPNK--PKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDKW 78

Query: 310 KSMSEAEKAPFVAKAERRKADYDNHMMAYN 221
           KS+SEAEKAP+VAKAE+RK +Y+  + AYN
Sbjct: 79  KSLSEAEKAPYVAKAEKRKVEYEKKLKAYN 108


>ref|XP_002272299.1| PREDICTED: high mobility group-like isoform 1 [Vitis vinifera]
           gi|359491843|ref|XP_003634333.1| PREDICTED: high
           mobility group-like isoform 2 [Vitis vinifera]
           gi|297745562|emb|CBI40727.3| unnamed protein product
           [Vitis vinifera]
          Length = 153

 Score =  115 bits (287), Expect = 5e-24
 Identities = 52/74 (70%), Positives = 64/74 (86%)
 Frame = -1

Query: 442 DYDIPKRPSSAFFVFMESFRESYMKEHPNNKFISVVAKAGGDKWKSMSEAEKAPFVAKAE 263
           D + PKRP+SAFFVFME FR+ Y ++HP+NK +SVV KAGGDKWKSMSEAEKAP+VAKAE
Sbjct: 40  DPNKPKRPASAFFVFMEEFRKQYKEKHPSNKSVSVVGKAGGDKWKSMSEAEKAPYVAKAE 99

Query: 262 RRKADYDNHMMAYN 221
           +RK +Y+ +M AYN
Sbjct: 100 KRKVEYEKNMKAYN 113


>ref|XP_002510689.1| DNA-binding protein MNB1B, putative [Ricinus communis]
           gi|223551390|gb|EEF52876.1| DNA-binding protein MNB1B,
           putative [Ricinus communis]
          Length = 145

 Score =  114 bits (284), Expect = 1e-23
 Identities = 54/90 (60%), Positives = 69/90 (76%)
 Frame = -1

Query: 490 KSVEISEGSDQATDDSDYDIPKRPSSAFFVFMESFRESYMKEHPNNKFISVVAKAGGDKW 311
           K V+ ++ + +A  D +   PKRP+SAFFVFME FRE Y KEHP NK ++ V KAGGD+W
Sbjct: 20  KPVKATKKAGKAAKDPNK--PKRPASAFFVFMEEFREQYKKEHPKNKSVAAVGKAGGDRW 77

Query: 310 KSMSEAEKAPFVAKAERRKADYDNHMMAYN 221
           KSMSE+EKAPFVAKAE+RK +Y+  + AYN
Sbjct: 78  KSMSESEKAPFVAKAEKRKIEYEKKLKAYN 107